Mutational signatures and mutable motifs in cancer genomes

Rogozin, I. B., Pavlov, Y. I., Goncearenco, A., De, S., Lada, A. G., Poliakov, E., Panchenko, A. R. & Cooper, D. N., 30 May 2017, In: Briefings in Bioinformatics. 19, 6, p. 1085-1101 17 p.

Research output: Contribution to journal › Article › peer-review

New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes

Ershov, N. I., Mordvinov, V. A., Prokhortchouk, E. B., Pakharukova, M. Y., Gunbin, K. V., Ustyantsev, K., Genaev, M. A., Blinov, A. G., Mazur, A., Boulygina, E., Tsygankova, S., Khrameeva, E., Chekanov, N., Fan, G., Xiao, A., Zhang, H., Xu, X., Yang, H., Solovyev, V., Lee, S. M. Y., & 3 othersLiu, X., Afonnikov, D. A. & Skryabin, K. G., 22 May 2019, In: BMC Genomics. 20, 1, p. 399 22 p., 399.

Research output: Contribution to journal › Article › peer-review

Nucleosome positioning around transcription start site correlates with gene expression only for active chromatin state in drosophila interphase chromosomes

Levitsky, V. G., Zykova, T. Y., Moshkin, Y. M. & Zhimulev, I. F., 1 Dec 2020, In: International Journal of Molecular Sciences. 21, 23, p. 1-10 10 p., 9282.

Research output: Contribution to journal › Article › peer-review

Online resources on gene networks containing human and animal data

Ignatieva, E. V., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 8, p. 895-902 8 p.

Research output: Contribution to journal › Article › peer-review

On-target CRISPR/CAS9 activity can cause undesigned large deletion in mouse zygotes

Korablev, A., Lukyanchikova, V., Serova, I. & Battulin, N., 20 May 2020, In: International Journal of Molecular Sciences. 21, 10, 14 p., 3604.

Research output: Contribution to journal › Article › peer-review

Orthoscape: A cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles

Mustafin, Z. S., Lashin, S. A., Matushkin, Y. G., Gunbin, K. V. & Afonnikov, D. A., 27 Jan 2017, In: Bioinformatics. 18, Suppl 1, p. 1-9 9 p., 28.

Research output: Contribution to journal › Article › peer-review

Phylostratigraphic analysis shows the earliest origination of the abiotic stress associated genes in a. Thaliana

Mustafin, Z. S., Zamyatin, V. I., Konstantinov, D. K., Doroshkov, A. V., Lashin, S. A. & Afonnikov, D. A., 22 Nov 2019, In: Genes. 10, 12, 27 p., 963.

Research output: Contribution to journal › Article › peer-review

PlantLayout pipeline to model tissue patterning

Savina, M. S. & Mironova, V. V., 1 Jan 2020, In: Вавиловский журнал генетики и селекции. 24, 1, p. 102-107 6 p.

Research output: Contribution to journal › Article › peer-review

Pluripotency gene network dynamics: System views from parametric analysis

Akberdin, I. R., Omelyanchuk, N. A., Fadeev, S. I., Leskova, N. E., Oschepkova, E. A., Kazantsev, F. V., Matushkin, Y. G., Afonnikov, D. A. & Kolchanov, N. A., 29 Mar 2018, In: PLoS ONE. 13, 3, p. e0194464 24 p., 0194464.

Research output: Contribution to journal › Article › peer-review

Prioritization of biological processes based on the reconstruction and analysis of associative gene networks describing the response of plants to adverse environmental factors

Demenkov, P. S., Oshchepkova, E. A., Ivanisenko, T. V. & Ivanisenko, V. A., Sept 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 5, p. 580-592 13 p., 13.

Research output: Contribution to journal › Article › peer-review