TY - JOUR

T1 - Genome-Wide Analysis of Ca2+-ATPases and their Salt Stress Responses in Sugar Beet

AU - Liu, Shuting

AU - Chen, Sixue

AU - Grin, Inga R.

AU - DuanMu, Huizi

AU - Li, Haiying

N1 - International Cooperation and Exchange of the National Science Foundation of China Project, 32261133530,Haiying Li, National Science Foundation of China Project, 32072122,Haiying Li, Russian Science Foundation, 23-44-00050, Inga R. Grin.

PY - 2024

Y1 - 2024

N2 - Salt stress inhibits seed germination, plant growth, development and productivity. Ca2+-ATPases play a key role in plant response to environmental stresses. Sugar beet is an important cash crop and one of the main sugar crops in China. However, there are few reports on the study of Ca2+-ATPase gene family in sugar beet. In this study, we analyzed the sugar beet Ca2+-ATPase gene family and the functions of genes in response to salt stress. A total of 21 Ca2+-ATPase genes were identified in the genome. Their physical and chemical properties, chromosome localization, and subcellular localization were predicted by bioinformatics analysis. Additionally, their phylogenetic relationships, structural characteristics, cis-acting elements, and expression patterns in different tissues of sugar beet under salt stress were analyzed. Protein interaction networking indicates that Ca2+-ATPase may play a role in flavonoid biosynthesis and ABA signal transduction. The results help to advance our understanding of the Ca2+-ATPase gene family, providing a scientific base for elucidating the functions of Ca2+-ATPase genes in plant stress responses.

AB - Salt stress inhibits seed germination, plant growth, development and productivity. Ca2+-ATPases play a key role in plant response to environmental stresses. Sugar beet is an important cash crop and one of the main sugar crops in China. However, there are few reports on the study of Ca2+-ATPase gene family in sugar beet. In this study, we analyzed the sugar beet Ca2+-ATPase gene family and the functions of genes in response to salt stress. A total of 21 Ca2+-ATPase genes were identified in the genome. Their physical and chemical properties, chromosome localization, and subcellular localization were predicted by bioinformatics analysis. Additionally, their phylogenetic relationships, structural characteristics, cis-acting elements, and expression patterns in different tissues of sugar beet under salt stress were analyzed. Protein interaction networking indicates that Ca2+-ATPase may play a role in flavonoid biosynthesis and ABA signal transduction. The results help to advance our understanding of the Ca2+-ATPase gene family, providing a scientific base for elucidating the functions of Ca2+-ATPase genes in plant stress responses.

KW - Beta vulgarisL

KW - Bioinformatics

KW - Ca2+-ATPase gene family

KW - Gene expression analysis

KW - Salt stress

UR - https://www.scopus.com/record/display.uri?eid=2-s2.0-85211961988&origin=inward&txGid=6e6c16f632696a0fcdddd963658428e5

UR - https://www.mendeley.com/catalogue/aaa4f82b-4ae9-3ba0-83ac-9beb6be392a2/

U2 - 10.1007/s12355-024-01518-6

DO - 10.1007/s12355-024-01518-6

M3 - Article

JO - Sugar Tech

JF - Sugar Tech

SN - 0974-0740

M1 - 153545

ER -