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  1. 2025

  2. Thermodynamic parameters obtained for the formation of the Cas12a-RNA/DNA complex

    Baranova, S. V., Zhdanova, P. V., Golyshev, V. M., Lomzov, A. A., Pestryakov, P. E., Chernonosov, A. A. & Koval, V. V., Jan 2025, In: Biochemical and Biophysical Research Communications. 743, p. 151176 151176.

    Research output: Contribution to journal › Article › peer-review

  3. 2024

  4. Cleavage of DNA Substrate Containing Nucleotide Mismatch in the Complementary Region to sgRNA by Cas9 Endonuclease: Thermodynamic and Structural Features

    Baranova, S. V., Zhdanova, P. V., Koveshnikova, A. D., Pestryakov, P. E., Vokhtantsev, I. P., Chernonosov, A. A. & Koval, V. V., Oct 2024, In: International Journal of Molecular Sciences. 25, 19, 10862.

    Research output: Contribution to journal › Article › peer-review

  5. Redox Transformations of the OX063 Radical in Biological Media: Oxidative Decay of Initial Trityl with Further Formation of Structurally‐Modified TAM

    Ovcherenko, S. S., Raizvich, A. E., Rogozhnikova, O. Y., Tormyshev, V. M., Trukhin, D. V., Koval, V. V., Salnikov, G. E., Genaev, A. M., Shernyukov, A. V. & Bagryanskaya, E. G., 16 Sept 2024, In: Chemistry - A European Journal. 30, 52, 8 p., e202400718.

    Research output: Contribution to journal › Article › peer-review

  6. Structural and Dynamic Features of the Recognition of 8-oxoguanosine Paired with an 8-oxoG-clamp by Human 8-oxoguanine-DNA Glycosylase

    Lukina, M. V., Zhdanova, P. V. & Koval, V. V., May 2024, In: Current issues in molecular biology. 46, 5, p. 4119-4132 14 p.

    Research output: Contribution to journal › Article › peer-review

  7. Gene networks and metabolomic screening analysis revealed specific pathways of amino acid and acylcarnitine profile alterations in blood plasma of patients with Parkinson’s disease and vascular parkinsonism

    Makarova, A. A., Melnikova, P. M., Rogachev, A. D., Demenkov, P. S., Ivanisenko, T. V., Predtechenskaya, E. V., Karmanov, S. Y., Koval, V. V., Pokrovsky, A. G., Lavrik, I. N., Kolchanov, N. A. & Ivanisenko, V. A., 2024, In: Вавиловский журнал генетики и селекции. 28, 8, p. 927-939 13 p.

    Research output: Contribution to journal › Article › peer-review

  8. Сборник задач и упражнений по молекулярной биологии

    Грин, И. Р., Воробьев, П. Е., Вохтанцев, И. П., Коваль, В. В., Коваль, О. А. & Жарков, Д. О., 2024, 72 p.

    Research output: Book/Report › Teaching manual

  9. 2023

  10. A New Human Uveal Melanoma Cell Line: Melanin Production and Molecular Markers for Targeted Therapy

    Zhilnikova, M. V., Novak, D. D., Troitskaya, O. S., Nushtaeva, A. A., Biryukov, M. M., Zvereva, S. P., Varlamov, M. E., Koval, V. V., Stanishevskaya, O. M., Chernikh, D. V., Kononova, N. V., Atamanov, V. V. & Koval, O. A., Dec 2023, In: Biochemistry (Moscow) Supplement Series B: Biomedical Chemistry. 17, 4, p. 165-171 7 p.

    Research output: Contribution to journal › Article › peer-review

  11. Structure of an Ice-Binding Protein from Myoxocephalus octodecemspinosus Determined by Molecular Dynamics and Based on Circular Dichroism Spectra

    Oleinik, G. A., Zhdanova, P., Koval, V. V., Chernonosov, A. A. & Baranova, S. V., Aug 2023, In: Biophysics (Russian Federation). 68, 4, p. 513-518 6 p., 2.

    Research output: Contribution to journal › Article › peer-review

  12. Dataset for Spectroscopic, Structural and Dynamic Analysis of Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3

    Kanazhevskaya, L. Y., Gorbunov, A. A., Zhdanova, P. V. & Koval, V. V., Mar 2023, In: Data. 8, 3, 57.

    Research output: Contribution to journal › Article › peer-review

  13. 2022

  14. Structure- and Content-Dependent Efficiency of Cas9-Assisted DNA Cleavage in Genome-Editing Systems

    Baranova, S. V., Zhdanova, P. V., Lomzov, A. A., Koval, V. V. & Chernonosov, A. A., Nov 2022, In: International Journal of Molecular Sciences. 23, 22, 13889.

    Research output: Contribution to journal › Article › peer-review

  15. Thermodynamic Swings: How Ideal Complex of Cas9-RNA/DNA Forms

    Zhdanova, P. V., Lomzov, A. A., Prokhorova, D. V., Stepanov, G. A., Chernonosov, A. A. & Koval, V. V., 10 Aug 2022, In: International Journal of Molecular Sciences. 23, 16, 8891.

    Research output: Contribution to journal › Article › peer-review

  16. Structural features of DNA polymerases β and λ in complex with benzo[a]pyrene-adducted DNA cause a difference in lesion tolerance

    Rechkunova, N. I., Zhdanova, P. V., Lebedeva, N. A., Maltseva, E. A., Koval, V. V. & Lavrik, O. I., Aug 2022, In: DNA Repair. 116, 103353.

    Research output: Contribution to journal › Article › peer-review

  17. Application of Parallel Reaction Monitoring to the Development and Validation of a Quantitative Assay for ST-246 in Human Plasma

    Chernonosov, A. A., Oleinik, G. A. & Koval, V. V., 21 Jul 2022, In: International Journal of Molecular Sciences. 23, 14, 8021.

    Research output: Contribution to journal › Article › peer-review

  18. Parallel Reaction Monitoring Mode for Atenolol Quantification in Dried Plasma Spots by Liquid Chromatography Coupled with High-Resolution Mass Spectrometry

    Aksenova, L. V., Koval, V. V. & Chernonosov, A. A., Jul 2022, In: Processes. 10, 7, 1240.

    Research output: Contribution to journal › Article › peer-review

  19. Development and Validation of a Method of Liquid Chromatography Coupled with Tandem Mass Spectrometry for Quantification of ST-246 (Tecovirimat) in Human Plasma

    Oleinik, G. A., Koval, V. V., Usova, S. V., Shishkina, L. N. & Chernonosov, A. A., 1 Jun 2022, In: Molecules. 27, 11, 3577.

    Research output: Contribution to journal › Article › peer-review

  20. Probing the Dynamics of Streptococcus pyogenes Cas9 Endonuclease Bound to the sgRNA Complex Using Hydrogen‐Deuterium Exchange Mass Spectrometry

    Zhdanova, P. V., Chernonosov, A. A., Prokhorova, D. V., Stepanov, G. A., Kanazhevskaya, L. Y. & Koval, V. V., 1 Feb 2022, In: International Journal of Molecular Sciences. 23, 3, 1129.

    Research output: Contribution to journal › Article › peer-review

  21. Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., Feb 2022, In: Data in Brief. 40, 107760.

    Research output: Contribution to journal › Article › peer-review

  22. Dynamics and Conformational Changes in Human NEIL2 DNA Glycosylase Analyzed by Hydrogen/Deuterium Exchange Mass Spectrometry

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., 30 Jan 2022, In: Journal of Molecular Biology. 434, 2, 167334.

    Research output: Contribution to journal › Article › peer-review

  23. 2021

  24. The development of a liquid chromatography high‐resolution mass spectrometric method for apixaban quantification in dried plasma spots in parallel reaction monitoring mode

    Chernonosov, A., Aksenova, L. & Koval, V., Mar 2021, In: Processes. 9, 3, p. 1-12 12 p., 450.

    Research output: Contribution to journal › Article › peer-review

  25. 2020

  26. Changes in Amino Acid and Acylcarnitine Plasma Profiles for Distinguishing Patients with Multiple Sclerosis from Healthy Controls

    Kasakin, M. F., Rogachev, A. D., Zaigraev, V. J., Koval, V. V. & Pokrovsky, A. G., 15 Jul 2020, In: Multiple sclerosis international. 2020, 10 p., 9010937.

    Research output: Contribution to journal › Article › peer-review

  27. 2019

  28. DNA complexes with human apurinic/apyrimidinic endonuclease 1: structural insights revealed by pulsed dipolar EPR with orthogonal spin labeling

    Krumkacheva, O. A., Shevelev, G. Y., Lomzov, A. A., Dyrkheeva, N. S., Kuzhelev, A. A., Koval, V. V., Tormyshev, V. M., Polienko, Y. F., Fedin, M. V., Pyshnyi, D. V., Lavrik, O. I. & Bagryanskaya, E. G., 5 Sept 2019, In: Nucleic Acids Research. 47, 15, p. 7767-7780 14 p.

    Research output: Contribution to journal › Article › peer-review

  29. Assessment of the phenylketonuria (PKU)-associated mutation p.R155H biochemical manifestations by mass spectrometry-based blood metabolite profiling

    Baturina, O. A., Chernonosov, A. A., Koval, V. V. & Morozov, I. V., 16 Aug 2019, In: Acta Naturae. 11, 2, p. 42-46 5 p.

    Research output: Contribution to journal › Article › peer-review

  30. New Spin Probes: Tri- and Hexacationic Derivatives of Stable Tetrathiatriarylmethyl Radicals

    Trukhin, D. V., Rogozhnikova, O. Y., Troitskaya, T. I., Kuzhelev, A. A., Amosov, E. V., Halpern, H. J., Koval’, V. V. & Tormyshev, V. M., 1 Mar 2019, In: Russian Journal of Organic Chemistry. 55, 3, p. 296-301 6 p.

    Research output: Contribution to journal › Article › peer-review

  31. 2018

  32. Nucleotide modifications decrease innate immune response induced by synthetic analogs of snRNAs and snoRNAs

    Stepanov, G., Zhuravlev, E., Shender, V., Nushtaeva, A., Balakhonova, E., Mozhaeva, E., Kasakin, M., Koval, V., Lomzov, A., Pavlyukov, M., Malyants, I., Zhorov, M., Kabilova, T., Chernolovskaya, E., Govorun, V., Kuligina, E., Semenov, D. & Richter, V., 2 Nov 2018, In: Genes. 9, 11, 18 p., 531.

    Research output: Contribution to journal › Article › peer-review

  33. Data on PAGE analysis and MD simulation for the interaction of endonuclease Apn1 from Saccharomyces cerevisiae with DNA substrates containing 5,6-dihydrouracyl and 2-aminopurine

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Oct 2018, In: Data in Brief. 20, p. 1515-1524 10 p.

    Research output: Contribution to journal › Article › peer-review

  34. Apurinic/apyrimidinic endonuclease Apn1 from Saccharomyces cerevisiae is recruited to the nucleotide incision repair pathway: Kinetic and structural features

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Sept 2018, In: Biochimie. 152, p. 53-62 10 p.

    Research output: Contribution to journal › Article › peer-review

  35. Quantitation of drugs using for treatment of essential hypertension in dried blood spots by LC-MS/MS and correlation with dried serum spots

    Chernonosov, A., Kasakin, M. & Koval, V., Jul 2018, In: FEBS Open Bio. 8, p. 467-468 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  36. 2017

  37. Global DNA dynamics of 8-oxoguanine repair by human OGG1 revealed by stopped-flow kinetics and molecular dynamics simulation

    Lukina, M. V., Koval, V. V., Lomzov, A. A., Zharkov, D. O. & Fedorova, O. S., 1 Oct 2017, In: Molecular BioSystems. 13, 10, p. 1954-1966 13 p.

    Research output: Contribution to journal › Article › peer-review

  38. Processing of the abasic sites clustered with the benzo[a]pyrene adducts by the base excision repair enzymes

    Starostenko, L. V., Rechkunova, N. I., Lebedeva, N. A., Lomzov, A. A., Koval, V. V. & Lavrik, O. I., 1 Feb 2017, In: DNA Repair. 50, p. 43-53 11 p.

    Research output: Contribution to journal › Article › peer-review

ID: 3450118