New genetic data on the Pleistocene Ovodov horses of Siberia

Kusliy, M. A., Malikov, D. G., Klementiev, A. M., Samarina, S. A., Modina, S. A., Tishakova, K. V., Lemskaya, N. A., Serdyukova, N. A., Budenchuk, E. V., Yakovlev, A. V., Cheklyuev, P. A., Yurlova, A. A., Tomarovsky, A. A., Totikov, A. A., Nushtaev, Y. Y., Popova, K. O., Pavlov, I. S., Pavlova, N. I., Protopopov, A. V., Graphodatsky, A. S., & 2 othersVorobieva, N. V. & Molodtseva, A. S., Jan 2026, In: Quaternary Science Reviews. 372, 13 p., 109696.

Research output: Contribution to journal › Article › peer-review

Description of the Seminiferous Epithelium Cycle Stages in the Zebra Finch Taeniopygia guttata

Bikchurina, T., Rubtsova, D., Odnoprienko, D., Borodin, P., Torgasheva, A. & Malinovskaya, L., 27 Nov 2025, In: Animals. 15, 23, 11 p., 3427.

Research output: Contribution to journal › Article › peer-review

Germline-Restricted Chromosome (GRC) in Diploid and Polyploid Spermatocytes of the Eurasian Bullfinch, Pyrrhula pyrrhula (Fringillidae, Passeriformes, Aves)

Grishko, E., Malinovskaya, L., Tishakova, K. & Borodin, P., 24 Nov 2025, In: Animals. 15, 23, 11 p., 3394.

Research output: Contribution to journal › Article › peer-review

Integrative Study of the Life Cycle in the Marine Protist Thraustochytrium aureum ssp. strugatskii

Doroshkov, A. V., Naumenko, L. G., Iukhtanov, D. A., Morozova, K. N., Kiseleva, E. V., Menzorov, A. G. & Zubairova, U. S., 22 Nov 2025, In: International Journal of Molecular Sciences. 26, 23, 26 p., 11302.

Research output: Contribution to journal › Article › peer-review

Assessing the Functional Significance of Novel and Rare Variants of the SLC26A4 Gene Found in Patients with Hearing Loss by Minigene Assay

Danilchenko, V. Y., Panina, E. A., Zytzar, M. V., Orishchenko, K. E. & Posukh, O. L., 4 Nov 2025, In: International Journal of Molecular Sciences. 26, 21, 16 p., 10732.

Research output: Contribution to journal › Article › peer-review

Chromatin landscape, transcriptomic and ChIP-seq profiling of Anopheles stephensi MSQ43 cell line

Lukyanchikova, V., Nuriddinov, M., Khabarova, A., Gridina, M., Popov, A., Belokopytova, P., Sharakhov, I. V. & Fishman, V., 26 Sept 2025, In: Scientific Data. 12, 1, p. 1566

Research output: Contribution to journal › Article › peer-review

Direction and modality of transcription changes caused by TAD boundary disruption in Slc29a3/Unc5b locus depends on tissue-specific epigenetic context

Salnikov, P., Belokopytova, P., Yan, A., Viesná, E., Korablev, A., Serova, I., Lukyanchikova, V., Stepanchuk, Y., Torgunakov, N., Tikhomirov, S. & Fishman, V., 12 Aug 2025, In: Epigenetics & chromatin. 18, 1, 55.

Research output: Contribution to journal › Article › peer-review

Identification of Key Differentially Expressed Genes in Arabidopsis thaliana Under Short- and Long-Term High Light Stress

Bobrovskikh, A. V., Zubairova, U. S. & Doroshkov, A. V., 12 Aug 2025, In: International Journal of Molecular Sciences. 26, 16, 36 p., 7790.

Research output: Contribution to journal › Article › peer-review

Analysis by Minigene Assay of the Splicing Effect of a Novel Variant c.1545T>G in the SLC26A4 Gene Associated with Hearing Loss

Panina, E. A., Danilchenko, V. Y., Zytsar, M. V., Orishchenko, K. E. & Posukh, O. L., 10 Jun 2025, In: Russian Journal of Genetics. 61, 5, p. 602-607 6 p.

Research output: Contribution to journal › Article › peer-review

Charm is a flexible pipeline to simulate chromosomal rearrangements on Hi-C-like data

Nuriddinov, M., Belokopytova, P. & Fishman, V., Jun 2025, In: NAR Genomics and Bioinformatics. 7, 2, p. lqaf081 10 p., lqaf081.

Research output: Contribution to journal › Article › peer-review

От цитогенетики к протеогеномике: новые горизонты в исследовании анеуплодий

Zadesenets, K. S. & Rubtsov, N. B., Jun 2025, In: Vavilovskii Zhurnal Genetiki i Selektsii. 29, 3, p. 335-348 14 p.

Research output: Contribution to journal › Article › peer-review

Combining chromosome conformation capture and exome sequencing for simultaneous detection of structural and single-nucleotide variants

Gridina, M., Lagunov, T., Belokopytova, P., Torgunakov, N., Nuriddinov, M., Nurislamov, A., Nazarenko, L. P., Kashevarova, A. A., Lopatkina, M. E., Vasilyev, S., Zuev, A., Belyaeva, E. O., Salyukova, O. A., Cheremnykh, A. D., Sukhanova, N. N., Minzhenkova, M. E., Markova, Z. G., Demina, N. A., Stepanchuk, Y., Khabarova, A., & 22 othersYan, A., Valeev, E., Koksharova, G., Grigor’eva, E. V., Kokh, N., Lukjanova, T., Maximova, Y., Musatova, E., Shabanova, E., Kechin, A., Khrapov, E., Boyarskih, U., Ryzhkova, O., Suntsova, M., Matrosova, A., Karoli, M., Manakhov, A., Filipenko, M., Rogaev, E., Shilova, N. V., Lebedev, I. N. & Fishman, V., 7 May 2025, In: Genome Medicine. 17, 1, p. 47 47.

Research output: Contribution to journal › Article › peer-review

Some Peculiarities of MLH1 Foci Distribution in Common Degu (Octodon degus, Rodentia: Octodontidae) Chromosomes: Presence in Pericentromeric Regions and Absence in XY

Bikchurina, T., Grishko, E., Odnoprienko, D. & Borodin, P., 16 Apr 2025, In: Cytogenetic and Genome Research. 165, 3-5, p. 128-139 12 p.

Research output: Contribution to journal › Article › peer-review

Generation of iTAF1-36-H8.1 and iTAF1-36-H8.2 Human-Induced Pluripotent Stem Cell Lines with HAR Deletion in the CNTN6 Gene by CRISPR/Cas9 Genome-Editing Technology

Chvileva, A. S., Yunusova, A. M., Pristyazhnyuk, I. E., Smirnov, A. V., Ryzhkova, A. S., Belokopytova, P. S. & Shnaider, T. A., 17 Mar 2025, In: Russian Journal of Developmental Biology. 55, 5, p. 296-306 11 p.

Research output: Contribution to journal › Article › peer-review

Studying concatenation of the Cas9-cleaved transgenes using barcodes

Smirnov, A. V., Korablev, A. N., Serova, I. A., Yunusova, A. M., Muravyova, A. A., Valeev, E. S. & Battulin, N. R., Feb 2025, In: Vavilovskii Zhurnal Genetiki i Selektsii. 29, 1, p. 26-34 9 p., 3.

Research output: Contribution to journal › Article › peer-review

Сравнительный анализ гаплотипов, несущих патогенные варианты C.1545T>G, C.2027T>A и C.919-2A>G гена SLC26A4, у пациентов с потерей слуха из Республики Тыва (Южная Сибирь)

Danilchenko, V. Y., Zytsar, M. V., Panina, E. A., Orishchenko, K. E. & Posukh, O. L., Feb 2025, In: Vavilovskii Zhurnal Genetiki i Selektsii. 29, 1, p. 144-152 9 p.

Research output: Contribution to journal › Article › peer-review

Ultrastructural organization of the liver of rat pups in early postnatal ontogenesis when pregnant and lactating rats are kept on a low-protein diet

Pershina, E. G., Morozova, K. N. & Bgatova, N. P., 2 Jan 2025, In: Ultrastructural Pathology. 49, 1, p. 93-107 15 p.

Research output: Contribution to journal › Article › peer-review

Comparative analysis of haplotypes carrying pathogenic variants c.1545T>G, c.2027T>A and c.919-2A>G of the SLC26A4 gene in patients with hearing loss from the Tyva Republic (Southern Siberia)

Данильченко, В. Ю., Зыцарь, М. В., Панина, Е. А., Орищенко, К. Е. & Посух, О. Л., 2025, In: Вавиловский журнал генетики и селекции.

Research output: Contribution to journal › Article › peer-review

Knockdown-Induced Fasting Phenotypes in Flatworms: Insights into Underlying Mechanisms of Feeding Behaviour

Бирюков, М. Ю. & Задесенец, К. С., 2025, In: International Journal of Molecular Sciences.

Research output: Contribution to journal › Article › peer-review

Анализ влияния на сплайсинг вариантов гена SLC26A4, выявленных у пациентов с потерей слуха из Республик Тыва и Алтай (Южная Сибирь)

Данильченко, В. Ю., Панина, Е. А., Зыцарь, М. В., Орищенко, К. Е. & Посух, О. Л., 2025, In: Медицинская генетика. 24, 4

Research output: Contribution to journal › Article › peer-review

Создание и характеристика унифицированной модельной системы in vitro для сравнительного анализа вариантов гена GJB2, ассоциированных с потерей слуха

Маслова, Е. А., Орищенко, К. Е. & Посух, О. Л., 2025, In: Медицинская генетика.

Research output: Contribution to journal › Article › peer-review

Auxin Triggers AHR Pathway Activation in the Auxin-Inducible Degron System in Mammalian Cells

Yunusova, A., Zadorozhnyi, D. & Battulin, N., Dec 2024, In: Biochemistry (Moscow). 89, 12, p. 2214-2226 13 p., 10.

Research output: Contribution to journal › Article › peer-review

Structural variants in the Epb41l4a locus: TAD disruption and Nrep gene misregulation as hypothetical drivers of neurodevelopmental outcomes

Salnikov, P., Korablev, A., Serova, I., Belokopytova, P., Yan, A., Stepanchuk, Y., Tikhomirov, S. & Fishman, V., Dec 2024, In: Scientific Reports. 14, 1, 8 p., 5288.

Research output: Contribution to journal › Article › peer-review

TAD border deletion at the Kit locus causes tissue-specific ectopic activation of a neighboring gene

Kabirova, E., Ryzhkova, A., Lukyanchikova, V., Khabarova, A., Korablev, A., Shnaider, T., Nuriddinov, M., Belokopytova, P., Smirnov, A., Khotskin, N. V., Kontsevaya, G., Serova, I. & Battulin, N., Dec 2024, In: Nature Communications. 15, 1, 16 p., 4521.

Research output: Contribution to journal › Article › peer-review

The chromosome-scale genome assembly for the West Nile vector Culex quinquefasciatus uncovers patterns of genome evolution in mosquitoes

Ryazansky, S. S., Chen, C., Potters, M., Naumenko, A. N., Lukyanchikova, V., Masri, R. A., Brusentsov, I. I., Karagodin, D. A., Yurchenko, A. A., Dos Anjos, V. L., Haba, Y., Rose, N. H., Hoffman, J., Guo, R., Menna, T., Kelley, M., Ferrill, E., Schultz, K. E., Qi, Y., Sharma, A., & 12 othersDeschamps, S., Llaca, V., Mao, C., Murphy, T. D., Baricheva, E. M., Emrich, S., Fritz, M. L., Benoit, J. B., Sharakhov, I. V., McBride, C. S., Tu, Z. & Sharakhova, M. V., Dec 2024, In: BMC Biology. 22, 1, 27 p., 16.

Research output: Contribution to journal › Article › peer-review

Loop Extrusion Machinery Impairments in Models and Disease

Ryzhkova, A., Maltseva, E., Battulin, N. & Kabirova, E., 17 Nov 2024, In: Cells. 13, 22, 1896.

Research output: Contribution to journal › Review article › peer-review

Characterizing a lethal CAG-ACE2 transgenic mouse model for SARS-CoV-2 infection using Cas9-enhanced nanopore sequencing

Smirnov, A., Nurislamov, A., Koncevaya, G., Serova, I., Kabirova, E., Chuyko, E., Maltceva, E., Savoskin, M., Zadorozhny, D., Svyatchenko, V. A., Protopopova, E. V., Taranov, O. S., Legostaev, S. S., Loktev, V. B., Serov, O. & Battulin, N., Oct 2024, In: Transgenic Research. 33, 5, p. 453-466 14 p.

Research output: Contribution to journal › Article › peer-review

Crosstalk between BER and NHEJ in XRCC4-Deficient Cells Depending on hTERT Overexpression

Sergeeva, S. V., Loshchenova, P. S., Oshchepkov, D. Y. & Orishchenko, K. E., 27 Sept 2024, In: International Journal of Molecular Sciences. 25, 19, 10405.

Research output: Contribution to journal › Article › peer-review

Generation and analysis of mouse embryonic stem cells with knockout of the Mcph1 (microcephalin) gene

Yunusova, A. M., Smirnov, A. V., Shnaider, T. A., Pristyazhnuk, I. E., Korableva, S. Y. & Battulin, N. R., 23 Sept 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 5, p. 487-494 8 p.

Research output: Contribution to journal › Article › peer-review

A potent, broadly neutralizing human monoclonal antibody that efficiently protects hACE2-transgenic mice from infection with the Wuhan, BA.5, and XBB.1.5 SARS-CoV-2 variants

Guselnikov, S. V., Baranov, K. O., Kulemzin, S. V., Belovezhets, T. N., Chikaev, A. N., Murasheva, S. V., Volkova, O. Y., Mechetina, L. V., Najakshin, A. M., Chikaev, N. A., Solodkov, P. P., Sergeeva, M. V., Smirnov, A. V., Serova, I. A., Serov, O. L., Markhaev, A. G., Kononova, Y. V., Alekseev, A. Y., Gulyaeva, M. A., Danilenko, D. M., & 3 othersBattulin, N. R., Shestopalov, A. M. & Taranin, A. V., 9 Aug 2024, In: Frontiers in Immunology. 15, 8 p., 1442160.

Research output: Contribution to journal › Article › peer-review

A HGF Mutation in the Familial Case of Primary Lymphedema: A Report

Koksharova, G., Kokh, N., Gridina, M., Khapaev, R., Nimaev, V. & Fishman, V., May 2024, In: International Journal of Molecular Sciences. 25, 10, 5464.

Research output: Contribution to journal › Article › peer-review

Assessing cell lines with inducible depletion of cohesin and condensins components through analysis of metaphase chromosome morphology

Yunusova, A. M., Smirnov, A. V., Pristyazhnuk, I. E., Shnaider, T. A., Maltseva, E. K., Afonnikova, S. D., Gusev, O. A. & Battulin, N. R., Apr 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 2, p. 138-147 10 p., 2.

Research output: Contribution to journal › Article › peer-review

Modification of the Hi-C Technology for Molecular Genetic Analysis of Formalin-Fixed Paraffin-Embedded Sections of Tumor Tissues

Gridina, M. M., Stepanchuk, Y. K., Nurridinov, M. A., Lagunov, T. A., Torgunakov, N. Y., Shadsky, A. A., Ryabova, A. I., Vasiliev, N. V., Vtorushin, S. V., Gerashchenko, T. S., Denisov, E. V., Travin, M. A., Korolev, M. A. & Fishman, V. S., Apr 2024, In: Biochemistry (Moscow). 89, 4, p. 637-652 16 p.

Research output: Contribution to journal › Article › peer-review

Towards Development of the 4C-Based Method Detecting Interactions of Plasmid DNA with Host Genome

Yan, A. P., Salnikov, P. A., Gridina, M. M., Belokopytova, P. S. & Fishman, V. S., Apr 2024, In: Biochemistry (Moscow). 89, 4, p. 653-662 10 p.

Research output: Contribution to journal › Article › peer-review

A case report of Pallister-Killian syndrome with an unusual mosaic supernumerary marker chromosome 12 with interstitial 12p13.1-p12.1 duplication

Karamysheva, T. V., Lebedev, I. N., Minaycheva, L. I., Nazarenko, L. P., Kashevarova, A. A., Fedotov, D. A., Skryabin, N. A., Lopatkina, M. E., Cheremnykh, A. D., Fonova, E. A., Nikitina, T. V., Sazhenova, E. A., Skleimova, M. M., Kolesnikov, N. A., Drozdov, G. V., Yakovleva, Y. S., Seitova, G. N., Orishchenko, K. E. & Rubtsov, N. B., Mar 2024, In: Frontiers in Genetics. 15, 1331066.

Research output: Contribution to journal › Article › peer-review

Knockout of the Tnfa Gene Decreases Influenza Virus-Induced Histological Reactions in Laboratory Mice

Savenkova, D. A., Gudymo, A. S., Korablev, A. N., Taranov, O. S., Bazovkina, D. V., Danilchenko, N. V., Perfilyeva, O. N., Ivleva, E. K., Moiseeva, A. A., Bulanovich, Y. A., Roshchina, E. V., Serova, I. A., Battulin, N. R., Kulikova, E. A. & Yudkin, D. V., Jan 2024, In: International Journal of Molecular Sciences. 25, 2, 1156.

Research output: Contribution to journal › Article › peer-review

Differential gene expression in degenerative lumbar discs from the Russian disc degeneration study (RuDDS) biobank

Тяпкин, А. В., Иванов, А. А., Леонова, О. Н., Krutko, A. V., Peleganchuk, A. V., Фишман, В. С., Елгаева, Е. Е. & Цепилов, Я. А., 2024, In: European journal of human genetics. 32, S2, p. 996-997 2 p., EP06.052.

Research output: Contribution to journal › Article › peer-review

New insights into the chromosomes of stoneflies: I. Karyotype, C-banding and localization of ribosomal and telomeric DNA markers in Skwala compacta (McLachlan, 1872) (Polyneoptera, Plecoptera, Perlodidae) from Siberia

Bugrov, A., Karamysheva, T. & Buleu, O., 2024, In: Comparative Cytogenetics. 18, p. 15-26 12 p.

Research output: Contribution to journal › Article › peer-review

The distribution patterns of the two-coloured bush-cricket Bicolorana bicolor (Philippi, 1830) (Orthoptera: Tettigoniidae) across the Asian part of its range

Baturina, N. S., Molodtsov, V. V., Shamychkova, A. A., Storozhenko, S. Y. & Sergeev, M. G., 2024, In: Russian Entomological Journal. 33, 2, p. 153-162 10 p.

Research output: Contribution to journal › Article › peer-review

Закономерности эколого-географического распределения дальневосточной бескрылой кобылки Prumna primnoa (Motschulsky, 1846) (Orthoptera: Acrididae: Melanoplinae)

Sergeev, M. G., Storozhenko, S. Y., Molodtsov, V. V., Zharkov, V. D., Pashkova, A. I. & Shamychkova, A. A., 2024, In: Kavkazskij Entomologiceskij Bulleten. 20, 2, p. 291-298 8 p.

Research output: Contribution to journal › Article › peer-review

Разработка метода детекции пространственных контактов плазмидной ДНК с геномом в клетках человека

Ян, А. П., Сальников, П. А., Гридина, М. М., Белокопытова, П. С. & Фишман, В. С., 2024, In: Биохимия. 89, 4, p. 612-622 11 p.

Research output: Contribution to journal › Article › peer-review

Expanding the list of sequence-agnostic enzymes for chromatin conformation capture assays with S1 nuclease

Maria, G., Andrey, P., Artem, S., Nikita, T., Andrey, K., Evgeny, K., Oxana, R., Maxim, F. & Veniamin, F., 11 Dec 2023, In: Epigenetics & chromatin. 16, 1, 13 p., 48.

Research output: Contribution to journal › Article › peer-review

Ultrastructural Abnormalities in Induced Pluripotent Stem Cell-Derived Neural Stem Cells and Neurons of Two Cohen Syndrome Patients

Shnaider, T. A., Khabarova, A. A., Morozova, K. N., Yunusova, A. M., Yakovleva, S. A., Chvileva, A. S., Wolf, E. R., Kiseleva, E. V., Grigor'eva, E. V., Voinova, V. Y., Lagarkova, M. A., Pomerantseva, E. A., Musatova, E. V., Smirnov, A. V., Smirnova, A. V., Stoklitskaya, D. S., Arefieva, T. I., Larina, D. A., Nikitina, T. V. & Pristyazhnyuk, I. E., 25 Nov 2023, In: Cells. 12, 23, 2702.

Research output: Contribution to journal › Article › peer-review

Functional Consequences of Pathogenic Variants of the GJB2 Gene (Cx26) Localized in Different Cx26 Domains

Posukh, O. L., Maslova, E. A., Danilchenko, V. Y., Zytsar, M. V. & Orishchenko, K. E., 13 Oct 2023, In: Biomolecules. 13, 10, 1521.

Research output: Contribution to journal › Review article › peer-review

Robertsonian fusion triggers recombination suppression on sex chromosomes in Coleonyx geckos

Lisachov, A., Tishakova, K., Romanenko, S., Lisachova, L., Davletshina, G., Prokopov, D., Kratochvíl, L., O Brien, P., Ferguson-Smith, M., Borodin, P. & Trifonov, V., 19 Sept 2023, In: Scientific Reports. 13, 1, 10 p., 15502.

Research output: Contribution to journal › Article › peer-review