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  1. 2017

  2. At the interface of three nucleic acids: The role of RNA-binding proteins and poly(ADP-ribose) in DNA repair

    Alemasova, E. E. & Lavrik, O. I., 2017, In: Acta Naturae. 9, 2, p. 4-16 13 p.

    Research output: Contribution to journal › Review article › peer-review

  3. Genome Stability Maintenance in Naked aMole-Rat

    Petruseva, I. O., Evdokimov, A. N. & Lavrik, O. I., 2017, In: Acta Naturae. 9, 4, p. 31-41 11 p., 4.

    Research output: Contribution to journal › Article › peer-review

  4. Genome stability maintenance in naked mole-rat

    Petruseva, I. O., Evdokimov, A. N. & Lavrik, O. I., 2017, In: Acta Naturae. 9, 4, p. 31-41 11 p.

    Research output: Contribution to journal › Review article › peer-review

  5. Production, purification of the recombinant analog of y-box-binding protein 1 and its interaction with poly(ADP-ribose), RNA, single- and double-stranded DNAs

    Alemasova, E. E., Naumenko, K. N., Pestryakov, P. E. & Lavrik, O. I., 2017, In: Biopolymers and Cell. 33, 3, p. 214-220 7 p.

    Research output: Contribution to journal › Article › peer-review

  6. Search for Modified DNA Sites with the Human Methyl-CpG-Binding Enzyme MBD4

    Yakovlev, D. A., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 2017, In: Acta Naturae. 9, 1, p. 26-37 12 p.

    Research output: Contribution to journal › Article › peer-review

  7. Interaction features of adenine DNA glycosylase MutY from E. coli with DNA substrates

    Tyugashev, T. E., Kuznetsova, A. A., Kuznetsov, N. A. & Fedorova, O. S., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 13-22 10 p.

    Research output: Contribution to journal › Article › peer-review

  8. Synthesis of a series of NAD+ analogues, potential inhibitors of PARP 1, using ADP conjugates functionalized at the terminal phosphate group

    Sherstyuk, Y. V., Zakharenko, A. L., Kutuzov, M. M., Sukhanova, M. V., Lavrik, O. I., Silnikov, V. N. & Abramova, T. V., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 76-83 8 p.

    Research output: Contribution to journal › Article › peer-review

  9. The kinetic analysis of recognition of the damaged nucleotides by mutant forms of the 8-oxoguanine DNA glycosylase hOGG1

    Lukina, M. V., Kuznetsova, A. A., Kuznetsov, N. A. & Fedorova, O. S., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 1-12 12 p.

    Research output: Contribution to journal › Article › peer-review

  10. Usnic acid derivatives are effective inhibitors of tyrosyl-DNA phosphodiesterase 1

    Zakharenko, A. L., Luzina, O. A., Sokolov, D. N., Zakharova, O. D., Rakhmanova, M. E., Chepanova, A. A., Dyrkheeva, N. S., Lavrik, O. I. & Salakhutdinov, N. F., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 84-90 7 p.

    Research output: Contribution to journal › Article › peer-review

  11. A versatile strategy for the design and synthesis of novel ADP conjugates and their evaluation as potential poly(ADP-ribose) polymerase 1 inhibitors

    Sherstyuk, Y. V., Zakharenko, A. L., Kutuzov, M. M., Chalova, P. V., Sukhanova, M. V., Lavrik, O. I., Silnikov, V. N. & Abramova, T. V., 1 Feb 2017, In: Molecular Diversity. 21, 1, p. 101-113 13 p.

    Research output: Contribution to journal › Article › peer-review

  12. Processing of the abasic sites clustered with the benzo[a]pyrene adducts by the base excision repair enzymes

    Starostenko, L. V., Rechkunova, N. I., Lebedeva, N. A., Lomzov, A. A., Koval, V. V. & Lavrik, O. I., 1 Feb 2017, In: DNA Repair. 50, p. 43-53 11 p.

    Research output: Contribution to journal › Article › peer-review

  13. The formation of catalytically competent enzyme–substrate complex is not a bottleneck in lesion excision by human alkyladenine DNA glycosylase

    Kuznetsov, N. A., Kiryutin, A. S., Kuznetsova, A. A., Panov, M. S., Barsukova, M. O., Yurkovskaya, A. V. & Fedorova, O. S., 4 Apr 2017, In: Journal of Biomolecular Structure and Dynamics. 35, 5, p. 950-967 18 p.

    Research output: Contribution to journal › Article › peer-review

  14. Inhibitors of nuclease and redox activity of apurinic/apyrimidinic endonuclease 1/redox effector factor 1 (APE1/Ref-1)

    Laev, S. S., Salakhutdinov, N. F. & Lavrik, O. I., 1 May 2017, In: Bioorganic and Medicinal Chemistry. 25, 9, p. 2531-2544 14 p.

    Research output: Contribution to journal › Review article › peer-review

  15. Molecular dynamics simulation of the opposite-base preference and interactions in the active site of formamidopyrimidine-DNA glycosylase

    Popov, A. V., Endutkin, A. V., Vorobjev, Y. N. & Zharkov, D. O., 8 May 2017, In: BMC Structural Biology. 17, 1, p. 1-19 19 p., 5.

    Research output: Contribution to journal › Article › peer-review

  16. Mutational and kinetic analysis of lesion recognition by Escherichia coli endonuclease VIII

    Kladova, O. A., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 13 May 2017, In: Genes. 8, 5, 13 p., 140.

    Research output: Contribution to journal › Article › peer-review

  17. Purified horse milk exosomes contain an unpredictable small number of major proteins

    Sedykh, S. E., Purvinish, L. V., Monogarov, A. S., Burkova, E. E., Grigor'eva, A. E., Bulgakov, D. V., Dmitrenok, P. S., Vlassov, V. V., Ryabchikova, E. I. & Nevinsky, G. A., 1 Jun 2017, In: Biochimie Open. 4, p. 61-72 12 p.

    Research output: Contribution to journal › Article › peer-review

  18. Role of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) in DNA repair

    Kosova, A. A., Khodyreva, S. N. & Lavrik, O. I., 1 Jun 2017, In: Biochemistry (Moscow). 82, 6, p. 643-654 12 p.

    Research output: Contribution to journal › Review article › peer-review

  19. The genome-wide transcription response to telomerase deficiency in the thermotolerant yeast Hansenula polymorpha DL-1

    Beletsky, A. V., Malyavko, A. N., Sukhanova, M. V., Mardanova, E. S., Zvereva, M. I., Petrova, O. A., Parfenova, Y. Y., Rubtsova, M. P., Mardanov, A. V., Lavrik, O. I., Dontsova, O. A. & Ravin, N. V., 28 Jun 2017, In: BMC Genomics. 18, 1, p. 492 12 p., 492.

    Research output: Contribution to journal › Article › peer-review

  20. Neural response to catecholamine depletion in remitted bulimia nervosa: Relation to depression and relapse

    Ermakov, E., Smirnova, L., Ivanova, S., Zaharova, O., Buneva, V. & Nevinsky, G., 1 Jul 2017, In: European Neuropsychopharmacology. 27, 7, p. 633-646 14 p.

    Research output: Contribution to journal › Article › peer-review

  21. Pre-steady state kinetics of DNA binding and abasic site hydrolysis by tyrosyl-DNA phosphodiesterase 1

    Kuznetsov, N. A., Lebedeva, N. A., Kuznetsova, A. A., Rechkunova, N. I., Dyrkheeva, N. S., Kupryushkin, M. S., Stetsenko, D. A., Pyshnyi, D. V., Fedorova, O. S. & Lavrik, O. I., 18 Aug 2017, In: Journal of Biomolecular Structure and Dynamics. 35, 11, p. 2314-2327 14 p.

    Research output: Contribution to journal › Article › peer-review

  22. Conformational dynamics of human dioxygenase ABH2 in the course of action on methylated DNA

    Iakovlev, D. A., Timofeyeva, N. A., Kuznetsov, N. A. & Fedorova, O. S., Sept 2017, In: FEBS Journal. 284, p. 109-110 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  23. Effect of downstream enzymes of base excision DNA repair pathway on the action of human DNA glycosylase MBD4

    Kladova, O., Iakovlev, D., Kuznetsov, N. & Fedorova, O., Sept 2017, In: FEBS Journal. 284, p. 112-112 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  24. YB-1: a PARamount regulator

    Alemasova, E., Naumenko, K. & Lavrik, O., Sept 2017, In: FEBS Journal. 284, p. 73-73 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  25. Catalase activity of IgG antibodies from the sera of healthy donors and patients with schizophrenia

    Ermakov, E. A., Smirnova, L. P., Bokhan, N. A., Semke, A. V., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 Sept 2017, In: PLoS ONE. 12, 9, p. e0183867 25 p., e0183867.

    Research output: Contribution to journal › Article › peer-review

  26. Global DNA dynamics of 8-oxoguanine repair by human OGG1 revealed by stopped-flow kinetics and molecular dynamics simulation

    Lukina, M. V., Koval, V. V., Lomzov, A. A., Zharkov, D. O. & Fedorova, O. S., 1 Oct 2017, In: Molecular BioSystems. 13, 10, p. 1954-1966 13 p.

    Research output: Contribution to journal › Article › peer-review

  27. How human IgGs against myelin basic protein (MBP) recognize oligopeptides and MBP

    Belov, S., Buneva, V. N. & Nevinsky, G. A., 1 Oct 2017, In: Journal of Molecular Recognition. 30, 10, 12 p., 2637.

    Research output: Contribution to journal › Article › peer-review

  28. Evolution of inhibitor-resistant natural mutant forms of HIV-1 protease probed by pre-steady state kinetic analysis

    Zakharova, M. Y., Kuznetsova, A. A., Kaliberda, E. N., Dronina, M. A., Kolesnikov, A. V., Kozyr, A. V., Smirnov, I. V., Rumsh, L. D., Fedorova, O. S., Knorre, D. G., Gabibov, A. G. & Kuznetsov, N. A., 1 Nov 2017, In: Biochimie. 142, p. 125-134 10 p.

    Research output: Contribution to journal › Article › peer-review

  29. Pre-steady-state kinetic analysis of damage recognition by human single-strand selective monofunctional uracil-DNA glycosylase SMUG1

    Kuznetsova, A. A., Iakovlev, D. A., Misovets, I. V., Ishchenko, A. A., Saparbaev, M. K., Kuznetsov, N. A. & Fedorova, O. S., 21 Nov 2017, In: Molecular BioSystems. 13, 12, p. 2638-2649 12 p.

    Research output: Contribution to journal › Article › peer-review

  30. A distinct serum protein pattern in patients with paranoid schizophrenia

    Alekseeva, I. V., Timofeyeva, N. A., Ivanova, S. A., Simutkin, G. G., Semke, A. V., Losenkov, I. S., Bokhan, N. A., Fedorova, O. S. & Chernonosov, A. A., 1 Dec 2017, In: Physiology and Pharmacology (Iran). 21, 4, p. 304-311 8 p.

    Research output: Contribution to journal › Article › peer-review

  31. Changes in haematopoietic progenitor colony differentiation and proliferation and the production of different abzymes in EAE mice treated with DNA

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sennikov, S. V., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2017, In: Journal of Cellular and Molecular Medicine. 21, 12, p. 3795-3809 15 p.

    Research output: Contribution to journal › Article › peer-review

  32. Y-box-binding protein 1 stimulates abasic site cleavage

    Alemasova, E. E., Naumenko, K. N., Moor, N. A. & Lavrik, O. I., 1 Dec 2017, In: Biochemistry (Moscow). 82, 12, p. 1521-1528 8 p.

    Research output: Contribution to journal › Article › peer-review

  33. 2018

  34. DNA Repair Enzymes as Promising Targets in Oncotherapy

    Zakharenko, A. L., Lebedeva, N. A. & Lavrik, O. I., 1 Jan 2018, In: Russian Journal of Bioorganic Chemistry. 44, 1, p. 1-18 18 p.

    Research output: Contribution to journal › Review article › peer-review

  35. Structural basis for the recognition and processing of DNA containing bulky lesions by the mammalian nucleotide excision repair system

    Evdokimov, A. N., Tsidulko, A. Y., Popov, A. V., Vorobiev, Y. N., Lomzov, A. A., Koroleva, L. S., Silnikov, V. N., Petruseva, I. O. & Lavrik, O. I., 1 Jan 2018, In: DNA Repair. 61, p. 86-98 13 p.

    Research output: Contribution to journal › Article › peer-review

  36. RPA and XPA interaction with DNA structures mimicking intermediates of the late stages in nucleotide excision repair

    Krasikova, Y. S., Rechkunova, N. I., Maltseva, E. A. & Lavrik, O. I., 10 Jan 2018, In: PLoS ONE. 13, 1, p. e0190782 20 p., 0190782.

    Research output: Contribution to journal › Article › peer-review

  37. Bispecific antibodies: Design, therapy, perspectives

    Sedykh, S. E., Prinz, V. V., Buneva, V. N. & Nevinsky, G. A., 22 Jan 2018, In: Drug Design, Development and Therapy. 12, p. 195-208 14 p.

    Research output: Contribution to journal › Review article › peer-review

  38. Substrate specificity of healthy human sera IgG antibodies with peroxidase and oxydoreductase activities

    Tolmacheva, A. S., Ermakov, E. A., Buneva, V. N. & Nevinsky, G. A., 31 Jan 2018, In: Royal Society Open Science. 5, 1, p. 171097 13 p., 171097.

    Research output: Contribution to journal › Article › peer-review

  39. Biotin-decorated anti-cancer nucleotide theranostic conjugate of human serum albumin: Where the seed meets the soil?

    Popova, T. V., Khan, H., Chubarov, A. S., Lisitskiy, V. A., Antonova, N. M., Akulov, A. E., Shevelev, O. B., Zavjalov, E. L., Silnikov, V. N., Ahmad, S. & Godovikova, T. S., 1 Feb 2018, In: Bioorganic and Medicinal Chemistry Letters. 28, 3, p. 260-264 5 p.

    Research output: Contribution to journal › Article › peer-review

  40. Coupled molecular dynamics and continuum electrostatic method to compute the ionization pKa’s of proteins as a function of pH. Test on a large set of proteins

    Vorobjev, Y. N., Scheraga, H. A. & Vila, J. A., 17 Feb 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 3, p. 561-574 14 p.

    Research output: Contribution to journal › Article › peer-review

  41. DNA Bearing Bulky Fluorescent and Photoreactive Damage in Both Strands as Substrates of the Nucleotide Excision Repair System

    Lukyanchikova, N. V., Petruseva, I. O., Evdokimov, A. N., Koroleva, L. S. & Lavrik, O. I., 1 Mar 2018, In: Molecular Biology. 52, 2, p. 237-246 10 p.

    Research output: Contribution to journal › Article › peer-review

  42. DNA is a New Target of Parp3

    Belousova, E. A., Ishchenko, A. A. & Lavrik, O. I., 8 Mar 2018, In: Scientific Reports. 8, 1, p. 4176 12 p., 4176.

    Research output: Contribution to journal › Article › peer-review

  43. A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity

    Kurgina, T. A., Anarbaev, R. O., Sukhanova, M. V. & Lavrik, O. I., 15 Mar 2018, In: Analytical Biochemistry. 545, p. 91-97 7 p.

    Research output: Contribution to journal › Article › peer-review

  44. Characterization of DNA ADP-ribosyltransferase activities of PARP2 and PARP3: New insights into DNA ADP-ribosylation

    Zarkovic, G., Belousova, E. A., Talhaoui, I., Saint-Pierre, C., Kutuzov, M. M., Matkarimov, B. T., Biard, D., Gasparutto, D., Lavrik, O. I. & Ishchenko, A. A., 16 Mar 2018, In: Nucleic Acids Research. 46, 5, p. 2417-2431 15 p.

    Research output: Contribution to journal › Article › peer-review

  45. Novel semisynthetic derivatives of bile acids as effective tyrosyl-DNA phosphodiesterase 1 inhibitors

    Salomatina, O. V., Popadyuk, I. I., Zakharenko, A. L., Zakharova, O. D., Fadeev, D. S., Komarova, N. I., Reynisson, J., Arabshahi, H. J., Chand, R., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 17 Mar 2018, In: Molecules. 23, 3, 19 p., 679.

    Research output: Contribution to journal › Article › peer-review

  46. Kinetics and thermodynamics of DNA processing by wild type DNA-glycosylase endo III and its catalytically inactive mutant forms

    Kladova, O. A., Krasnoperov, L. N., Kuznetsov, N. A. & Fedorova, O. S., 30 Mar 2018, In: Genes. 9, 4, 18 p., 190.

    Research output: Contribution to journal › Article › peer-review

  47. Protein–Protein Interactions in DNA Base Excision Repair

    Moor, N. A. & Lavrik, O. I., 1 Apr 2018, In: Biochemistry (Moscow). 83, 4, p. 411-422 12 p.

    Research output: Contribution to journal › Review article › peer-review

  48. Comprehensive analysis of telomerase inhibition by gallotannin

    Savelyev, N., Baykuzina, P., Dokudovskaya, S., Lavrik, O., Rubtsova, M. & Dontsova, O., 10 Apr 2018, In: Oncotarget. 9, 27, p. 18712-18719 8 p.

    Research output: Contribution to journal › Article › peer-review

  49. DNA Bearing Bulky Fluorescent and Photoreactive Damage in Both Strands as Substrates of the Nucleotide Excision Repair System

    Lukyanchikova, N. V., Petruseva, I. O., Evdokimov, A. N., Koroleva, L. S. & Lavrik, O. I., 27 Apr 2018, In: Molekuliarnaia biologiia. 52, 2, p. 277-288 12 p.

    Research output: Contribution to journal › Article › peer-review

  50. Blood-Derived RNA- and microRNA-Hydrolyzing IgG Antibodies in Schizophrenia Patients

    Ermakov, E. A., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 May 2018, In: Biochemistry (Moscow). 83, 5, p. 507-526 20 p.

    Research output: Contribution to journal › Article › peer-review

  51. The multifunctional protein YB-1 potentiates PARP1 activity and decreases the efficiency of PARP1 inhibitors

    Alemasova, E. E., Naumenko, K. N., Kurgina, T. A., Anarbaev, R. O. & Lavrik, O. I., 1 May 2018, In: Oncotarget. 9, 34, p. 23349-23365 17 p.

    Research output: Contribution to journal › Article › peer-review

  52. Effect of pH on DNA binding and catalysis of human apurinic/apyrimidinic endonuclease 1

    Alekseeva, I., Bakman, A., Vorobjev, Y., Fedorova, O. & Kuznetsov, N., Jul 2018, In: FEBS Open Bio. 8, p. 405-405 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

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