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First report on B chromosome content in a reptilian species : the case of Anolis carolinensis. / Kichigin, Ilya G.; Lisachov, Artem P.; Giovannotti, Massimo и др.

в: Molecular Genetics and Genomics, Том 294, № 1, 11.02.2019, стр. 13-21.

Результаты исследований: Научные публикации в периодических изданияхстатьяРецензирование

Harvard

Kichigin, IG, Lisachov, AP, Giovannotti, M, Makunin, AI, Kabilov, MR, O’Brien, PCM, Ferguson-Smith, MA, Graphodatsky, AS & Trifonov, VA 2019, 'First report on B chromosome content in a reptilian species: the case of Anolis carolinensis', Molecular Genetics and Genomics, Том. 294, № 1, стр. 13-21. https://doi.org/10.1007/s00438-018-1483-9

APA

Kichigin, I. G., Lisachov, A. P., Giovannotti, M., Makunin, A. I., Kabilov, M. R., O’Brien, P. C. M., Ferguson-Smith, M. A., Graphodatsky, A. S., & Trifonov, V. A. (2019). First report on B chromosome content in a reptilian species: the case of Anolis carolinensis. Molecular Genetics and Genomics, 294(1), 13-21. https://doi.org/10.1007/s00438-018-1483-9

Vancouver

Kichigin IG, Lisachov AP, Giovannotti M, Makunin AI, Kabilov MR, O’Brien PCM и др. First report on B chromosome content in a reptilian species: the case of Anolis carolinensis. Molecular Genetics and Genomics. 2019 февр. 11;294(1):13-21. doi: 10.1007/s00438-018-1483-9

Author

Kichigin, Ilya G. ; Lisachov, Artem P. ; Giovannotti, Massimo и др. / First report on B chromosome content in a reptilian species : the case of Anolis carolinensis. в: Molecular Genetics and Genomics. 2019 ; Том 294, № 1. стр. 13-21.

BibTeX

@article{cfe3319d9d1745bb83390246aaeffe8b,
title = "First report on B chromosome content in a reptilian species: the case of Anolis carolinensis",
abstract = "Supernumerary elements of the genome are often called B chromosomes. They usually consist of various autosomal sequences and, because of low selective pressure, are mostly pseudogenized and contain many repeats. There are numerous reports on B chromosomes in mammals, fish, invertebrates, plants, and fungi, but only a few of them have been studied using sequencing techniques. However, reptilian supernumerary chromosomes have been detected only cytogenetically and never sequenced or analyzed at the molecular level. One model squamate species with available genome sequence is Anolis carolinensis. The scope of the present article is to describe the genetic content of A. carolinensis supernumerary chromosomes. In this article, we confirm the presence of B chromosomes in this species by reverse painting and synaptonemal complex analysis. We applied low-pass high-throughput sequencing to analyze flow-sorted B chromosomes. Anole B chromosomes exhibit similar traits to other supernumerary chromosomes from different taxons: they contain two genes related to cell division control (INCENP and SPIRE2), are enriched in specific repeats, and show a high degree of pseudogenization. Therefore, the present study confirms that reptilian B chromosomes resemble supernumerary chromosomes of other taxons.",
keywords = "Carolina anole, DOP-PCR, High-throughput sequencing, Squamata, Supernumerary chromosomes, LIZARD, SEX-CHROMOSOMES, RED FOX, GENOME, ORIGIN, EVOLUTION, SQUAMATA, DNA, NYCTEREUTES-PROCYONOIDES, DOG",
author = "Kichigin, {Ilya G.} and Lisachov, {Artem P.} and Massimo Giovannotti and Makunin, {Alex I.} and Kabilov, {Marsel R.} and O{\textquoteright}Brien, {Patricia C.M.} and Ferguson-Smith, {Malcolm A.} and Graphodatsky, {Alexander S.} and Trifonov, {Vladimir A.}",
year = "2019",
month = feb,
day = "11",
doi = "10.1007/s00438-018-1483-9",
language = "English",
volume = "294",
pages = "13--21",
journal = "Molecular Genetics and Genomics",
issn = "1617-4615",
publisher = "Springer-Verlag GmbH and Co. KG",
number = "1",

}

RIS

TY - JOUR

T1 - First report on B chromosome content in a reptilian species

T2 - the case of Anolis carolinensis

AU - Kichigin, Ilya G.

AU - Lisachov, Artem P.

AU - Giovannotti, Massimo

AU - Makunin, Alex I.

AU - Kabilov, Marsel R.

AU - O’Brien, Patricia C.M.

AU - Ferguson-Smith, Malcolm A.

AU - Graphodatsky, Alexander S.

AU - Trifonov, Vladimir A.

PY - 2019/2/11

Y1 - 2019/2/11

N2 - Supernumerary elements of the genome are often called B chromosomes. They usually consist of various autosomal sequences and, because of low selective pressure, are mostly pseudogenized and contain many repeats. There are numerous reports on B chromosomes in mammals, fish, invertebrates, plants, and fungi, but only a few of them have been studied using sequencing techniques. However, reptilian supernumerary chromosomes have been detected only cytogenetically and never sequenced or analyzed at the molecular level. One model squamate species with available genome sequence is Anolis carolinensis. The scope of the present article is to describe the genetic content of A. carolinensis supernumerary chromosomes. In this article, we confirm the presence of B chromosomes in this species by reverse painting and synaptonemal complex analysis. We applied low-pass high-throughput sequencing to analyze flow-sorted B chromosomes. Anole B chromosomes exhibit similar traits to other supernumerary chromosomes from different taxons: they contain two genes related to cell division control (INCENP and SPIRE2), are enriched in specific repeats, and show a high degree of pseudogenization. Therefore, the present study confirms that reptilian B chromosomes resemble supernumerary chromosomes of other taxons.

AB - Supernumerary elements of the genome are often called B chromosomes. They usually consist of various autosomal sequences and, because of low selective pressure, are mostly pseudogenized and contain many repeats. There are numerous reports on B chromosomes in mammals, fish, invertebrates, plants, and fungi, but only a few of them have been studied using sequencing techniques. However, reptilian supernumerary chromosomes have been detected only cytogenetically and never sequenced or analyzed at the molecular level. One model squamate species with available genome sequence is Anolis carolinensis. The scope of the present article is to describe the genetic content of A. carolinensis supernumerary chromosomes. In this article, we confirm the presence of B chromosomes in this species by reverse painting and synaptonemal complex analysis. We applied low-pass high-throughput sequencing to analyze flow-sorted B chromosomes. Anole B chromosomes exhibit similar traits to other supernumerary chromosomes from different taxons: they contain two genes related to cell division control (INCENP and SPIRE2), are enriched in specific repeats, and show a high degree of pseudogenization. Therefore, the present study confirms that reptilian B chromosomes resemble supernumerary chromosomes of other taxons.

KW - Carolina anole

KW - DOP-PCR

KW - High-throughput sequencing

KW - Squamata

KW - Supernumerary chromosomes

KW - LIZARD

KW - SEX-CHROMOSOMES

KW - RED FOX

KW - GENOME

KW - ORIGIN

KW - EVOLUTION

KW - SQUAMATA

KW - DNA

KW - NYCTEREUTES-PROCYONOIDES

KW - DOG

UR - http://www.scopus.com/inward/record.url?scp=85052304735&partnerID=8YFLogxK

U2 - 10.1007/s00438-018-1483-9

DO - 10.1007/s00438-018-1483-9

M3 - Article

C2 - 30146671

AN - SCOPUS:85052304735

VL - 294

SP - 13

EP - 21

JO - Molecular Genetics and Genomics

JF - Molecular Genetics and Genomics

SN - 1617-4615

IS - 1

ER -

ID: 16239374