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  1. 2',3'-Dideoxyuridine triphosphate conjugated to SiO2 nanoparticles: Synthesis and evaluation of antiproliferative activity

    Vasilyeva, S. V., Grin, I. R., Chelobanov, B. P. & Stetsenko, D. A., 15 Apr 2018, In: Bioorganic and Medicinal Chemistry Letters. 28, 7, p. 1248-1251 4 p.

    Research output: Contribution to journal › Article › peer-review

  2. 2’-Модифицированные направляющие РНК как компоненты системы геномного редактирования CRISPR/Cas9

    Саковина, Л. В., Вохтанцев, И. П. & Новопашина, Д. С., Oct 2021, p. 332. 1 p.

    Research output: Contribution to conference › Abstract › peer-review

  3. Abasic site-peptide cross-links are blocking lesions repaired by AP endonucleases

    Yudkina, A. V., Bulgakov, N. A., Kim, D. V., Baranova, S. V., Ishchenko, A. A., Saparbaev, M. K., Koval, V. V. & Zharkov, D. O., 7 Jul 2023, In: Nucleic Acids Research. 51, 12, p. 6321-6336 16 p., gkad423.

    Research output: Contribution to journal › Article › peer-review

  4. Aberrant base excision repair pathway of oxidatively damaged DNA: Implications for degenerative diseases

    Talhaoui, I., Matkarimov, B. T., Tchenio, T., Zharkov, D. O. & Saparbaev, M. K., 1 Jun 2017, In: Free Radical Biology and Medicine. 107, p. 266-277 12 p.

    Research output: Contribution to journal › Review article › peer-review

  5. Aberrant repair initiated by the adenine-DNA glycosylase does not play a role in UV-induced mutagenesis in Escherichia coli

    Zutterling, C., Mursalimov, A., Talhaoui, I., Koshenov, Z., Akishev, Z., Bissenbaev, A. K., Mazon, G., Geacintov, N. E., Gasparutto, D., Groisman, R., Zharkov, D. O., Matkarimov, B. T. & Saparbaev, M., 5 Dec 2018, In: PeerJ. 6, 12, 23 p., 6029.

    Research output: Contribution to journal › Article › peer-review

  6. abstract OR-3: Fleeting ensembles: Transient protein-protein interactions in DNA repair

    Жарков, Д. О., 2019, In: International Journal of Biomedicine. 9, S1, p. 6-7 2 p.

    Research output: Contribution to journal › Conference article › peer-review

  7. Activity of DNA glycosylases on non-canonical DNA substrates

    Дятлова, Е. А. & Жарков, Д. О., 2020, p. 568. 1 p.

    Research output: Contribution to conference › Abstract › peer-review

  8. Activity of nsp14 Exonuclease from SARS-CoV-2 towards RNAs with Modified 3'-Termini

    Yuyukina, S. K., Barmatov, A. E., Bizyaev, S. N., Stetsenko, D. A., Sergeeva, O. V., Zatsepin, T. S. & Zharkov, D. O., Apr 2023, In: Doklady. Biochemistry and biophysics. 509, 1, p. 65-69 5 p.

    Research output: Contribution to journal › Article › peer-review

  9. A Low-Activity Polymorphic Variant of Human NEIL2 DNA Glycosylase

    Kakhkharova, Z. I., Zharkov, D. O. & Grin, I. R., 1 Feb 2022, In: International Journal of Molecular Sciences. 23, 4, 2212.

    Research output: Contribution to journal › Article › peer-review

  10. Alternative Mechanisms of Mutagenesis at mCpG Sites during Replication and Repair

    Shilkin, E. S., Petrova, D. V., Zharkov, D. O. & Makarova, A. V., Aug 2023, In: Molecular Biology. 57, 4, p. 584-592 9 p.

    Research output: Contribution to journal › Article › peer-review

  11. A New Class of Uracil-DNA Glycosylase Inhibitors Active against Human and Vaccinia Virus Enzyme

    Grin, I. R., Mechetin, G., Kasymov, R. D., Diatlova, E. A., Yudkina, A., Shchelkunov, S. N., Gileva, I. P., Denisova, A. A., Stepanov, G. A., Chilov, G. G. & Zharkov, D. O., 1 Nov 2021, In: Molecules. 26, 21, 15 p., 6668.

    Research output: Contribution to journal › Article › peer-review

  12. A non-canonical nucleotide from viral genomes interferes with the oxidative DNA damage repair system

    Yudkina, A. V., Endutkin, A. V., Diatlova, E. A. & Zharkov, D. O., Jan 2024, In: DNA Repair. 133, 8 p., 103605.

    Research output: Contribution to journal › Article › peer-review

  13. ANTISENSE CONTAINING NANOCOMPOSITES IN HYPERTENSION TREATMENT IN ISIAH RATS

    Klimov, L., Ryazanova, M., Levina, A. & Markel, A., Oct 2018, In: Journal of Hypertension. 36, p. E18-E18 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  14. Antisense oligonucleotides for the arterial hypertension mechanisms study and therapy

    Klimov, L. O., Seryapina, A. A., Zarytova, V. F., Levina, A. S. & Markel, A. L., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 2, p. 240-247 8 p.

    Research output: Contribution to journal › Review article › peer-review

  15. Antisense Oligonucleotides Immobilized on Silicon-Organic Nanoparticles as a Tool for Prolonged Correction of Hypertensive States

    Levina, A. S., Repkova, M. N., Klimov, L. O., Ryazanova, M. A., Markel, A. L. & Zarytova, V. F., 15 May 2019, In: Bulletin of Experimental Biology and Medicine. 167, 1, p. 116-119 4 p.

    Research output: Contribution to journal › Article › peer-review

  16. Antitumour activity of the ribonuclease binase from bacillus pumilus in the RLS40 tumour model is associated with the reorganisation of the miRNA network and reversion of cancer‐related cascades to normal functioning

    Mohamed, I. S. E., Sen’kova, A. V., Nadyrova, A. I., Savin, I. A., Markov, A. V., Mitkevich, V. A., Makarov, A. A., Ilinskaya, O. N., Mironova, N. L. & Zenkova, M. A., Nov 2020, In: Biomolecules. 10, 11, p. 1-20 20 p., 1509.

    Research output: Contribution to journal › Article › peer-review

  17. Are small nucleolar RNAs "cRISPRable"? A report on box C/D small nucleolar RNA editing in human cells

    Filippova, J. A., Matveeva, A. M., Zhuravlev, E. S., Balakhonova, E. A., Prokhorova, D. V., Malanin, S. J., Mahmud, R. S., Grigoryeva, T. V., Anufrieva, K. S., Semenov, D. V., Vlassov, V. V. & Stepanov, G. A., 4 Nov 2019, In: Frontiers in Pharmacology. 10, 16 p., 01246.

    Research output: Contribution to journal › Article › peer-review

  18. Azo dyes containing 1,3,4-thiadiazole fragment: Synthesis and properties

    Selivanova, G., Skolyapova, A., Wang, J., Karpova, E., Shundrina, I., Bagryanskaya, I. & Amosov, E., 28 Jan 2022, In: New Journal of Chemistry. 46, 4, p. 1929-1942 14 p.

    Research output: Contribution to journal › Article › peer-review

  19. Bacillus pumilus Ribonuclease Inhibits Migration of Human Duodenum Adenocarcinoma HuTu 80 Cells

    Zelenikhin, P., Mohamed, I. S. E., Nadyrova, A., Sirotkina, A. A., Ulyanova, V. V., Mironova, N. L., Mitkevieh, V. A., Makarov, A. A., Zenkova, M. A. & Ilinskaya, O. N., Jan 2020, In: Molecular Biology. 54, 1, p. 128-133 6 p.

    Research output: Contribution to journal › Article › peer-review

  20. Back-Up Base Excision DNA Repair in Human Cells Deficient in the Major AP Endonuclease, APE1

    Kim, D. V., Diatlova, E. A., Zharkov, T. D., Melentyev, V. S., Yudkina, A. V., Endutkin, A. V. & Zharkov, D. O., Jan 2024, In: International Journal of Molecular Sciences. 25, 1, 64.

    Research output: Contribution to journal › Article › peer-review

  21. Base Excision DNA Repair Deficient Cells: From Disease Models to Genotoxicity Sensors

    Kim, D. V., Makarova, A. V., Miftakhova, R. R. & Zharkov, D. O., 1 Jan 2019, In: Current Pharmaceutical Design. 25, 3, p. 298-312 15 p.

    Research output: Contribution to journal › Review article › peer-review

  22. Base Excision DNA Repair in Plants: Arabidopsis and Beyond

    Grin, I. R., Petrova, D. V., Endutkin, A. V., Ma, C., Yu, B., Li, H. & Zharkov, D. O., 29 Sept 2023, In: International Journal of Molecular Sciences. 24, 19, 14746.

    Research output: Contribution to journal › Review article › peer-review

  23. Base excision repair in non-canonical DNA structures

    Дятлова, Е. А., Ерошенко, Д. А. & Жарков, Д. О., 2022, p. 977-978. 2 p.

    Research output: Contribution to conference › Abstract › peer-review

  24. Bioorthogonality in the light of cell defense mechanisms: Interaction of non-natural nucleic acids with the base excision DNA repair system

    Ендуткин, А. В., Юдкина, А. В. & Жарков, Д. О., 2022, p. 982. 1 p.

    Research output: Contribution to conference › Abstract › peer-review

  25. Boron-containing nucleosides as tools for boron-neutron capture therapy

    Zharkov, D. O., Yudkina, A., Riesebeck, T., Loshchenova, P. S., Mostovich, E. A. & Dianov, G. L., 2021, In: American journal of cancer research. 11, 10, p. 4668-4682 15 p.

    Research output: Contribution to journal › Review article › peer-review

  26. Brain as a potential target for antisense oligonucleotide treatment of hypertensive disease. Experimental study on the hypertensive ISIAH rat strain

    Levina, A. S., Zarytova, V. F., Repkova, M. N., Klimov, O. L., Seryapina, A. A., Shikina, N. V., Shevelev, O. B. & Markel, A. L., Dec 2018, In: Basic and Clinical Pharmacology and Toxicology. 124, p. 6-7 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  27. Bypass of Abasic Site-Peptide Cross-Links by Human Repair and Translesion DNA Polymerases

    Yudkina, A. V., Barmatov, A. E., Bulgakov, N. A., Boldinova, E. O., Shilkin, E. S., Makarova, A. V. & Zharkov, D. O., 29 Jun 2023, In: International Journal of Molecular Sciences. 24, 13, 10877.

    Research output: Contribution to journal › Article › peer-review

  28. Cas9 is mostly orthogonal to human systems of DNA break sensing and repair

    Maltseva, E. A., Vasil'eva, I. A., Moor, N. A., Kim, D. V., Dyrkheeva, N. S., Kutuzov, M. M., Vokhtantsev, I. P., Kulishova, L. M., Zharkov, D. O. & Lavrik, O. I., 29 Nov 2023, In: PLoS ONE. 18, 11, 26 p., e0294683.

    Research output: Contribution to journal › Article › peer-review

  29. Catalytically Competent Conformation of the Active Site of Human 8-Oxoguanine-DNA Glycosylase

    Popov, A. V., Yudkina, A. V., Vorobjev, Y. N. & Zharkov, D. O., 17 Feb 2020, In: Biochemistry (Moscow). 85, 2, p. 192-204 13 p.

    Research output: Contribution to journal › Article › peer-review

  30. Chapter 8: Substrate specificities of DNA glycosylases in vitro and in vivo: Substrate specificities of DNA glycosylases in vitro and in vivo

    Ендуткин, А. В. & Жарков, Д. О., 2020, DNA Damage, DNA Repair and Disease: Volume 1. Dizdaroglu, M. & Lloyd, R. S. (eds.). London: Royal Society of Chemistry, Vol. 1. p. 175-203 29 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  31. Characterization of biochemical properties of an apurinic/apyrimidinic endonuclease from Helicobacter pylori

    Turgimbayeva, A., Abeldenov, S., Zharkov, D. O., Ishchenko, A. A., Ramankulov, Y., Saparbaev, M. & Khassenov, B., 15 Aug 2018, In: PLoS ONE. 13, 8, p. e0202232 26 p., e0202232.

    Research output: Contribution to journal › Article › peer-review

  32. Characterization of primary normal and malignant breast cancer cell and their response to chemotherapy and immunostimulatory agents

    Nushtaeva, A. A., Stepanov, G. A., Semenov, D. V., Juravlev, E. S., Balahonova, E. A., Gerasimov, A. V., Sidorov, S. V., Savelyev, E. I., Kuligina, E. V., Richter, V. A. & Koval, O. A., 9 Jul 2018, In: BMC Cancer. 18, 1, p. 728 11 p., 728.

    Research output: Contribution to journal › Article › peer-review

  33. Characterization of Recombinant Endonuclease IV from Mycobacterium tuberculosis

    Dymova, M. A., Endutkin, A. V., Polunovsky, V. V., Zakabunin, A. I., Khrapov, E. A., Torgasheva, N. A., Yudkina, A. V., Mechetin, G. V., Filipenko, M. L. & Zharkov, D. O., Mar 2021, In: Molecular Biology. 55, 2, p. 225-233 9 p.

    Research output: Contribution to journal › Article › peer-review

  34. Cloning and characterization of the major AP endonuclease from Staphylococcus aureus

    Turgimbayeva, A., Zein, U., Zharkov, D. O., Ramankulov, Y., Saparbaev, M. & Abeldenov, S., Nov 2022, In: DNA Repair. 119, 10 p., 103390.

    Research output: Contribution to journal › Article › peer-review

  35. Conformational Dynamics of Damage Processing by Human DNA Glycosylase NEIL1

    Kladova, O. A., Grin, I. R., Fedorova, O. S., Kuznetsov, N. A. & Zharkov, D. O., 15 Mar 2019, In: Journal of Molecular Biology. 431, 6, p. 1098-1112 15 p.

    Research output: Contribution to journal › Article › peer-review

  36. Correlated target search by uracil-DNA glycosylase in the presence of bulky adducts and DNA-binding ligands

    Mechetin, G. V., Dyatlova, E. A., Sinyakov, A. N., Ryabinin, V. A., Vorobjev, P. E. & Zharkov, D. O., 1 Jan 2017, In: Russian Journal of Bioorganic Chemistry. 43, 1, p. 23-28 6 p.

    Research output: Contribution to journal › Article › peer-review

  37. Correlated Target Search by Vaccinia Virus Uracil-DNA Glycosylase, a DNA Repair Enzyme and a Processivity Factor of Viral Replication Machinery

    Diatlova, E. A., Mechetin, G. V., Yudkina, A. V., Zharkov, V. D., Torgasheva, N. A., Endutkin, A. V., Shulenina, O. V., Konevega, A. L., Gileva, I. P., Shchelkunov, S. N. & Zharkov, D. O., 23 May 2023, In: International Journal of Molecular Sciences. 24, 11, 9113.

    Research output: Contribution to journal › Article › peer-review

  38. Critical Sites of DNA Backbone Integrity for Damaged Base Removal by Formamidopyrimidine-DNA Glycosylase

    Endutkin, A. V. & Zharkov, D. O., 18 Jun 2019, In: Biochemistry. 58, 24, p. 2740-2749 10 p.

    Research output: Contribution to journal › Article › peer-review

  39. Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., Feb 2022, In: Data in Brief. 40, 107760.

    Research output: Contribution to journal › Article › peer-review

  40. Development of constructs based on the CRISPR/Cas9 system for studying the role of non-canonical mismatch repair in editing the epigenome

    Kakhkharova, Z. I., Khantakova, D. V., Petrova, D. V. & Grin, I. R., Jul 2019, In: FEBS Open Bio. 9, p. 399-399 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  41. Dihydroartemisinin counteracts fibrotic portal hypertension via farnesoid X receptor-dependent inhibition of hepatic stellate cell contraction

    Endutkin, A., Popov, A., Yudkina, A., Makasheva, K., Afonnikov, D., Simmerling, C. & Zharkov, D., 1 Jan 2017, In: FEBS Journal. 284, 1, p. 114-133 20 p.

    Research output: Contribution to journal › Article › peer-review

  42. Displacement of Slow-Turnover DNA Glycosylases by Molecular Traffic on DNA

    Yudkina, A. V., Endutkin, A. V., Diatlova, E. A., Moor, N. A., Vokhtantsev, I. P., Grin, I. R. & Zharkov, D. O., Aug 2020, In: Genes. 11, 8, p. 1-21 21 p., 866.

    Research output: Contribution to journal › Article › peer-review

  43. Distinct Mechanisms of Target Search by Endonuclease VIII-like DNA Glycosylases

    Diatlova, E. A., Mechetin, G. V. & Zharkov, D. O., Oct 2022, In: Cells. 11, 20, 3192.

    Research output: Contribution to journal › Article › peer-review

  44. DNA Damage Response and Repair in Boron Neutron Capture Therapy

    Mechetin, G. V. & Zharkov, D. O., 2 Jan 2023, In: Genes. 14, 1, 127.

    Research output: Contribution to journal › Review article › peer-review

  45. DNA Deformation-Coupled Recognition of 8-Oxoguanine: Conformational Kinetic Gating in Human DNA Glycosylase

    Li, H., Endutkin, A. V., Bergonzo, C., Fu, L., Grollman, A., Zharkov, D. O. & Simmerling, C., 22 Feb 2017, In: Journal of the American Chemical Society. 139, 7, p. 2682-2692 11 p.

    Research output: Contribution to journal › Article › peer-review

  46. DNA glycosylases for 8-oxoguanine repair in Staphylococcus aureus

    Endutkin, A. V., Panferova, E. P., Barmatov, A. E. & Zharkov, D. O., Sept 2021, In: DNA Repair. 105, p. 103160 103160.

    Research output: Contribution to journal › Article › peer-review

  47. DNA lesions against genome editing: how Cas9 cleaves the substrates with damages

    Vokhtantsev, I. P., Endutkin, A. V., Kulishova, L. M. & Zharkov, O., Jul 2019, In: FEBS Open Bio. 9, p. 397-397 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  48. DNA repair in transcription intermediates by helix-two-turn-helix family DNA glycosylases

    Makasheva, K. & Zharkov, D., Sept 2017, In: FEBS Journal. 284, p. 114-114 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  49. Dynamic recognition in protein-DNA complexes

    Simmerling, C., Grollman, A. & Zharkov, D., 20 Aug 2017, In: Abstracts of papers of the american chemical society. 254, 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  50. Dynamics and Conformational Changes in Human NEIL2 DNA Glycosylase Analyzed by Hydrogen/Deuterium Exchange Mass Spectrometry

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., 30 Jan 2022, In: Journal of Molecular Biology. 434, 2, 167334.

    Research output: Contribution to journal › Article › peer-review

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