Standard

The evolutionary and phylogeographic history of woolly mammoths : A comprehensive mitogenomic analysis. / Chang, Dan; Knapp, Michael; Enk, Jacob et al.

In: Scientific Reports, Vol. 7, 44585, 22.03.2017.

Research output: Contribution to journal › Article › peer-review

Harvard

Chang, D, Knapp, M, Enk, J, Lippold, S, Kircher, M, Lister, A, Macphee, RDE, Widga, C, Czechowski, P, Sommer, R, Hodges, E, Stümpel, N, Barnes, I, Dalén, L, Derevianko, A, Germonpré, M, Hillebrand-Voiculescu, A, Constantin, S, Kuznetsova, T, Mol, D, Rathgeber, T, Rosendahl, W, Tikhonov, AN, Willerslev, E, Hannon, G, Lalueza-Fox, C, Joger, U, Poinar, H, Hofreiter, M & Shapiro, B 2017, 'The evolutionary and phylogeographic history of woolly mammoths: A comprehensive mitogenomic analysis', Scientific Reports, vol. 7, 44585. https://doi.org/10.1038/srep44585

APA

Chang, D., Knapp, M., Enk, J., Lippold, S., Kircher, M., Lister, A., Macphee, R. D. E., Widga, C., Czechowski, P., Sommer, R., Hodges, E., Stümpel, N., Barnes, I., Dalén, L., Derevianko, A., Germonpré, M., Hillebrand-Voiculescu, A., Constantin, S., Kuznetsova, T., ... Shapiro, B. (2017). The evolutionary and phylogeographic history of woolly mammoths: A comprehensive mitogenomic analysis. Scientific Reports, 7, [44585]. https://doi.org/10.1038/srep44585

Vancouver

Chang D, Knapp M, Enk J, Lippold S, Kircher M, Lister A et al. The evolutionary and phylogeographic history of woolly mammoths: A comprehensive mitogenomic analysis. Scientific Reports. 2017 Mar 22;7:44585. doi: 10.1038/srep44585

Author

Chang, Dan ; Knapp, Michael ; Enk, Jacob et al. / The evolutionary and phylogeographic history of woolly mammoths : A comprehensive mitogenomic analysis. In: Scientific Reports. 2017 ; Vol. 7.

BibTeX

@article{6480959442cc48a898400f795a9a740f,
title = "The evolutionary and phylogeographic history of woolly mammoths: A comprehensive mitogenomic analysis",
abstract = "Near the end of the Pleistocene epoch, populations of the woolly mammoth (Mammuthus primigenius) were distributed across parts of three continents, from western Europe and northern Asia through Beringia to the Atlantic seaboard of North America. Nonetheless, questions about the connectivity and temporal continuity of mammoth populations and species remain unanswered. We use a combination of targeted enrichment and high-throughput sequencing to assemble and interpret a data set of 143 mammoth mitochondrial genomes, sampled from fossils recovered from across their Holarctic range. Our dataset includes 54 previously unpublished mitochondrial genomes and significantly increases the coverage of the Eurasian range of the species. The resulting global phylogeny confirms that the Late Pleistocene mammoth population comprised three distinct mitochondrial lineages that began to diverge ∼1.0-2.0 million years ago (Ma). We also find that mammoth mitochondrial lineages were strongly geographically partitioned throughout the Pleistocene. In combination, our genetic results and the pattern of morphological variation in time and space suggest that male-mediated gene flow, rather than large-scale dispersals, was important in the Pleistocene evolutionary history of mammoths.",
keywords = "Animal Distribution, Animals, Asia, Biological Evolution, DNA, Mitochondrial/genetics, Europe, Extinction, Biological, Female, Fossils, Gene Flow, Genome, Mitochondrial, Male, Mammoths/classification, North America, Phylogeny, Phylogeography, Sequence Analysis, DNA, MITOCHONDRIAL GENOME, STRATEGIES, HYBRID SELECTION, MULTIPLEX AMPLIFICATION, GENOMIC DISSOCIATION, ANCIENT DNA EXTRACTION, MIGRATION PATTERNS, PHYLOGENETIC ANALYSIS, ALIGNMENT, BIOLOGY",
author = "Dan Chang and Michael Knapp and Jacob Enk and Sebastian Lippold and Martin Kircher and Adrian Lister and Macphee, {Ross D.E.} and Christopher Widga and Paul Czechowski and Robert Sommer and Emily Hodges and Nikolaus St{\"u}mpel and Ian Barnes and Love Dal{\'e}n and Anatoly Derevianko and Mietje Germonpr{\'e} and Alexandra Hillebrand-Voiculescu and Silviu Constantin and Tatyana Kuznetsova and Dick Mol and Thomas Rathgeber and Wilfried Rosendahl and Tikhonov, {Alexey N.} and Eske Willerslev and Greg Hannon and Carles Lalueza-Fox and Ulrich Joger and Hendrik Poinar and Michael Hofreiter and Beth Shapiro",
year = "2017",
month = mar,
day = "22",
doi = "10.1038/srep44585",
language = "English",
volume = "7",
journal = "Scientific Reports",
issn = "2045-2322",
publisher = "Nature Publishing Group",

}

RIS

TY - JOUR

T1 - The evolutionary and phylogeographic history of woolly mammoths

T2 - A comprehensive mitogenomic analysis

AU - Chang, Dan

AU - Knapp, Michael

AU - Enk, Jacob

AU - Lippold, Sebastian

AU - Kircher, Martin

AU - Lister, Adrian

AU - Macphee, Ross D.E.

AU - Widga, Christopher

AU - Czechowski, Paul

AU - Sommer, Robert

AU - Hodges, Emily

AU - Stümpel, Nikolaus

AU - Barnes, Ian

AU - Dalén, Love

AU - Derevianko, Anatoly

AU - Germonpré, Mietje

AU - Hillebrand-Voiculescu, Alexandra

AU - Constantin, Silviu

AU - Kuznetsova, Tatyana

AU - Mol, Dick

AU - Rathgeber, Thomas

AU - Rosendahl, Wilfried

AU - Tikhonov, Alexey N.

AU - Willerslev, Eske

AU - Hannon, Greg

AU - Lalueza-Fox, Carles

AU - Joger, Ulrich

AU - Poinar, Hendrik

AU - Hofreiter, Michael

AU - Shapiro, Beth

PY - 2017/3/22

Y1 - 2017/3/22

N2 - Near the end of the Pleistocene epoch, populations of the woolly mammoth (Mammuthus primigenius) were distributed across parts of three continents, from western Europe and northern Asia through Beringia to the Atlantic seaboard of North America. Nonetheless, questions about the connectivity and temporal continuity of mammoth populations and species remain unanswered. We use a combination of targeted enrichment and high-throughput sequencing to assemble and interpret a data set of 143 mammoth mitochondrial genomes, sampled from fossils recovered from across their Holarctic range. Our dataset includes 54 previously unpublished mitochondrial genomes and significantly increases the coverage of the Eurasian range of the species. The resulting global phylogeny confirms that the Late Pleistocene mammoth population comprised three distinct mitochondrial lineages that began to diverge ∼1.0-2.0 million years ago (Ma). We also find that mammoth mitochondrial lineages were strongly geographically partitioned throughout the Pleistocene. In combination, our genetic results and the pattern of morphological variation in time and space suggest that male-mediated gene flow, rather than large-scale dispersals, was important in the Pleistocene evolutionary history of mammoths.

AB - Near the end of the Pleistocene epoch, populations of the woolly mammoth (Mammuthus primigenius) were distributed across parts of three continents, from western Europe and northern Asia through Beringia to the Atlantic seaboard of North America. Nonetheless, questions about the connectivity and temporal continuity of mammoth populations and species remain unanswered. We use a combination of targeted enrichment and high-throughput sequencing to assemble and interpret a data set of 143 mammoth mitochondrial genomes, sampled from fossils recovered from across their Holarctic range. Our dataset includes 54 previously unpublished mitochondrial genomes and significantly increases the coverage of the Eurasian range of the species. The resulting global phylogeny confirms that the Late Pleistocene mammoth population comprised three distinct mitochondrial lineages that began to diverge ∼1.0-2.0 million years ago (Ma). We also find that mammoth mitochondrial lineages were strongly geographically partitioned throughout the Pleistocene. In combination, our genetic results and the pattern of morphological variation in time and space suggest that male-mediated gene flow, rather than large-scale dispersals, was important in the Pleistocene evolutionary history of mammoths.

KW - Animal Distribution

KW - Animals

KW - Asia

KW - Biological Evolution

KW - DNA, Mitochondrial/genetics

KW - Europe

KW - Extinction, Biological

KW - Female

KW - Fossils

KW - Gene Flow

KW - Genome, Mitochondrial

KW - Male

KW - Mammoths/classification

KW - North America

KW - Phylogeny

KW - Phylogeography

KW - Sequence Analysis, DNA

KW - MITOCHONDRIAL GENOME

KW - STRATEGIES

KW - HYBRID SELECTION

KW - MULTIPLEX AMPLIFICATION

KW - GENOMIC DISSOCIATION

KW - ANCIENT DNA EXTRACTION

KW - MIGRATION PATTERNS

KW - PHYLOGENETIC ANALYSIS

KW - ALIGNMENT

KW - BIOLOGY

UR - http://www.scopus.com/inward/record.url?scp=85015996971&partnerID=8YFLogxK

U2 - 10.1038/srep44585

DO - 10.1038/srep44585

M3 - Article

C2 - 28327635

AN - SCOPUS:85015996971

VL - 7

JO - Scientific Reports

JF - Scientific Reports

SN - 2045-2322

M1 - 44585

ER -

ID: 25376704