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  1. Article › Research › Peer-reviewed

  2. 5'-Deoxyribose Phosphate Lyase Activity of Apurinic/Apyrimidinic Endonuclease 1

    Ilina, E. S., Lavrik, O. I. & Khodyreva, S. N., Mar 2021, In: Molecular Biology. 55, 2, p. 234-240 7 p.

    Research output: Contribution to journal › Article › peer-review

  3. 5'‑дезоксирибозофатлиазная активность апуриновой/апиримидиновой эндонуклеазы 1

    Ilina, E. S., Lavrik, O. I. & Khodyreva, S. N., 1 Mar 2021, In: Molekuliarnaia biologiia. 55, 2, p. 269-276 8 p.

    Research output: Contribution to journal › Article › peer-review

  4. A comprehensive analysis of the computed tautomer fractions of the imidazole ring of histidines in Loligo vulgaris

    Vorobjev, Y. N., Scheraga, H. A. & Vila, J. A., 24 Sept 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 12, p. 3094-3105 12 p.

    Research output: Contribution to journal › Article › peer-review

  5. Activity of Human Apurinic/Apyrimidinic Endonuclease APE1 Toward Damaged DNA and Native RNA With Non-canonical Structures

    Davletgildeeva, A. T., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 30 Oct 2020, In: Frontiers in Cell and Developmental Biology. 8, 14 p., 590848.

    Research output: Contribution to journal › Article › peer-review

  6. A distinct serum protein pattern in patients with paranoid schizophrenia

    Alekseeva, I. V., Timofeyeva, N. A., Ivanova, S. A., Simutkin, G. G., Semke, A. V., Losenkov, I. S., Bokhan, N. A., Fedorova, O. S. & Chernonosov, A. A., 1 Dec 2017, In: Physiology and Pharmacology (Iran). 21, 4, p. 304-311 8 p.

    Research output: Contribution to journal › Article › peer-review

  7. A fresh look at the structural diversity of dibenzoylmethanide complexes of lanthanides

    Sukhikh, T. S., Kolybalov, D. S., Pylova, E. K., Bashirov, D. A., Komarov, V. Y., Kuratieva, N. V., Smolentsev, A. I., Fitch, A. N. & Konchenko, S. N., 7 Jul 2019, In: New Journal of Chemistry. 43, 25, p. 9934-9942 9 p.

    Research output: Contribution to journal › Article › peer-review

  8. A Method for Assessing the Efficiency of the Nucleotide Excision Repair System Ex Vivo

    Popov, A. A., Orishchenko, K. E., Naumenko, K. N., Evdokimov, A. N., Petruseva, I. O. & Lavrik, O. I., Sept 2021, In: Acta Naturae. 13, 3, p. 122-125 4 p., 13.

    Research output: Contribution to journal › Article › peer-review

  9. Analysis of peptides and small proteins in preparations of horse milk exosomes, purified on anti-CD81-Sepharose

    Sedykh, S. E., Purvinish, L. V., Burkova, E. E., Dmitrenok, P. S., Vlassov, V. V., Ryabchikova, E. I. & Nevinsky, G. A., Jun 2021, In: International Dairy Journal. 117, 104994.

    Research output: Contribution to journal › Article › peer-review

  10. An Assay for the Activity of Base Excision Repair Enzymes in Cellular Extracts Using Fluorescent DNA Probes

    Kladova, O. A., Iakovlev, D. A., Groisman, R., Ishchenko, A. A., Saparbaev, M. K., Fedorova, O. S. & Kuznetsov, N. A., 1 Apr 2020, In: Biochemistry (Moscow). 85, 4, p. 480-489 10 p.

    Research output: Contribution to journal › Article › peer-review

  11. A New DNA Break Repair Pathway Involving PARP3 and Base Excision Repair Proteins

    Belousova, E. A., Kutuzov, M. M., Ivankina, P. A., Ishchenko, A. A. & Lavrik, O. I., 1 Sept 2018, In: Doklady Biochemistry and Biophysics. 482, 1, p. 233-237 5 p.

    Research output: Contribution to journal › Article › peer-review

  12. A novel class of tyrosyl-DNA phosphodiesterase 1 inhibitors that contains the octahydro-2H-chromen-4-ol scaffold

    Li-Zhulanov, N. S., Zakharenko, A. L., Chepanova, A. A., Patel, J., Zafar, A., Volcho, K. P., Salakhutdinov, N. F., Reynisson, J., Leung, I. K. H. & Lavrik, O. I., 26 Sept 2018, In: Molecules. 23, 10, 14 p., 2468.

    Research output: Contribution to journal › Article › peer-review

  13. Antimetastatic Activity of Combined Topotecan and Tyrosyl-DNA Phosphodiesterase-1 Inhibitor on Modeled Lewis Lung Carcinoma

    Koldysheva, E. V., Men’shchikova, A. P., Lushnikova, E. L., Popova, N. A., Kaledin, V. I., Nikolin, V. P., Zakharenko, A. L., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., 15 Mar 2019, In: Bulletin of Experimental Biology and Medicine. 166, 5, p. 661-666 6 p.

    Research output: Contribution to journal › Article › peer-review

  14. Antitumor Activity of the Combination of Topotecan and Tyrosyl-DNA-Phosphodiesterase 1 Inhibitor on Model Krebs-2 Mouse Ascite Carcinoma

    Dyrkheeva, N. S., Zakharenko, A. L., Novoselova, E. S., Chepanova, A. A., Popova, N. A., Nikolin, V. P., Luzina, O. A., Salakhutdinov, N. F., Ryabchikova, E. I. & Lavrik, O. I., Mar 2021, In: Molecular Biology. 55, 2, p. 273-277 5 p.

    Research output: Contribution to journal › Article › peer-review

  15. Apurinic/Apyrimidinic Endonuclease 1 and Tyrosyl-DNA Phosphodiesterase 1 Prevent Suicidal Covalent DNA-Protein Crosslink at Apurinic/Apyrimidinic Site

    Lebedeva, N. A., Rechkunova, N. I., Endutkin, A. V. & Lavrik, O. I., 11 Jan 2021, In: Frontiers in Cell and Developmental Biology. 8, 8 p., 617301.

    Research output: Contribution to journal › Article › peer-review

  16. A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity

    Kurgina, T. A., Anarbaev, R. O., Sukhanova, M. V. & Lavrik, O. I., 15 Mar 2018, In: Analytical Biochemistry. 545, p. 91-97 7 p.

    Research output: Contribution to journal › Article › peer-review

  17. Autoimmunity and immune system dysregulation in schizophrenia: IgGs from sera of patients hydrolyze myelin basic protein

    Parshukova, D., Smirnova, L. P., Ermakov, E. A., Bokhan, N. A., Semke, A. V., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 Feb 2019, In: Journal of Molecular Recognition. 32, 2, 13 p., e2759.

    Research output: Contribution to journal › Article › peer-review

  18. A versatile strategy for the design and synthesis of novel ADP conjugates and their evaluation as potential poly(ADP-ribose) polymerase 1 inhibitors

    Sherstyuk, Y. V., Zakharenko, A. L., Kutuzov, M. M., Chalova, P. V., Sukhanova, M. V., Lavrik, O. I., Silnikov, V. N. & Abramova, T. V., 1 Feb 2017, In: Molecular Diversity. 21, 1, p. 101-113 13 p.

    Research output: Contribution to journal › Article › peer-review

  19. Biotin-decorated anti-cancer nucleotide theranostic conjugate of human serum albumin: Where the seed meets the soil?

    Popova, T. V., Khan, H., Chubarov, A. S., Lisitskiy, V. A., Antonova, N. M., Akulov, A. E., Shevelev, O. B., Zavjalov, E. L., Silnikov, V. N., Ahmad, S. & Godovikova, T. S., 1 Feb 2018, In: Bioorganic and Medicinal Chemistry Letters. 28, 3, p. 260-264 5 p.

    Research output: Contribution to journal › Article › peer-review

  20. Blood-Derived RNA- and microRNA-Hydrolyzing IgG Antibodies in Schizophrenia Patients

    Ermakov, E. A., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 May 2018, In: Biochemistry (Moscow). 83, 5, p. 507-526 20 p.

    Research output: Contribution to journal › Article › peer-review

  21. Catalase activity of IgG antibodies from the sera of healthy donors and patients with schizophrenia

    Ermakov, E. A., Smirnova, L. P., Bokhan, N. A., Semke, A. V., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 Sept 2017, In: PLoS ONE. 12, 9, p. e0183867 25 p., e0183867.

    Research output: Contribution to journal › Article › peer-review

  22. Changes in cell differentiation and proliferation lead to production of abzymes in EAE mice treated with DNA–Histone complexes

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sedykh, S. E., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2018, In: Journal of Cellular and Molecular Medicine. 22, 12, p. 5816-5832 17 p.

    Research output: Contribution to journal › Article › peer-review

  23. Changes in haematopoietic progenitor colony differentiation and proliferation and the production of different abzymes in EAE mice treated with DNA

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sennikov, S. V., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2017, In: Journal of Cellular and Molecular Medicine. 21, 12, p. 3795-3809 15 p.

    Research output: Contribution to journal › Article › peer-review

  24. Characterization of DNA ADP-ribosyltransferase activities of PARP2 and PARP3: New insights into DNA ADP-ribosylation

    Zarkovic, G., Belousova, E. A., Talhaoui, I., Saint-Pierre, C., Kutuzov, M. M., Matkarimov, B. T., Biard, D., Gasparutto, D., Lavrik, O. I. & Ishchenko, A. A., 16 Mar 2018, In: Nucleic Acids Research. 46, 5, p. 2417-2431 15 p.

    Research output: Contribution to journal › Article › peer-review

  25. Characterization of the Altai Maral Chymosin Gene, Production of a Chymosin Recombinant Analog in the Prokaryotic Expression System, and Analysis of Its Several Biochemical Properties

    Belenkaya, S. V., Bondar, A. A., Kurgina, T. A., Elchaninov, V. V., Bakulina, A. Y., Rukhlova, E. A., Lavrik, O. I., Ilyichev, A. A. & Shcherbakov, D. N., 1 Jul 2020, In: Biochemistry (Moscow). 85, 7, p. 781-791 11 p.

    Research output: Contribution to journal › Article › peer-review

  26. Comparative Analysis of Nucleotide Fluorescent Analogs for Registration of DNA Conformational Changes Induced by Interaction with Formamidopyrimidine-DNA Glycosylase Fpg

    Kuznetsova, A. A., Kladova, O. A., Barthes, N. P. F., Michel, B. Y., Burger, A., Fedorova, O. S. & Kuznetsov, N. A., 1 Nov 2019, In: Russian Journal of Bioorganic Chemistry. 45, 6, p. 591-598 8 p.

    Research output: Contribution to journal › Article › peer-review

  27. Comparative Analysis of the Activity of the Polymorphic Variants of Human Uracil-DNA-Glycosylases SMUG1 and MBD4

    Alekseeva, I., Bakman, A. S., Iakovlev, D. A., Kuznetsov, N. A. & Fedorova, O. S., Mar 2021, In: Molecular Biology. 55, 2, p. 241-251 11 p.

    Research output: Contribution to journal › Article › peer-review

  28. Comprehensive analysis of telomerase inhibition by gallotannin

    Savelyev, N., Baykuzina, P., Dokudovskaya, S., Lavrik, O., Rubtsova, M. & Dontsova, O., 10 Apr 2018, In: Oncotarget. 9, 27, p. 18712-18719 8 p.

    Research output: Contribution to journal › Article › peer-review

  29. Conformational Dynamics of Damage Processing by Human DNA Glycosylase NEIL1

    Kladova, O. A., Grin, I. R., Fedorova, O. S., Kuznetsov, N. A. & Zharkov, D. O., 15 Mar 2019, In: Journal of Molecular Biology. 431, 6, p. 1098-1112 15 p.

    Research output: Contribution to journal › Article › peer-review

  30. Conformational Dynamics of Dioxygenase AlkB and DNA in the Course of Catalytically Active Enzyme–Substrate Complex Formation

    Kanazhevskaya, L. Y., Smyshlyaev, D. A., Alekseeva, I. V. & Fedorova, O. S., 1 Nov 2019, In: Russian Journal of Bioorganic Chemistry. 45, 6, p. 630-640 11 p.

    Research output: Contribution to journal › Article › peer-review

  31. Coupled molecular dynamics and continuum electrostatic method to compute the ionization pKa’s of proteins as a function of pH. Test on a large set of proteins

    Vorobjev, Y. N., Scheraga, H. A. & Vila, J. A., 17 Feb 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 3, p. 561-574 14 p.

    Research output: Contribution to journal › Article › peer-review

  32. Dehydroabietylamine-based thiazolidin-4-ones and 2-thioxoimidazolidin-4-ones as novel tyrosyl-DNA phosphodiesterase 1 inhibitors

    Kovaleva, K., Mamontova, E., Yarovaya, O., Zakharova, O., Zakharenko, A., Lavrik, O. & Salakhutdinov, N., Nov 2021, In: Molecular Diversity. 25, 4, p. 2389-2397 9 p.

    Research output: Contribution to journal › Article › peer-review

  33. Dehydroabietylamine Ureas and Thioureas as Tyrosyl-DNA Phosphodiesterase 1 Inhibitors That Enhance the Antitumor Effect of Temozolomide on Glioblastoma Cells

    Kovaleva, K., Oleshko, O., Mamontova, E., Yarovaya, O., Zakharova, O., Zakharenko, A., Kononova, A., Dyrkheeva, N., Cheresiz, S., Pokrovsky, A., Lavrik, O. & Salakhutdinov, N., 27 Sept 2019, In: Journal of Natural Products. 82, 9, p. 2443-2450 8 p.

    Research output: Contribution to journal › Article › peer-review

  34. Design of an Efficient Inhibitor for the Influenza A Virus M2 Ion Channel

    Vorobjev, Y. N., 1 Mar 2020, In: Molecular Biology. 54, 2, p. 281-291 11 p.

    Research output: Contribution to journal › Article › peer-review

  35. Design, Synthesis, and Biological Investigation of Novel Classes of 3-Carene-Derived Potent Inhibitors of TDP1

    Il'ina, I. V., Dyrkheeva, N. S., Zakharenko, A. L., Sidorenko, A. Y., Li-Zhulanov, N. S., Korchagina, D. V., Chand, R., Ayine-Tora, D. M., Chepanova, A. A., Zakharova, O. D., Ilina, E. S., Reynisson, J., Malakhova, A. A., Medvedev, S. P., Zakian, S. M., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., Aug 2020, In: Molecules (Basel, Switzerland). 25, 15, 22 p., 3496.

    Research output: Contribution to journal › Article › peer-review

  36. DNA Bearing Bulky Fluorescent and Photoreactive Damage in Both Strands as Substrates of the Nucleotide Excision Repair System

    Lukyanchikova, N. V., Petruseva, I. O., Evdokimov, A. N., Koroleva, L. S. & Lavrik, O. I., 1 Mar 2018, In: Molecular Biology. 52, 2, p. 237-246 10 p.

    Research output: Contribution to journal › Article › peer-review

  37. DNA Bearing Bulky Fluorescent and Photoreactive Damage in Both Strands as Substrates of the Nucleotide Excision Repair System

    Lukyanchikova, N. V., Petruseva, I. O., Evdokimov, A. N., Koroleva, L. S. & Lavrik, O. I., 27 Apr 2018, In: Molekuliarnaia biologiia. 52, 2, p. 277-288 12 p.

    Research output: Contribution to journal › Article › peer-review

  38. DNA complexes with human apurinic/apyrimidinic endonuclease 1: structural insights revealed by pulsed dipolar EPR with orthogonal spin labeling

    Krumkacheva, O. A., Shevelev, G. Y., Lomzov, A. A., Dyrkheeva, N. S., Kuzhelev, A. A., Koval, V. V., Tormyshev, V. M., Polienko, Y. F., Fedin, M. V., Pyshnyi, D. V., Lavrik, O. I. & Bagryanskaya, E. G., 5 Sept 2019, In: Nucleic Acids Research. 47, 15, p. 7767-7780 14 p.

    Research output: Contribution to journal › Article › peer-review

  39. DNA is a New Target of Parp3

    Belousova, E. A., Ishchenko, A. A. & Lavrik, O. I., 8 Mar 2018, In: Scientific Reports. 8, 1, p. 4176 12 p., 4176.

    Research output: Contribution to journal › Article › peer-review

  40. Double-Stranded DNA Fragments Bearing Unrepairable Lesions and Their Internalization into Mouse Krebs-2 Carcinoma Cells

    Dolgova, E. V., Evdokimov, A. N., Proskurina, A. S., Efremov, Y. R., Bayborodin, S. I., Potter, E. A., Popov, A. A., Petruseva, I. O., Lavrik, O. I. & Bogachev, S. S., 1 Oct 2019, In: Nucleic Acid Therapeutics. 29, 5, p. 278-290 13 p.

    Research output: Contribution to journal › Article › peer-review

  41. Dual function of HPF1 in the modulation of PARP1 and PARP2 activities

    Kurgina, T. A., Moor, N. A., Kutuzov, M. M., Naumenko, K. N., Ukraintsev, A. A. & Lavrik, O. I., Dec 2021, In: Communications Biology. 4, 1, 1259.

    Research output: Contribution to journal › Article › peer-review

  42. Dynamic light scattering study of base excision DNA repair proteins and their complexes

    Vasil'eva, I. A., Anarbaev, R. O., Moor, N. A. & Lavrik, O. I., 1 Mar 2019, In: Biochimica et Biophysica Acta - Proteins and Proteomics. 1867, 3, p. 297-305 9 p.

    Research output: Contribution to journal › Article › peer-review

  43. Effective Inhibitors of Tyrosyl-DNA Phosphodiesterase 1 Based on Monoterpenoids as Potential Agents for Antitumor Therapy

    Chepanova, A. A., Li-Zhulanov, N. S., Sukhikh, A. S., Zafar, A., Reynisson, J., Zakharenko, A. L., Zakharova, O. D., Korchagina, D. V., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Nov 2019, In: Russian Journal of Bioorganic Chemistry. 45, 6, p. 647-655 9 p.

    Research output: Contribution to journal › Article › peer-review

  44. Effect of Human XRCC1 Protein Oxidation on the Functional Activity of Its Complexes with the Key Enzymes of DNA Base Excision Repair

    Vasil’eva, I. A., Moor, N. A. & Lavrik, O. I., 22 Mar 2020, In: Biochemistry (Moscow). 85, 3, p. 288-299 12 p.

    Research output: Contribution to journal › Article › peer-review

  45. Evaluation of antioxidant activity and cytotoxicity of polyfluorinated diarylacetylenes and indoles toward human cancer cells

    Zakharova, O., Nevinsky, G., Politanskaya, L., Baev, D., Ovchinnikova, L. & Tretyakov, E., 1 Oct 2019, In: Journal of Fluorine Chemistry. 226, 12 p., 109353.

    Research output: Contribution to journal › Article › peer-review

  46. Evolution of inhibitor-resistant natural mutant forms of HIV-1 protease probed by pre-steady state kinetic analysis

    Zakharova, M. Y., Kuznetsova, A. A., Kaliberda, E. N., Dronina, M. A., Kolesnikov, A. V., Kozyr, A. V., Smirnov, I. V., Rumsh, L. D., Fedorova, O. S., Knorre, D. G., Gabibov, A. G. & Kuznetsov, N. A., 1 Nov 2017, In: Biochimie. 142, p. 125-134 10 p.

    Research output: Contribution to journal › Article › peer-review

  47. Excision of Carbohydrate-Modified dNMP Analogues from DNA 3' end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)

    Dyrkheeva, N. S., Lebedeva, N. A., Sherstyuk, Y. V., Abramova, T. V., Silnikov, V. N. & Lavrik, O. I., 1 Nov 2018, In: Molecular Biology. 52, 6, p. 922-928 7 p.

    Research output: Contribution to journal › Article › peer-review

  48. Excision of Carbohydrate-Modified dNMP Analogues from DNA 3' end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)

    Dyrkheeva, N. S., Lebedeva, N. A., Sherstyuk, Y. V., Abramova, T. V., Silnikov, V. N. & Lavrik, O. I., 1 Nov 2018, In: Molekuliarnaia biologiia. 52, 6, p. 1066-1073 8 p.

    Research output: Contribution to journal › Article › peer-review

  49. Extremely stable high molecular mass soluble multiprotein complex from eggs of sea urchin Strongylocentrotus intermedius with phosphatase activity

    Soboleva, S. E., Burkova, E. E., Dmitrenok, P. S., Bulgakov, D. V., Menzorova, N. I., Buneva, V. N. & Nevinsky, G. A., 1 Dec 2018, In: Journal of Molecular Recognition. 31, 12, 12 p., e2753.

    Research output: Contribution to journal › Article › peer-review

  50. Functional role of N-terminal extension of human ap endonuclease 1 in coordination of base excision dna repair via protein–protein interactions

    Moor, N., Vasil’eva, I. & Lavrik, O., 28 Apr 2020, In: International Journal of Molecular Sciences. 21, 9, 18 p., 3122.

    Research output: Contribution to journal › Article › peer-review

  51. Genome Stability Maintenance in Naked aMole-Rat

    Petruseva, I. O., Evdokimov, A. N. & Lavrik, O. I., 2017, In: Acta Naturae. 9, 4, p. 31-41 11 p., 4.

    Research output: Contribution to journal › Article › peer-review

  52. Global DNA dynamics of 8-oxoguanine repair by human OGG1 revealed by stopped-flow kinetics and molecular dynamics simulation

    Lukina, M. V., Koval, V. V., Lomzov, A. A., Zharkov, D. O. & Fedorova, O. S., 1 Oct 2017, In: Molecular BioSystems. 13, 10, p. 1954-1966 13 p.

    Research output: Contribution to journal › Article › peer-review

  53. How human IgGs against myelin basic protein (MBP) recognize oligopeptides and MBP

    Belov, S., Buneva, V. N. & Nevinsky, G. A., 1 Oct 2017, In: Journal of Molecular Recognition. 30, 10, 12 p., 2637.

    Research output: Contribution to journal › Article › peer-review

  54. Human Tyrosyl-DNA Phosphodiesterase 1 Possesses Transphosphooligonucleotidation Activity With Primary Alcohols

    Dyrkheeva, N., Anarbaev, R., Lebedeva, N., Kuprushkin, M., Kuznetsova, A., Kuznetsov, N., Rechkunova, N. & Lavrik, O., 23 Dec 2020, In: Frontiers in Cell and Developmental Biology. 8, 12 p., 604732.

    Research output: Contribution to journal › Article › peer-review

  55. Identification of novel inhibitors for the tyrosyl-DNA-phosphodiesterase 1 (Tdp1) mutant SCAN1 using virtual screening

    Mamontova, E. M., Zakharenko, A. L., Zakharova, O. D., Dyrkheeva, N. S., Volcho, K. P., Reynisson, J., Arabshahi, H. J., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2020, In: Bioorganic and Medicinal Chemistry. 28, 1, 11 p., 115234.

    Research output: Contribution to journal › Article › peer-review

  56. IgGs-abzymes from the sera of patients with systemic lupus erythematosus hydrolyzed miRNAs

    Ermakov, E. A., Kabirova, E. M., Sizikov, A. E., Buneva, V. N. & Nevinsky, G. A., 2020, In: Journal of Inflammation Research. 13, p. 681-699 19 p.

    Research output: Contribution to journal › Article › peer-review

  57. Inhibition of tyrosyl-DNA phosphodiesterase 1 by lipophilic pyrimidine nucleosides

    Zakharenko, A. L., Drenichev, M. S., Dyrkheeva, N. S., Ivanov, G. A., Oslovsky, V. E., Ilina, E. S., Chernyshova, I. A., Lavrik, O. I. & Mikhailov, S. N., 13 Aug 2020, In: Molecules. 25, 16, 13 p., 3694.

    Research output: Contribution to journal › Article › peer-review

  58. Inhibitory Effect of New Semisynthetic Usnic Acid Derivatives on Human Tyrosyl-DNA Phosphodiesterase 1

    Dyrkheeva, N., Luzina, O., Filimonov, A., Zakharova, O., Ilina, E., Zakharenko, A., Kuprushkin, M., Nilov, D., Gushchina, I., Švedas, V., Salakhutdinov, N. & Lavrik, O., 1 Jan 2019, In: Planta Medica. 85, 2, p. 103-111 9 p.

    Research output: Contribution to journal › Article › peer-review

  59. Interaction features of adenine DNA glycosylase MutY from E. coli with DNA substrates

    Tyugashev, T. E., Kuznetsova, A. A., Kuznetsov, N. A. & Fedorova, O. S., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 13-22 10 p.

    Research output: Contribution to journal › Article › peer-review

  60. Kinetic features of 30-50 exonuclease activity of human AP-endonuclease ape1

    Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 21 Aug 2018, In: Molecules. 23, 9, 14 p., 2101.

    Research output: Contribution to journal › Article › peer-review

  61. Kinetics and thermodynamics of DNA processing by wild type DNA-glycosylase endo III and its catalytically inactive mutant forms

    Kladova, O. A., Krasnoperov, L. N., Kuznetsov, N. A. & Fedorova, O. S., 30 Mar 2018, In: Genes. 9, 4, 18 p., 190.

    Research output: Contribution to journal › Article › peer-review

  62. Lesion Recognition and Cleavage of Damage-Containing Quadruplexes and Bulged Structures by DNA Glycosylases

    Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 30 Nov 2020, In: Frontiers in Cell and Developmental Biology. 8, 16 p., 595687.

    Research output: Contribution to journal › Article › peer-review

  63. Modulation of the apurinic/apyrimidinic endonuclease activity of human APE1 and of its natural polymorphic variants by base excision repair proteins

    Kladova, O. A., Alekseeva, I. V., Saparbaev, M., Fedorova, O. S. & Kuznetsov, N. A., 1 Oct 2020, In: International Journal of Molecular Sciences. 21, 19, p. 1-15 15 p., 7147.

    Research output: Contribution to journal › Article › peer-review

  64. Molecular dynamics simulation of the opposite-base preference and interactions in the active site of formamidopyrimidine-DNA glycosylase

    Popov, A. V., Endutkin, A. V., Vorobjev, Y. N. & Zharkov, D. O., 8 May 2017, In: BMC Structural Biology. 17, 1, p. 1-19 19 p., 5.

    Research output: Contribution to journal › Article › peer-review

  65. Molecular mechanisms of PARP-1 inhibitor 7-methylguanine

    Nilov, D., Maluchenko, N., Kurgina, T., Pushkarev, S., Lys, A., Kutuzov, M., Gerasimova, N., Feofanov, A., Švedas, V., Lavrik, O. & Studitsky, V. M., Mar 2020, In: International Journal of Molecular Sciences. 21, 6, 11 p., 2159.

    Research output: Contribution to journal › Article › peer-review

  66. Mutational and kinetic analysis of lesion recognition by Escherichia coli endonuclease VIII

    Kladova, O. A., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 13 May 2017, In: Genes. 8, 5, 13 p., 140.

    Research output: Contribution to journal › Article › peer-review

  67. Natural catalytic IgGs hydrolyzing histones in schizophrenia: Are they the link between humoral immunity and inflammation?

    Ermakov, E. A., Parshukova, D. A., Nevinsky, G. A. & Buneva, V. N., 30 Sept 2020, In: International Journal of Molecular Sciences. 21, 19, p. 1-25 25 p., 7238.

    Research output: Contribution to journal › Article › peer-review

  68. Neural response to catecholamine depletion in remitted bulimia nervosa: Relation to depression and relapse

    Ermakov, E., Smirnova, L., Ivanova, S., Zaharova, O., Buneva, V. & Nevinsky, G., 1 Jul 2017, In: European Neuropsychopharmacology. 27, 7, p. 633-646 14 p.

    Research output: Contribution to journal › Article › peer-review

  69. New Fluorescent Analogs of Nucleotides Based on 3-Hydroxychromone for Recording Conformational Changes of DNA

    Kladova, O. A., Kuznetsova, A. A., Barthes, N. P. F., Michel, B. Y., Burger, A., Fedorova, O. S. & Kuznetsov, N. A., 1 Nov 2019, In: Russian Journal of Bioorganic Chemistry. 45, 6, p. 599-607 9 p.

    Research output: Contribution to journal › Article › peer-review

  70. New hydrazinothiazole derivatives of usnic acid as potent TDP1 inhibitors

    Filimonov, A. S., Chepanova, A. A., Luzina, O. A., Zakharenko, A. L., Zakharova, O. D., Ilina, E. S., Dyrkheeva, N. S., Kuprushkin, M. S., Kolotaev, A. V., Khachatryan, D. S., Patel, J., Leung, I. K. H., Chand, R., Ayine-Tora, D. M., Reynisson, J., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 15 Oct 2019, In: Molecules. 24, 20, 3711.

    Research output: Contribution to journal › Article › peer-review

  71. Novel group of tyrosyl-DNA-phosphodiesterase 1 inhibitors based on disaccharide nucleosides as drug prototypes for anti-cancer therapy

    Komarova, A. O., Drenichev, M. S., Dyrkheeva, N. S., Kulikova, I. V., Oslovsky, V. E., Zakharova, O. D., Zakharenko, A. L., Mikhailov, S. N. & Lavrik, O. I., 7 Sept 2018, In: Journal of Enzyme Inhibition and Medicinal Chemistry. 33, 1, p. 1415-1429 15 p.

    Research output: Contribution to journal › Article › peer-review

  72. Novel inhibitors of DNA repair enzyme TDP1 combining monoterpenoid and adamantane fragments

    Mozhaitsev, E. S., Zakharenko, A. L., Suslov, E. V., Korchagina, D. V., Zakharova, O. D., Vasil’eva, I. A., Chepanova, A. A., Black, E., Patel, J., Chand, R., Reynisson, J., Leung, I. K. H., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2019, In: Anti-Cancer Agents in Medicinal Chemistry. 19, 4, p. 463-472 10 p.

    Research output: Contribution to journal › Article › peer-review

  73. Novel semisynthetic derivatives of bile acids as effective tyrosyl-DNA phosphodiesterase 1 inhibitors

    Salomatina, O. V., Popadyuk, I. I., Zakharenko, A. L., Zakharova, O. D., Fadeev, D. S., Komarova, N. I., Reynisson, J., Arabshahi, H. J., Chand, R., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 17 Mar 2018, In: Molecules. 23, 3, 19 p., 679.

    Research output: Contribution to journal › Article › peer-review

  74. Novel tyrosyl-DNA phosphodiesterase 1 inhibitors enhance the therapeutic impact of topoteсan on in vivo tumor models

    Zakharenko, A. L., Luzina, O. A., Sokolov, D. N., Kaledin, V. I., Nikolin, V. P., Popova, N. A., Patel, J., Zakharova, O. D., Chepanova, A. A., Zafar, A., Reynisson, J., Leung, E., Leung, I. K. H., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2019, In: European Journal of Medicinal Chemistry. 161, p. 581-593 13 p.

    Research output: Contribution to journal › Article › peer-review

  75. Optimization of nucleosome assembling from histones and model DNAs and estimation of the reconstitution efficiency

    Kutuzov, M. M., Kurgina, T. A., Belousova, E. A., Khodyreva, S. N. & Lavrik, O. I., 1 Feb 2019, In: Biopolymers and Cell. 35, 2, p. 91-98 8 p.

    Research output: Contribution to journal › Article › peer-review

  76. PARP-1 Activation Directs FUS to DNA Damage Sites to Form PARG-Reversible Compartments Enriched in Damaged DNA

    Singatulina, A. S., Hamon, L., Sukhanova, M. V., Desforges, B., Joshi, V., Bouhss, A., Lavrik, O. I. & Pastré, D., 7 May 2019, In: Cell Reports. 27, 6, p. 1809-1821.e5 18 p.

    Research output: Contribution to journal › Article › peer-review

  77. Poly(ADP-ribose) polymerases in regulation of DNA repair

    Lavrik, O., 1 Jan 2019, In: Biopolymers and Cell. 35, 3, p. 182-183 2 p.

    Research output: Contribution to journal › Article › peer-review

  78. Poly(ADP-ribosyl)ation and DNA repair synthesis in the extracts of naked mole rat, mouse, and human cells

    Kosova, A. A., Kutuzov, M. M., Evdokimov, A. N., Ilina, E. S., Belousova, E. A., Romanenko, S. A., Trifonov, V. A., Khodyreva, S. N. & Lavrik, O. I., 15 May 2019, In: Aging. 11, 9, p. 2852-2873 22 p.

    Research output: Contribution to journal › Article › peer-review

  79. Poly(ADP-ribosyl)ation by PARP1: reaction mechanism and regulatory proteins

    Alemasova, E. E. & Lavrik, O. I., 7 May 2019, In: Nucleic Acids Research. 47, 8, p. 3811-3827 17 p.

    Research output: Contribution to journal › Article › peer-review

  80. Pre-steady-state kinetic analysis of damage recognition by human single-strand selective monofunctional uracil-DNA glycosylase SMUG1

    Kuznetsova, A. A., Iakovlev, D. A., Misovets, I. V., Ishchenko, A. A., Saparbaev, M. K., Kuznetsov, N. A. & Fedorova, O. S., 21 Nov 2017, In: Molecular BioSystems. 13, 12, p. 2638-2649 12 p.

    Research output: Contribution to journal › Article › peer-review

  81. Pre-steady state kinetics of DNA binding and abasic site hydrolysis by tyrosyl-DNA phosphodiesterase 1

    Kuznetsov, N. A., Lebedeva, N. A., Kuznetsova, A. A., Rechkunova, N. I., Dyrkheeva, N. S., Kupryushkin, M. S., Stetsenko, D. A., Pyshnyi, D. V., Fedorova, O. S. & Lavrik, O. I., 18 Aug 2017, In: Journal of Biomolecular Structure and Dynamics. 35, 11, p. 2314-2327 14 p.

    Research output: Contribution to journal › Article › peer-review

  82. Processing of the abasic sites clustered with the benzo[a]pyrene adducts by the base excision repair enzymes

    Starostenko, L. V., Rechkunova, N. I., Lebedeva, N. A., Lomzov, A. A., Koval, V. V. & Lavrik, O. I., 1 Feb 2017, In: DNA Repair. 50, p. 43-53 11 p.

    Research output: Contribution to journal › Article › peer-review

  83. Production of abzymes in th, cba, and c57bl/6 mice before and after mog treatment: Comparing changes in cell differentiation and proliferation

    Aulova, K. S., Urusov, A. E., Toporkova, L. B., Sedykh, S. E., Shevchenko, Y. A., Tereshchenko, V. P., Sennikov, S. V., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., Jan 2020, In: Biomolecules. 10, 1, 24 p., 53.

    Research output: Contribution to journal › Article › peer-review

  84. Production, purification of the recombinant analog of y-box-binding protein 1 and its interaction with poly(ADP-ribose), RNA, single- and double-stranded DNAs

    Alemasova, E. E., Naumenko, K. N., Pestryakov, P. E. & Lavrik, O. I., 2017, In: Biopolymers and Cell. 33, 3, p. 214-220 7 p.

    Research output: Contribution to journal › Article › peer-review

  85. Promising new inhibitors of tyrosyl-DNA phosphodiesterase I (Tdp 1) combining 4- arylcoumarin and monoterpenoid moieties as components of complex antitumor therapy

    Khomenko, T. M., Zakharenko, A. L., Chepanova, A. A., Ilina, E. S., Zakharova, O. D., Kaledin, V. I., Nikolin, V. P., Popova, N. A., Korchagina, D. V., Reynisson, J., Chand, R., Ayine-tora, D. M., Patel, J., Leung, I. K. H., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2020, In: International Journal of Molecular Sciences. 21, 1, 21 p., 126.

    Research output: Contribution to journal › Article › peer-review

  86. p-Toluenesulfonic acid mediated one-pot cascade synthesis and cytotoxicity evaluation of polyfluorinated 2-aryl-2,3-dihydroquinolin-4-ones and their derivatives

    Politanskaya, L., Rybalova, T., Zakharova, O., Nevinsky, G. & Tretyakov, E., 1 Jul 2018, In: Journal of Fluorine Chemistry. 211, p. 129-140 12 p.

    Research output: Contribution to journal › Article › peer-review

  87. Purified horse milk exosomes contain an unpredictable small number of major proteins

    Sedykh, S. E., Purvinish, L. V., Monogarov, A. S., Burkova, E. E., Grigor'eva, A. E., Bulgakov, D. V., Dmitrenok, P. S., Vlassov, V. V., Ryabchikova, E. I. & Nevinsky, G. A., 1 Jun 2017, In: Biochimie Open. 4, p. 61-72 12 p.

    Research output: Contribution to journal › Article › peer-review

  88. Regulation of poly(ADP-Ribose) polymerase 1 activity by Y-Box-binding protein 1

    Naumenko, K. N., Sukhanova, M. V., Hamon, L., Kurgina, T. A., Alemasova, E. E., Kutuzov, M. M., Pastré, D. & Lavrik, O. I., 16 Sept 2020, In: Biomolecules. 10, 9, p. 1-26 26 p., 1325.

    Research output: Contribution to journal › Article › peer-review

  89. Replication protein A as a modulator of the poly(ADP-ribose)polymerase 1 activity

    Maltseva, E. A., Krasikova, Y. S., Sukhanova, M. V., Rechkunova, N. I. & Lavrik, O. I., 1 Dec 2018, In: DNA Repair. 72, p. 28-38 11 p.

    Research output: Contribution to journal › Article › peer-review

  90. Role of Arg243 and His239 Residues in the Recognition of Damaged Nucleotides by Human Uracil-DNA Glycosylase SMUG1

    Iakovlev, D. A., Alekseeva, I. V., Kuznetsov, N. A. & Fedorova, O. S., 1 May 2020, In: Biochemistry (Moscow). 85, 5, p. 594-603 10 p.

    Research output: Contribution to journal › Article › peer-review

  91. Role of Ionizing Amino Acid Residues in the Process of DNA Binding by Human AP Endonuclease 1 and in Its Catalysis

    Alekseeva, I. V., Bakman, A. S., Vorobjev, Y. N., Fedorova, O. S. & Kuznetsov, N. A., 14 Nov 2019, In: Journal of Physical Chemistry B. 123, 45, p. 9546-9556 11 p.

    Research output: Contribution to journal › Article › peer-review

  92. Roles of Active-Site Amino Acid Residues in Specific Recognition of DNA Lesions by Human 8-Oxoguanine-DNA Glycosylase (OGG1)

    Tyugashev, T. E., Vorobjev, Y. N., Kuznetsova, A. A., Lukina, M. V., Kuznetsov, N. A. & Fedorova, O. S., 13 Jun 2019, In: Journal of Physical Chemistry B. 123, 23, p. 4878-4887 10 p.

    Research output: Contribution to journal › Article › peer-review

  93. RPA and XPA interaction with DNA structures mimicking intermediates of the late stages in nucleotide excision repair

    Krasikova, Y. S., Rechkunova, N. I., Maltseva, E. A. & Lavrik, O. I., 10 Jan 2018, In: PLoS ONE. 13, 1, p. e0190782 20 p., 0190782.

    Research output: Contribution to journal › Article › peer-review

  94. Search for Modified DNA Sites with the Human Methyl-CpG-Binding Enzyme MBD4

    Yakovlev, D. A., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 2017, In: Acta Naturae. 9, 1, p. 26-37 12 p.

    Research output: Contribution to journal › Article › peer-review

  95. Structural basis for the recognition and processing of DNA containing bulky lesions by the mammalian nucleotide excision repair system

    Evdokimov, A. N., Tsidulko, A. Y., Popov, A. V., Vorobiev, Y. N., Lomzov, A. A., Koroleva, L. S., Silnikov, V. N., Petruseva, I. O. & Lavrik, O. I., 1 Jan 2018, In: DNA Repair. 61, p. 86-98 13 p.

    Research output: Contribution to journal › Article › peer-review

  96. Substrate specificity of healthy human sera IgG antibodies with peroxidase and oxydoreductase activities

    Tolmacheva, A. S., Ermakov, E. A., Buneva, V. N. & Nevinsky, G. A., 31 Jan 2018, In: Royal Society Open Science. 5, 1, p. 171097 13 p., 171097.

    Research output: Contribution to journal › Article › peer-review

  97. Substrate specificity of human apurinic/apyrimidinic endonuclease APE1 in the nucleotide incision repair pathway

    Kuznetsova, A. A., Matveeva, A. G., Milov, A. D., Vorobjev, Y. N., Dzuba, S. A., Fedorova, O. S. & Kuznetsov, N. A., 30 Nov 2018, In: Nucleic Acids Research. 46, 21, p. 11454-11465 12 p.

    Research output: Contribution to journal › Article › peer-review

  98. Substrate specificity of IgGs with peroxidase and oxidoreductase activities from sera of patients with systemic lupus erythematosus and multiple sclerosis

    Tolmacheva, A. S., Buneva, V. N. & Nevinsky, G. A., 1 Dec 2019, In: Journal of Molecular Recognition. 32, 12, p. e2807 15 p., 2807.

    Research output: Contribution to journal › Article › peer-review

  99. Synthesis and evaluation of aryliden- and hetarylidenfuranone derivatives of usnic acid as highly potent Tdp1 inhibitors

    Zakharova, O., Luzina, O., Zakharenko, A., Sokolov, D., Filimonov, A., Dyrkheeva, N., Chepanova, A., Ilina, E., Ilyina, A., Klabenkova, K., Chelobanov, B., Stetsenko, D., Zafar, A., Eurtivong, C., Reynisson, J., Volcho, K., Salakhutdinov, N. & Lavrik, O., 15 Aug 2018, In: Bioorganic and Medicinal Chemistry. 26, 15, p. 4470-4480 11 p.

    Research output: Contribution to journal › Article › peer-review

  100. Synthesis and Inhibitory Properties of Imines Containing Monoterpenoid and Adamantane Fragments Against DNA Repair Enzyme Tyrosyl-DNA Phosphodiesterase 1 (Tdp1)

    Zakharenko, A. L., Mozhaitsev, E. S., Suslov, E. V., Korchagina, D. V., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jul 2018, In: Chemistry of Natural Compounds. 54, 4, p. 672-676 5 p.

    Research output: Contribution to journal › Article › peer-review

  101. Synthesis of a series of NAD+ analogues, potential inhibitors of PARP 1, using ADP conjugates functionalized at the terminal phosphate group

    Sherstyuk, Y. V., Zakharenko, A. L., Kutuzov, M. M., Sukhanova, M. V., Lavrik, O. I., Silnikov, V. N. & Abramova, T. V., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 76-83 8 p.

    Research output: Contribution to journal › Article › peer-review

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