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  1. 2019

  2. Identification of the xenograft and its ascendant sphere-forming cell line as belonging to EBV-induced lymphoma, and characterization of the status of sphere-forming cells

    Dolgova, E. V., Petrova, D. D., Proskurina, A. S., Ritter, G. S., Kisaretova, P. E., Potter, E. A., Efremov, Y. R., Bayborodin, S. I., Karamysheva, T. V., Romanenko, M. V., Netesov, S. V., Taranov, O. S., Ostanin, A. A., Chernykh, E. R. & Bogachev, S. S., 6 May 2019, In: Cancer Cell International. 19, 1, p. 120 21 p., 120.

    Research output: Contribution to journal › Article › peer-review

  3. Spatial heterogeneity promotes antagonistic evolutionary scenarios in microbial community explained by ecological stratification: a simulation study

    Klimenko, A. I., Matushkin, Y. G., Kolchanov, N. A. & Lashin, S. A., 1 May 2019, In: Ecological Modelling. 399, p. 66-76 11 p.

    Research output: Contribution to journal › Article › peer-review

  4. Synthesis, hypolipidemic and antifungal activity of tetrahydroberberrubine sulfonates

    Nechepurenko, I. V., Shirokova, E. D., Khvostov, M. V., Frolova, T. S., Sinitsyna, O. I., Maksimov, A. M., Bredikhin, R. A., Komarova, N. I., Fadeev, D. S., Luzina, O. A., Tolstikova, T. G. & Salakhutdinova, N. F., 1 May 2019, In: Russian Chemical Bulletin. 68, 5, p. 1052-1060 9 p.

    Research output: Contribution to journal › Article › peer-review

  5. Novel mouse monoclonal antibodies specifically recognizing beta-(1 -> 3)-D-glucan antigen

    Matveev, A. L., Krylov, V. B., Khlusevich, Y. A., Baykov, I. K., Yashunsky, D. V., Emelyanova, L. A., Tsvetkov, Y. E., Karelin, A. A., Bardashova, A. V., Wong, S. S. W., Aimanianda, V., Latgé, J. P., Tikunova, N. V. & Nifantiev, N. E., 25 Apr 2019, In: PLoS ONE. 14, 4, p. e0215535 19 p., 0215535.

    Research output: Contribution to journal › Article › peer-review

  6. The role of Patronin in Drosophila mitosis

    Pavlova, G. A., Razuvaeva, A. V., Popova, J. V., Andreyeva, E. N., Yarinich, L. A., Lebedev, M. O., Pellacani, C., Bonaccorsi, S., Somma, M. P., Gatti, M. & Pindyurin, A. V., 17 Apr 2019, In: BMC Molecular and Cell Biology. 20, Suppl 1, p. 7 13 p., 7.

    Research output: Contribution to journal › Article › peer-review

  7. Neutral and Negatively Charged Phosphate Modifications Altering Thermal Stability, Kinetics of Formation and Monovalent Ion Dependence of DNA G-Quadruplexes

    Su, Y., Fujii, H., Burakova, E. A., Chelobanov, B. P., Fujii, M., Stetsenko, D. A. & Filichev, V. V., 15 Apr 2019, In: Chemistry - An Asian Journal. 14, 8, p. 1212-1220 9 p.

    Research output: Contribution to journal › Article › peer-review

  8. Post-exposure administration of chimeric antibody protects mice against European, Siberian, and Far-Eastern subtypes of tickborne encephalitis virus

    Matveev, A. L., Kozlova, I. V., Stronin, O. V., Khlusevich, Y. A., Doroshchenko, E. K., Baykov, I. K., Lisak, O. V., Emelyanova, L. A., Suntsova, O. V., Matveeva, V. A., Savinova, J. S. & Tikunova, N. V., 8 Apr 2019, In: PLoS ONE. 14, 4, 14 p., 0215075.

    Research output: Contribution to journal › Article › peer-review

  9. Development and characterization of novel 2′-F-RNA aptamers specific to human total and glycated hemoglobins

    Davydova, A., Vorobyeva, M., Bashmakova, E., Vorobjev, P., Krasheninina, O., Tupikin, A., Kabilov, M., Krasitskaya, V., Frank, L. & Venyaminova, A., 1 Apr 2019, In: Analytical Biochemistry. 570, p. 43-50 8 p.

    Research output: Contribution to journal › Article › peer-review

  10. Genetic content of the neo-sex chromosomes in ctenonotus and norops (squamata, dactyloidae) and degeneration of the y chromosome as revealed by high-throughput sequencing of individual chromosomes

    Lisachov, A. P., Makunin, A. I., Giovannotti, M., Pereira, J. C., Druzhkova, A. S., Caputo Barucchi, V., Ferguson-Smith, M. A. & Trifonov, V. A., 1 Apr 2019, In: Cytogenetic and Genome Research. 157, 1-2, p. 115-122 8 p.

    Research output: Contribution to journal › Article › peer-review

  11. Relation between Tetraspanin- Associated and Tetraspanin- Non- Associated Exosomal Proteases and Metabolic Syndrome in Colorectal Cancer Patients

    Tugutova, E. A., Svetlana N, S. N., Patysheva, M. R., Afanas’ev, S. G., Tsydenova, A. A., Grigor’eva, A. E., Kolegova, E. S., Kondakova, I. V. & Yunusova, N. V., 26 Mar 2019, In: Asian Pacific journal of cancer prevention : APJCP. 20, 3, p. 809-815 7 p.

    Research output: Contribution to journal › Article › peer-review

  12. Antimetastatic Activity of Combined Topotecan and Tyrosyl-DNA Phosphodiesterase-1 Inhibitor on Modeled Lewis Lung Carcinoma

    Koldysheva, E. V., Men’shchikova, A. P., Lushnikova, E. L., Popova, N. A., Kaledin, V. I., Nikolin, V. P., Zakharenko, A. L., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., 15 Mar 2019, In: Bulletin of Experimental Biology and Medicine. 166, 5, p. 661-666 6 p.

    Research output: Contribution to journal › Article › peer-review

  13. Conformational Dynamics of Damage Processing by Human DNA Glycosylase NEIL1

    Kladova, O. A., Grin, I. R., Fedorova, O. S., Kuznetsov, N. A. & Zharkov, D. O., 15 Mar 2019, In: Journal of Molecular Biology. 431, 6, p. 1098-1112 15 p.

    Research output: Contribution to journal › Article › peer-review

  14. Applying Patient-Specific Induced Pluripotent Stem Cells to Create a Model of Hypertrophic Cardiomyopathy

    Dementyeva, E. V., Medvedev, S. P., Kovalenko, V. R., Vyatkin, Y. V., Kretov, E. I., Slotvitsky, M. M., Shtokalo, D. N., Pokushalov, E. A. & Zakian, S. M., 1 Mar 2019, In: Biochemistry (Moscow). 84, 3, p. 291-298 8 p.

    Research output: Contribution to journal › Article › peer-review

  15. Dynamic light scattering study of base excision DNA repair proteins and their complexes

    Vasil'eva, I. A., Anarbaev, R. O., Moor, N. A. & Lavrik, O. I., 1 Mar 2019, In: Biochimica et Biophysica Acta - Proteins and Proteomics. 1867, 3, p. 297-305 9 p.

    Research output: Contribution to journal › Article › peer-review

  16. New Spin Probes: Tri- and Hexacationic Derivatives of Stable Tetrathiatriarylmethyl Radicals

    Trukhin, D. V., Rogozhnikova, O. Y., Troitskaya, T. I., Kuzhelev, A. A., Amosov, E. V., Halpern, H. J., Koval’, V. V. & Tormyshev, V. M., 1 Mar 2019, In: Russian Journal of Organic Chemistry. 55, 3, p. 296-301 6 p.

    Research output: Contribution to journal › Article › peer-review

  17. The human ribosome can interact with the abasic site in mRNA via a specific peptide of the uS3 protein located near the mRNA entry channel

    Ochkasova, A. S., Meschaninova, M. I., Venyaminova, A. G., Ivanov, A. V., Graifer, D. M. & Karpova, G. G., 1 Mar 2019, In: Biochimie. 158, p. 117-125 9 p.

    Research output: Contribution to journal › Article › peer-review

  18. Establishment of primary human breast cancer cell lines using "pulsed hypoxia" method and development of metastatic tumor model in immunodeficient mice

    Nushtaeva, A. A., Karpushina, A. A., Ermakov, M. S., Gulyaeva, L. F., Gerasimov, A. V., Sidorov, S. V., Gayner, T. A., Yunusova, A. Y., Tkachenko, A. V., Richter, V. A. & Koval, O. A., 28 Feb 2019, In: Cancer Cell International. 19, 1, p. 46 19 p., 46.

    Research output: Contribution to journal › Article › peer-review

  19. Topological aspects of the design of nanocarriers for therapeutic peptides and proteins

    Knauer, N., Pashkina, E. & Apartsin, E., 21 Feb 2019, In: Pharmaceutics. 11, 2, 18 p., 91.

    Research output: Contribution to journal › Review article › peer-review

  20. Molecular Dynamics Simulation of Polarizable Gold Nanoparticles Interacting with Sodium Citrate

    Perfilieva, O. A., Pyshnyi, D. V. & Lomzov, A. A., 12 Feb 2019, In: Journal of Chemical Theory and Computation. 15, 2, p. 1278-1292 15 p.

    Research output: Contribution to journal › Article › peer-review

  21. First report on B chromosome content in a reptilian species: the case of Anolis carolinensis

    Kichigin, I. G., Lisachov, A. P., Giovannotti, M., Makunin, A. I., Kabilov, M. R., O’Brien, P. C. M., Ferguson-Smith, M. A., Graphodatsky, A. S. & Trifonov, V. A., 11 Feb 2019, In: Molecular Genetics and Genomics. 294, 1, p. 13-21 9 p.

    Research output: Contribution to journal › Article › peer-review

  22. The effect of 16S rRNA region choice on bacterial community metabarcoding results

    Букин, Ю., Галачьянц, Ю., Морозов, И. В., Букин, С., Захаренко, А. & Земская, Т., 5 Feb 2019, In: Scientific Data. 6, p. 190007 14 p., 190007.

    Research output: Contribution to journal › Article › peer-review

  23. Autoimmunity and immune system dysregulation in schizophrenia: IgGs from sera of patients hydrolyze myelin basic protein

    Parshukova, D., Smirnova, L. P., Ermakov, E. A., Bokhan, N. A., Semke, A. V., Ivanova, S. A., Buneva, V. N. & Nevinsky, G. A., 1 Feb 2019, In: Journal of Molecular Recognition. 32, 2, 13 p., e2759.

    Research output: Contribution to journal › Article › peer-review

  24. Hydroxylation of protein constituents of the human translation system: Structural aspects and functional assignments

    Graifer, D., Malygin, A. & Karpova, G., 1 Feb 2019, In: Future Medicinal Chemistry. 11, 4, p. 357-369 13 p.

    Research output: Contribution to journal › Review article › peer-review

  25. Increasing bioavailability of very poorly water-soluble compounds. A case study of an anti-tumor drug, soloxolon methyl

    Ogienko, A. G., Markov, A. V., Sen'kova, A. V., Logashenko, E. B., Salomatina, O. V., Myz, S. A., Ogienko, A. A., Nefedov, A. A., Losev, E. A., Drebushchak, T. N., Salakhutdinov, N. F., Boldyrev, V. V., Vlasov, V. V., Zenkova, M. A. & Boldyreva, E. V., 1 Feb 2019, In: Journal of Drug Delivery Science and Technology. 49, p. 35-42 8 p.

    Research output: Contribution to journal › Article › peer-review

  26. Optimization of nucleosome assembling from histones and model DNAs and estimation of the reconstitution efficiency

    Kutuzov, M. M., Kurgina, T. A., Belousova, E. A., Khodyreva, S. N. & Lavrik, O. I., 1 Feb 2019, In: Biopolymers and Cell. 35, 2, p. 91-98 8 p.

    Research output: Contribution to journal › Article › peer-review

  27. 3D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin

    Fishman, V., Battulin, N., Nuriddinov, M., Maslova, A., Zlotina, A., Strunov, A., Chervyakova, D., Korablev, A., Serov, O. & Krasikova, A., 25 Jan 2019, In: Nucleic Acids Research. 47, 2, p. 648-665 18 p.

    Research output: Contribution to journal › Article › peer-review

  28. Protease cargo in circulating exosomes of breast cancer and ovarian cancer patients

    Tamkovich, S. N., Yunusova, N. V., Tugutova, E., Somov, A. K., Proskura, K. V., Kolomiets, L. A., Stakheeva, M. N., Grigor'eva, A. E., Laktionov, P. P. & Kondakova, I. V., 25 Jan 2019, In: Asian Pacific Journal of Cancer Prevention. 20, 1, p. 255-262 8 p.

    Research output: Contribution to journal › Article › peer-review

  29. The analysis of textural images on the basis of orthogonal transformations

    Abdikerimova, G. B., Murzin, F. A., Bychkov, A. L., Wei, X., Ryabchikova, E. I. & Ayazbayev, T., 15 Jan 2019, In: Journal of Theoretical and Applied Information Technology. 97, 1, p. 15-22 8 p.

    Research output: Contribution to journal › Article › peer-review

  30. Boosting of the cytotoxic effect of RNAs by using the pro-apoptotic protein lactaptin for delivery of nucleic acids into cancer cells

    Golubitskaya, E., Chinak, O., Pyshnaya, I. A., Stepanov, G., Juravlev, E., Richter, K. & Koval, O., 3 Jan 2019, In: Cell Death Discovery. 5, 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  31. Implication of immune system in Vaccinia virus-induced cell death

    Koval, O., Kochneva, G., Troitskaya, O., Tkachenko, A., Nushtaeva, A., Kuligina, E. & Richter, V., 3 Jan 2019, In: Cell Death Discovery. 5, 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  32. Population genetic structure and phylogeography of sterlet (Acipenser ruthenus, Acipenseridae) in the Ob and Yenisei river basins

    Pobedintseva, M. A., Makunin, A. I., Kichigin, I. G., Kulemzina, A. I., Serdyukova, N. A., Romanenko, S. A., Vorobieva, N. V., Interesova, E. A., Korentovich, M. A., Zaytsev, V. F., Mischenko, A. V., Zadelenov, V. A., Yurchenko, A. A., Sherbakov, D. Y., Graphodatsky, A. S. & Trifonov, V. A., 2 Jan 2019, In: Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis. 30, 1, p. 156-164 9 p.

    Research output: Contribution to journal › Article › peer-review

  33. Anti-inflammatory Effects of Variola Virus TNF Decoy Receptor in an Experimental Model of Contact Dermatitis

    Viazovaia, E. A., Gileva, I. P., Toporkova, L. B., Shchelkunov, S. N. & Orlovskaya, I. A., 1 Jan 2019, In: Current Pharmaceutical Biotechnology. 19, 11, p. 910-916 7 p.

    Research output: Contribution to journal › Article › peer-review

  34. A rare case of Waardenburg syndrome with unilateral hearing loss caused by nonsense variant c.772C>T (p.Arg259*) in the MITF gene in Yakut patient from the Eastern Siberia (Sakha Republic, Russia)

    Barashkov, N. A., Romanov, G. P., Borisova, U. P., Solovyev, A. V., Pshennikova, V. G., Teryutin, F. M., Bondar, A. A., Morozov, I. V., Khusnutdinova, E. K., Posukh, O. L., Burtseva, T. E., Odland, J. Ø. & Fedorova, S. A., 1 Jan 2019, In: International Journal of Circumpolar Health. 78, 1, p. 1630219 1630219.

    Research output: Contribution to journal › Article › peer-review

  35. Blood circulating exosomes contain distinguishable fractions of free and cell-surface-associated vesicles

    Tamkovich, S., Tutanov, O., Efimenko, A., Grigor’eva, A., Ryabchikova, E., Kirushina, N., Vlassov, V., Tkachuk, V. & Laktionov, P., 1 Jan 2019, In: Current Molecular Medicine. 19, 4, p. 273-285 13 p.

    Research output: Contribution to journal › Article › peer-review

  36. Comparison of Predictive in Silico Tools on Missense Variants in GJB2, GJB6, and GJB3 Genes Associated with Autosomal Recessive Deafness 1A (DFNB1A)

    Pshennikova, V. G., Barashkov, N. A., Romanov, G. P., Teryutin, F. M., Solov'ev, A. V., Gotovtsev, N. N., Nikanorova, A. A., Nakhodkin, S. S., Sazonov, N. N., Morozov, I. V., Bondar, A. A., Dzhemileva, L. U., Khusnutdinova, E. K., Posukh, O. L. & Fedorova, S. A., 1 Jan 2019, In: Scientific World Journal. 2019, p. 5198931 5198931.

    Research output: Contribution to journal › Article › peer-review

  37. Genome constitution and differentiation of subgenomes in Siberian and Far Eastern endemic species of the genus Elymus (Poaceae) according to the sequencing of the nuclear gene waxy

    Agafonov, A. V., Asbaganov, S. V., Shabanova, E. V., Morozov, I. V. & Bondar, A. A., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 7, p. 817-826 10 p.

    Research output: Contribution to journal › Article › peer-review

  38. Immunogenicity of recombinant fragment of orthopoxvirus p35 protein in mice

    Khlusevich, Y. A., Matveev, A. L., Goncharova, E. P., Baykov, I. K. & Tikunova, N. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 4, p. 398-404 7 p.

    Research output: Contribution to journal › Article › peer-review

  39. Inhibitory Effect of New Semisynthetic Usnic Acid Derivatives on Human Tyrosyl-DNA Phosphodiesterase 1

    Dyrkheeva, N., Luzina, O., Filimonov, A., Zakharova, O., Ilina, E., Zakharenko, A., Kuprushkin, M., Nilov, D., Gushchina, I., Švedas, V., Salakhutdinov, N. & Lavrik, O., 1 Jan 2019, In: Planta Medica. 85, 2, p. 103-111 9 p.

    Research output: Contribution to journal › Article › peer-review

  40. Investigation of the cytotoxic effects of magnesium alloys on cell cultures

    Frolova, T. S., Boykov, A. A., Tarkova, A. R., Orishchenko, K. E., Prokhorikhin, A. A., Malaev, D. U., Sinitsina, O. I., Baystrukov, V. I., Kretov, E. I., Pryamov, M. V., Merson, D. L. & Vinogradov, A. Y., 1 Jan 2019, In: Patologiya Krovoobrashcheniya i Kardiokhirurgiya. 23, 3, p. 22-29 8 p.

    Research output: Contribution to journal › Article › peer-review

  41. Novel inhibitors of DNA repair enzyme TDP1 combining monoterpenoid and adamantane fragments

    Mozhaitsev, E. S., Zakharenko, A. L., Suslov, E. V., Korchagina, D. V., Zakharova, O. D., Vasil’eva, I. A., Chepanova, A. A., Black, E., Patel, J., Chand, R., Reynisson, J., Leung, I. K. H., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2019, In: Anti-Cancer Agents in Medicinal Chemistry. 19, 4, p. 463-472 10 p.

    Research output: Contribution to journal › Article › peer-review

  42. Novel tyrosyl-DNA phosphodiesterase 1 inhibitors enhance the therapeutic impact of topoteсan on in vivo tumor models

    Zakharenko, A. L., Luzina, O. A., Sokolov, D. N., Kaledin, V. I., Nikolin, V. P., Popova, N. A., Patel, J., Zakharova, O. D., Chepanova, A. A., Zafar, A., Reynisson, J., Leung, E., Leung, I. K. H., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jan 2019, In: European Journal of Medicinal Chemistry. 161, p. 581-593 13 p.

    Research output: Contribution to journal › Article › peer-review

  43. Orientation-controlled, low-temperature plasma growth and applications of h-BN nanosheets

    Merenkov, I. S., Myshenkov, M. S., Zhukov, Y. M., Sato, Y., Frolova, T. S., Danilov, D. V., Kasatkin, I. A., Medvedev, O. S., Pushkarev, R. V., Sinitsyna, O. I., Terauchi, M., Zvereva, I. A., Kosinova, M. L. & Ostrikov, K., 1 Jan 2019, In: Nano Research. 12, 1, p. 91-99 9 p.

    Research output: Contribution to journal › Article › peer-review

  44. Poly(ADP-ribose) polymerases in regulation of DNA repair

    Lavrik, O., 1 Jan 2019, In: Biopolymers and Cell. 35, 3, p. 182-183 2 p.

    Research output: Contribution to journal › Article › peer-review

  45. Replication timing in Drosophila and its peculiarities in polytene chromosomes

    Kolesnikova, T. D., Antonenko, O. V. & Makunin, I. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 2, p. 140-147 8 p.

    Research output: Contribution to journal › Article › peer-review

  46. The development of tyrosyl-DNA phosphodyesterase 1 (TDP1) inhibitors based on the amines combining aromatic/heteroaromatic and monoterpenoid moieties

    Mozhaitsev, E., Suslov, E., Demidova, Y., Korchagina, D., Volcho, K., Zakharenko, A., Vasil’eva, I., Kupryushkin, M., Chepanova, A., Ayine-Tora, D. M., Reynisson, J., Salakhutdinov, N. & Lavrik, O., 1 Jan 2019, In: Letters in Drug Design and Discovery. 16, 5, p. 597-605 9 p.

    Research output: Contribution to journal › Article › peer-review

  47. The effect of differences in the third domain of the glycoprotein E of tick-borne encephalitis virus of the Far Eastern, Siberian and European subtypes on the binding of recombinant D3 proteins with a chimeric antibody

    Baykov, I. K., Matveev, A. L., Emelianova, L. A., Kaverina, G. B., Tkachev, S. E. & Tikunova, N. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 256-261 6 p.

    Research output: Contribution to journal › Article › peer-review

  48. Thermodynamics of the DNA repair process by endonuclease VIII

    Kladova, O. A., Kuznetsov, N. A. & Fedorova, O. S., 1 Jan 2019, In: Acta Naturae. 11, 1, p. 29-37 9 p.

    Research output: Contribution to journal › Article › peer-review

  49. Unrepairable analogous of nucleotide excision repair substrates as a potential anti-cancer drugs

    Evdokimov, A. N., Dol-Gova, E. V., Popov, A. A., Petruse-Va, I. O., Bogachev, S. S. & Lavrik, O. I., 1 Jan 2019, In: Biopolymers and Cell. 35, 3, p. 180-181 2 p.

    Research output: Contribution to journal › Article › peer-review

  50. Unrepairable substrates of nucleotide excision repair and their application to suppress the activity of this repair system

    Popov, A. A., Evdokimov, A. N., Lukyanchikova, N. V., Petruseva, I. O. & Lavrik, O. I., 1 Jan 2019, In: Biopolymers and Cell. 35, 2, p. 107-117 11 p.

    Research output: Contribution to journal › Article › peer-review

  51. abstract OR-3: Fleeting ensembles: Transient protein-protein interactions in DNA repair

    Жарков, Д. О., 2019, In: International Journal of Biomedicine. 9, S1, p. 6-7 2 p.

    Research output: Contribution to journal › Conference article › peer-review

  52. Catalytic antibodies as a new evidence of the humoral immune system dysfunction in schizophrenia

    Ermakov, E., Ivanova, S., Semke, A., Dmitrenok, P., Buneva, V. & Nevinsky, G., 2019, In: European Neuropsychopharmacology. 29, p. S586-S586 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  53. Вирусы гриппа. Методы

    Ильичёва, Т. Н., Нетёсов, С. В. & Гуреев, В. Н., 2019, Новосибирск: ИПЦ НГУ. 258 p.

    Research output: Book/Report › Book › Research › peer-review

  54. 2018

  55. Design and properties of ligand-conjugated guanine oligonucleotides for recovery of mutated G-quadruplexes

    Takahashi, S., Chelobanov, B., Kim, K. T., Kim, B. H., Stetsenko, D. & Sugimoto, N., 6 Dec 2018, In: Molecules. 23, 12, 13 p., 3228.

    Research output: Contribution to journal › Article › peer-review

  56. BRCA-analyzer: Automatic workflow for processing NGS reads of BRCA1 and BRCA2 genes

    Kechin, A., Khrapov, E., Boyarskikh, U., Kel, A. & Filipenko, M., 1 Dec 2018, In: Computational Biology and Chemistry. 77, p. 297-306 10 p.

    Research output: Contribution to journal › Article › peer-review

  57. Changes in cell differentiation and proliferation lead to production of abzymes in EAE mice treated with DNA–Histone complexes

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sedykh, S. E., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2018, In: Journal of Cellular and Molecular Medicine. 22, 12, p. 5816-5832 17 p.

    Research output: Contribution to journal › Article › peer-review

  58. Cryptic divergences in the genus Pisum L. (peas), as revealed by phylogenetic analysis of plastid genomes

    Bogdanova, V. S., Mglinets, A. V., Shatskaya, N. V., Kosterin, O. E., Solovyev, V. I. & Vasiliev, G. V., 1 Dec 2018, In: Molecular Phylogenetics and Evolution. 129, p. 280-290 11 p.

    Research output: Contribution to journal › Article › peer-review

  59. Extremely stable high molecular mass soluble multiprotein complex from eggs of sea urchin Strongylocentrotus intermedius with phosphatase activity

    Soboleva, S. E., Burkova, E. E., Dmitrenok, P. S., Bulgakov, D. V., Menzorova, N. I., Buneva, V. N. & Nevinsky, G. A., 1 Dec 2018, In: Journal of Molecular Recognition. 31, 12, 12 p., e2753.

    Research output: Contribution to journal › Article › peer-review

  60. New slbo-Gal4 driver lines for the analysis of border cell migration during Drosophila oogenesis

    Ogienko, A. A., Yarinich, L. A., Fedorova, E. V., Lebedev, M. O., Andreyeva, E. N., Pindyurin, A. V. & Baricheva, E. M., 1 Dec 2018, In: Chromosoma. 127, 4, p. 475-487 13 p.

    Research output: Contribution to journal › Article › peer-review

  61. Replication protein A as a modulator of the poly(ADP-ribose)polymerase 1 activity

    Maltseva, E. A., Krasikova, Y. S., Sukhanova, M. V., Rechkunova, N. I. & Lavrik, O. I., 1 Dec 2018, In: DNA Repair. 72, p. 28-38 11 p.

    Research output: Contribution to journal › Article › peer-review

  62. Substrate specificity of human apurinic/apyrimidinic endonuclease APE1 in the nucleotide incision repair pathway

    Kuznetsova, A. A., Matveeva, A. G., Milov, A. D., Vorobjev, Y. N., Dzuba, S. A., Fedorova, O. S. & Kuznetsov, N. A., 30 Nov 2018, In: Nucleic Acids Research. 46, 21, p. 11454-11465 12 p.

    Research output: Contribution to journal › Article › peer-review

  63. Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation

    Gruber, D. R., Toner, J. J., Miears, H. L., Shernyukov, A. V., Kiryutin, A. S., Lomzov, A. A., Endutkin, A. V., Grin, I. R., Petrova, D. V., Kupryushkin, M. S., Yurkovskaya, A. V., Johnson, E. C., Okon, M., Bagryanskaya, E. G., Zharkov, D. O. & Smirnov, S. L., 16 Nov 2018, In: Nucleic Acids Research. 46, 20, p. 10827-10839 13 p.

    Research output: Contribution to journal › Article › peer-review

  64. High-frequency pulsed electron-electron double resonance spectroscopy on DNA duplexes using trityl tags and shaped microwave pulses

    Kuzhelev, A., Akhmetzyanov, D., Denysenkov, V., Shevelev, G., Krumkacheva, O., Bagryanskaya, E. & Prisner, T., 7 Nov 2018, In: Physical Chemistry Chemical Physics. 20, 41, p. 26140-26144 5 p.

    Research output: Contribution to journal › Article › peer-review

  65. Nucleotide modifications decrease innate immune response induced by synthetic analogs of snRNAs and snoRNAs

    Stepanov, G., Zhuravlev, E., Shender, V., Nushtaeva, A., Balakhonova, E., Mozhaeva, E., Kasakin, M., Koval, V., Lomzov, A., Pavlyukov, M., Malyants, I., Zhorov, M., Kabilova, T., Chernolovskaya, E., Govorun, V., Kuligina, E., Semenov, D. & Richter, V., 2 Nov 2018, In: Genes. 9, 11, 18 p., 531.

    Research output: Contribution to journal › Article › peer-review

  66. A mosaic intragenic microduplication of LAMA1 and a constitutional 18p11.32 microduplication in a patient with keratosis pilaris and intellectual disability

    Kashevarova, A. A., Nazarenko, L. P., Skryabin, N. A., Nikitina, T. V., Vasilyev, S. A., Tolmacheva, E. N., Lopatkina, M. E., Salyukova, O. A., Chechetkina, N. N., Vorotelyak, E. A., Kalabusheva, E. P., Fishman, V. S., Kzhyshkowska, J., Graziano, C., Magini, P., Romeo, G. & Lebedev, I. N., 1 Nov 2018, In: American Journal of Medical Genetics, Part A. 176, 11, p. 2395-2403 9 p.

    Research output: Contribution to journal › Article › peer-review

  67. Corrigendum to: Polymorphisms of genes involved in inflammation and blood vessel development influence the risk of varicose veins (Clinical Genetics, (2018), 94, 2, (191-199), 10.1111/cge.13362): Polymorphisms of genes involved in inflammation and blood vessel development influence the risk of varicose veins

    Shadrina, A., Tsepilov, Y., Smetanina, M., Voronina, E., Seliverstov, E., Ilyukhin, E., Kirienko, A., Zolotukhin, I. & Filipenko, M., 1 Nov 2018, In: Clinical Genetics. 94, 5, p. 491 1 p.

    Research output: Contribution to journal › Comment/debate › peer-review

  68. Excision of Carbohydrate-Modified dNMP Analogues from DNA 3' end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)

    Dyrkheeva, N. S., Lebedeva, N. A., Sherstyuk, Y. V., Abramova, T. V., Silnikov, V. N. & Lavrik, O. I., 1 Nov 2018, In: Molekuliarnaia biologiia. 52, 6, p. 1066-1073 8 p.

    Research output: Contribution to journal › Article › peer-review

  69. Excision of Carbohydrate-Modified dNMP Analogues from DNA 3' end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)

    Dyrkheeva, N. S., Lebedeva, N. A., Sherstyuk, Y. V., Abramova, T. V., Silnikov, V. N. & Lavrik, O. I., 1 Nov 2018, In: Molecular Biology. 52, 6, p. 922-928 7 p.

    Research output: Contribution to journal › Article › peer-review

  70. Modified Oligonucleotides for Guiding RNA Cleavage Using Bacterial RNase P

    Novopashina, D. S., Nazarov, A. S., Vorobjeva, M. A., Kuprushkin, M. S., Davydova, A. S., Lomzov, A. A., Pyshnyi, D. V., Altman, S. & Venyaminova, A. G., 1 Nov 2018, In: Molecular Biology. 52, 6, p. 905-912 8 p.

    Research output: Contribution to journal › Article › peer-review

  71. Modified Oligonucleotides for Guiding RNA Cleavage Using Bacterial RNase P

    Novopashina, D. S., Nazarov, A. S., Vorobjeva, M. A., Kuprushkin, M. S., Davydova, A. S., Lomzov, A. A., Pyshnyi, D. V., Altman, S. & Venyaminova, A. G., 1 Nov 2018, In: Molekuliarnaia biologiia. 52, 6, p. 1045-1054 10 p.

    Research output: Contribution to journal › Article › peer-review

  72. Establishment of Constraints on Amyloid Formation Imposed by Steric Exclusion of Globular Domains

    Azizyan, R. A., Garro, A., Radkova, Z., Anikeenko, A., Bakulina, A., Dumas, C. & Kajava, A. V., 12 Oct 2018, In: Journal of Molecular Biology. 430, 20, p. 3835-3846 12 p.

    Research output: Contribution to journal › Article › peer-review

  73. Multiple intrasyntenic rearrangements and rapid speciation in voles

    Romanenko, S. A., Serdyukova, N. A., Perelman, P. L., Trifonov, V. A., Golenishchev, F. N., Bulatova, N. S., Stanyon, R. & Graphodatsky, A. S., 8 Oct 2018, In: Scientific Reports. 8, 1, p. 14980 9 p., 14980.

    Research output: Contribution to journal › Article › peer-review

  74. Conventional anti-glioblastoma chemotherapy affects proteoglycan composition of brain extracellular matrix in rat experimental model in vivo

    Tsidulko, A. Y., Bezier, C., De La Bourdonnaye, G., Suhovskih, A. V., Pankova, T. M., Kazanskaya, G. M., Aidagulova, S. V. & Grigorieva, E. V., 2 Oct 2018, In: Frontiers in Pharmacology. 9, OCT, p. 1104 13 p., 1104.

    Research output: Contribution to journal › Article › peer-review

  75. Data on PAGE analysis and MD simulation for the interaction of endonuclease Apn1 from Saccharomyces cerevisiae with DNA substrates containing 5,6-dihydrouracyl and 2-aminopurine

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Oct 2018, In: Data in Brief. 20, p. 1515-1524 10 p.

    Research output: Contribution to journal › Article › peer-review

  76. Humoral immunity to influenza in an at-risk population and severe influenza cases in Russia in 2016–2017

    Ilyicheva, T. N., Durymanov, A. G., Svyatchenko, S. V., Marchenko, V. Y., Sobolev, I. A., Bakulina, A. Y., Goncharova, N. I., Kolosova, N. P., Susloparov, I. M., Pyankova, O. G., Ryzhikov, A. B. & Maksyutov, R. A., 1 Oct 2018, In: Archives of Virology. 163, 10, p. 2675-2685 11 p.

    Research output: Contribution to journal › Article › peer-review

  77. The rRNA Gene Containing Marker Chromosome Associated with a Intellectual Disability: A Clinical Case Report

    Telepova, A. S., Romanenko, S. A., Lemskaya, N. A., Maksimova, Y. V., Shorina, A. R. & Yudkin, D. V., 1 Oct 2018, In: Molecular Genetics, Microbiology and Virology. 33, 4, p. 241-244 4 p.

    Research output: Contribution to journal › Article › peer-review

  78. A novel class of tyrosyl-DNA phosphodiesterase 1 inhibitors that contains the octahydro-2H-chromen-4-ol scaffold

    Li-Zhulanov, N. S., Zakharenko, A. L., Chepanova, A. A., Patel, J., Zafar, A., Volcho, K. P., Salakhutdinov, N. F., Reynisson, J., Leung, I. K. H. & Lavrik, O. I., 26 Sept 2018, In: Molecules. 23, 10, 14 p., 2468.

    Research output: Contribution to journal › Article › peer-review

  79. B chromosomes of the asian seabass (Lates calcarifer) contribute to genome variations at the level of individuals and populations

    Komissarov, A., Vij, S., Yurchenko, A., Trifonov, V., Thevasagayam, N., Saju, J., Sridatta, P. S. R., Purushothaman, K., Graphodatsky, A., Orbán, L. & Kuznetsova, I., 20 Sept 2018, In: Genes. 9, 10, p. 1.-15 15 p., 464.

    Research output: Contribution to journal › Article › peer-review

  80. OpenWorm: Overview and recent advances in integrative biological simulation of Caenorhabditis elegans

    Sarma, G. P., Lee, C. W., Portegys, T., Ghayoomie, V., Jacobs, T., Alicea, B., Cantarelli, M., Currie, M., Gerkin, R. C., Gingell, S., Gleeson, P., Gordon, R., Hasani, R. M., Idili, G., Khayrulin, S., Lung, D., Palyanov, A., Watts, M. & Larson, S. D., 10 Sept 2018, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 373, 1758, 10 p., 20170382.

    Research output: Contribution to journal › Article › peer-review

  81. Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis

    Palyanov, A., Khayrulin, S. & Larson, S. D., 10 Sept 2018, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 373, 1758, 10 p., 20170376.

    Research output: Contribution to journal › Article › peer-review

  82. Novel group of tyrosyl-DNA-phosphodiesterase 1 inhibitors based on disaccharide nucleosides as drug prototypes for anti-cancer therapy

    Komarova, A. O., Drenichev, M. S., Dyrkheeva, N. S., Kulikova, I. V., Oslovsky, V. E., Zakharova, O. D., Zakharenko, A. L., Mikhailov, S. N. & Lavrik, O. I., 7 Sept 2018, In: Journal of Enzyme Inhibition and Medicinal Chemistry. 33, 1, p. 1415-1429 15 p.

    Research output: Contribution to journal › Article › peer-review

  83. Apurinic/apyrimidinic endonuclease Apn1 from Saccharomyces cerevisiae is recruited to the nucleotide incision repair pathway: Kinetic and structural features

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Sept 2018, In: Biochimie. 152, p. 53-62 10 p.

    Research output: Contribution to journal › Article › peer-review

  84. Low-pass single-chromosome sequencing of human small supernumerary marker chromosomes (sSMCs) and Apodemus B chromosomes

    Makunin, A. I., Rajičić, M., Karamysheva, T. V., Romanenko, S. A., Druzhkova, A. S., Blagojević, J., Vujošević, M., Rubtsov, N. B., Graphodatsky, A. S. & Trifonov, V. A., 1 Sept 2018, In: Chromosoma. 127, 3, p. 301-311 11 p.

    Research output: Contribution to journal › Article › peer-review

  85. Kinetic features of 30-50 exonuclease activity of human AP-endonuclease ape1

    Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., 21 Aug 2018, In: Molecules. 23, 9, 14 p., 2101.

    Research output: Contribution to journal › Article › peer-review

  86. Evolutionary sex chromosome translocations in amniotes

    Trifonov, V. A., Lisachov, A. P., Kichigin, I. G., Makunin, A. I., Pereira, J. C., Druzhkova, A. S., Ferguson-Smith, M. A. & Giovannotti, M., 16 Aug 2018, In: Comparative Cytogenetics. 12, 3, p. 304-305 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  87. Analysis of new charge-neutral DNA/RNA analogues phosphoryl guanidine oligonucleotides (PGO) by gel electrophoresis

    Fokina, A., Wang, M., Ilyina, A., Klabenkova, K., Burakova, E., Chelobanov, B. & Stetsenko, D., 15 Aug 2018, In: Analytical Biochemistry. 555, p. 9-11 3 p.

    Research output: Contribution to journal › Article › peer-review

  88. Synthesis and evaluation of aryliden- and hetarylidenfuranone derivatives of usnic acid as highly potent Tdp1 inhibitors

    Zakharova, O., Luzina, O., Zakharenko, A., Sokolov, D., Filimonov, A., Dyrkheeva, N., Chepanova, A., Ilina, E., Ilyina, A., Klabenkova, K., Chelobanov, B., Stetsenko, D., Zafar, A., Eurtivong, C., Reynisson, J., Volcho, K., Salakhutdinov, N. & Lavrik, O., 15 Aug 2018, In: Bioorganic and Medicinal Chemistry. 26, 15, p. 4470-4480 11 p.

    Research output: Contribution to journal › Article › peer-review

  89. Sequencing of supernumerary chromosomes of red fox and raccoon dog confirms a non-random gene acquisition by B chromosomes

    Makunin, A. I., Romanenko, S. A., Beklemisheva, V. R., Perelman, P. L., Druzhkova, A. S., Petrova, K. O., Prokopov, D. Y., Chernyaeva, E. N., Johnson, J. L., Kukekova, A. V., Yang, F., Ferguson-Smith, M. A., Graphodatsky, A. S. & Trifonov, V. A., 10 Aug 2018, In: Genes. 9, 8, 14 p., 405.

    Research output: Contribution to journal › Article › peer-review

  90. Updated carrier rates for c.35delG (GJB2) associated with hearing loss in Russia and common c.35delG haplotypes in Siberia

    Zytsar, M. V., Barashkov, N. A., Bady-Khoo, M. S., Shubina-Olejnik, O. A., Danilenko, N. G., Bondar, A. A., Morozov, I. V., Solovyev, A. V., Danilchenko, V. Y., Maximov, V. N. & Posukh, O. L., 7 Aug 2018, In: BMC Medical Genetics. 19, 1, p. 138 9 p., 138.

    Research output: Contribution to journal › Article › peer-review

  91. Allele-Specific Biased Expression of the CNTN6 Gene in iPS Cell-Derived Neurons from a Patient with Intellectual Disability and 3p26.3 Microduplication Involving the CNTN6 Gene

    Gridina, M. M., Matveeva, N. M., Fishman, V. S., Menzorov, A. G., Kizilova, H. A., Beregovoy, N. A., Kovrigin, I. I., Pristyazhnyuk, I. E., Oscorbin, I. P., Filipenko, M. L., Kashevarova, A. A., Skryabin, N. A., Nikitina, T. V., Sazhenova, E. A., Nazarenko, L. P., Lebedev, I. N. & Serov, O. L., 1 Aug 2018, In: Molecular Neurobiology. 55, 8, p. 6533-6546 14 p.

    Research output: Contribution to journal › Article › peer-review

  92. Isolation and characterization of a group of new Proteus bacteriophages

    Morozova, V., Kozlova, Y., Shedko, E., Babkin, I., Kurilshikov, A., Bokovaya, O., Bardashova, A., Yunusova, A., Tikunov, A., Tupikin, A., Ushakova, T., Ryabchikova, E. & Tikunova, N., 1 Aug 2018, In: Archives of Virology. 163, 8, p. 2189-2197 9 p.

    Research output: Contribution to journal › Article › peer-review

  93. Isolation, culturing and gene expression profiling of inner mass cells from stable and vulnerable carotid atherosclerotic plaques

    Novikova, O. A., Nazarkina, Z. K., Cherepanova, A. V., Laktionov, P. P., Chelobanov, B. P., Murashov, I. S., Deev, R. V., Pokushalov, E. A., Karpenko, A. A. & Laktionov, P. P., 1 Aug 2018, In: PLoS ONE. 14, 6, p. e0218892 19 p., e0218892.

    Research output: Contribution to journal › Article › peer-review

  94. Taxonomy of the order Mononegavirales: update 2018

    Amarasinghe, G. K., Aréchiga Ceballos, N. G., Banyard, A. C., Basler, C. F., Bavari, S., Bennett, A. J., Blasdell, K. R., Briese, T., Bukreyev, A., Caì, Y., Calisher, C. H., Campos Lawson, C., Chandran, K., Chapman, C. A., Chiu, C. Y., Choi, K. S., Collins, P. L., Dietzgen, R. G., Dolja, V. V., Dolnik, O., & 30 othersDomier, L. L., Dürrwald, R., Dye, J. M., Easton, A. J., Ebihara, H., Echevarría, J. E., Fooks, A. R., Formenty, P. B. H., Fouchier, R. A. M., Freuling, C. M., Ghedin, E., Goldberg, T. L., Hewson, R., Horie, M., Hyndman, T. H., Jiāng, D., Kityo, R., Kobinger, G. P., Kondō, H., Koonin, E. V., Krupovic, M., Kurath, G., Lamb, R. A., Lee, B., Leroy, E. M., Maes, P., Maisner, A., Marston, D. A., Mor, S. K. & Netesov, S. V., 1 Aug 2018, In: Archives of Virology. 163, 8, p. 2283-2294 12 p.

    Research output: Contribution to journal › Article › peer-review

  95. Effect of the relief on the measurement of bond rupture force with the help of AFM: The dynamics of interaction and optimization of the procedure

    Kurus, N. N., Dultsev, F. N., Shevelev, G., Lomzov, A. A. & Pyshnyi, D. V., 28 Jul 2018, In: Analytical Methods. 10, 28, p. 3498-3505 8 p.

    Research output: Contribution to journal › Article › peer-review

  96. Characterization of primary normal and malignant breast cancer cell and their response to chemotherapy and immunostimulatory agents

    Nushtaeva, A. A., Stepanov, G. A., Semenov, D. V., Juravlev, E. S., Balahonova, E. A., Gerasimov, A. V., Sidorov, S. V., Savelyev, E. I., Kuligina, E. V., Richter, V. A. & Koval, O. A., 9 Jul 2018, In: BMC Cancer. 18, 1, p. 728 11 p., 728.

    Research output: Contribution to journal › Article › peer-review

  97. B cell-specific protein FCRLA is expressed by plasmacytoid dendritic cells in humans

    Reshetnikova, E., Guselnikov, S., Volkova, O., Baranov, K., Taranin, A. & Mechetina, L., 1 Jul 2018, In: Cytometry Part B - Clinical Cytometry. 94, 4, p. 683-687 5 p.

    Research output: Contribution to journal › Article › peer-review

  98. p-Toluenesulfonic acid mediated one-pot cascade synthesis and cytotoxicity evaluation of polyfluorinated 2-aryl-2,3-dihydroquinolin-4-ones and their derivatives

    Politanskaya, L., Rybalova, T., Zakharova, O., Nevinsky, G. & Tretyakov, E., 1 Jul 2018, In: Journal of Fluorine Chemistry. 211, p. 129-140 12 p.

    Research output: Contribution to journal › Article › peer-review

  99. Synthesis and Inhibitory Properties of Imines Containing Monoterpenoid and Adamantane Fragments Against DNA Repair Enzyme Tyrosyl-DNA Phosphodiesterase 1 (Tdp1)

    Zakharenko, A. L., Mozhaitsev, E. S., Suslov, E. V., Korchagina, D. V., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 1 Jul 2018, In: Chemistry of Natural Compounds. 54, 4, p. 672-676 5 p.

    Research output: Contribution to journal › Article › peer-review

  100. The Role of Exosomal Tetraspanins and Proteases in Tumor Progression

    Yunusova, N. V., Tugutova, E. A., Tamkovich, S. N. & Kondakova, I. V., 1 Jul 2018, In: Biochemistry (Moscow) Supplement Series B: Biomedical Chemistry. 12, 3, p. 191-202 12 p.

    Research output: Contribution to journal › Article › peer-review

  101. Unusual interaction of human apurinic/apyrimidinic endonuclease 1 (APE1) with abasic sites via the Schiff-base-dependent mechanism

    Ilina, E. S., Khodyreva, S. N. & Lavrik, O. I., 1 Jul 2018, In: Biochimie. 150, p. 88-99 12 p.

    Research output: Contribution to journal › Article › peer-review

  102. Effect of pH on DNA binding and catalysis of human apurinic/apyrimidinic endonuclease 1

    Alekseeva, I., Bakman, A., Vorobjev, Y., Fedorova, O. & Kuznetsov, N., Jul 2018, In: FEBS Open Bio. 8, p. 405-405 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

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