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Review of heterozygosity visualization approaches in the context of conservation research. / Tomarovsky, Andrey A.; Totikov, Azamat A.; Yakupova, Aliya R. et al.

In: Ecological Genetics, Vol. 21, No. 4, 2023, p. 383-400.

Research output: Contribution to journal › Article › peer-review

Harvard

Tomarovsky, AA, Totikov, AA, Yakupova, AR, Graphodatsky, AS & Kliver, SF 2023, 'Review of heterozygosity visualization approaches in the context of conservation research', Ecological Genetics, vol. 21, no. 4, pp. 383-400. https://doi.org/10.17816/ecogen609552

APA

Tomarovsky, A. A., Totikov, A. A., Yakupova, A. R., Graphodatsky, A. S., & Kliver, S. F. (2023). Review of heterozygosity visualization approaches in the context of conservation research. Ecological Genetics, 21(4), 383-400. https://doi.org/10.17816/ecogen609552

Vancouver

Tomarovsky AA, Totikov AA, Yakupova AR, Graphodatsky AS, Kliver SF. Review of heterozygosity visualization approaches in the context of conservation research. Ecological Genetics. 2023;21(4):383-400. doi: 10.17816/ecogen609552

Author

Tomarovsky, Andrey A. ; Totikov, Azamat A. ; Yakupova, Aliya R. et al. / Review of heterozygosity visualization approaches in the context of conservation research. In: Ecological Genetics. 2023 ; Vol. 21, No. 4. pp. 383-400.

BibTeX

@article{13692e9c05f846c3a841ef5f28bb19bf,
title = "Review of heterozygosity visualization approaches in the context of conservation research",
abstract = "The assessment of heterozygosity level is one of the key metrics in conservation biology, as it contributes to the accurate design of conservation programs for endangered species. With the development of whole-genome sequencing technologies, it is now possible to more accurately estimate heterozygosity not only at the organismal level, but also at the population and species level. Contemporary conservation studies involve the processing of large volumes of whole-genome data, leading to problems of interpretation and necessitates the study of modern visualization methods for clear and correct presentation of results. In this review, we comprehensively examine the main types of visualization of heterozygosity assessments obtained using various approaches. We delve into the theory underlying each visualization method and discuss their characteristics using examples from studies of non-model species with different conservation statuses. The review provides insight into current tools for heterozygosity assessment and subsequent visualization, as well as current trends in this field.",
author = "Tomarovsky, {Andrey A.} and Totikov, {Azamat A.} and Yakupova, {Aliya R.} and Graphodatsky, {Alexander S.} and Kliver, {Sergei F.}",
note = "Funding source. The study has been supported by Russian Science Foundation (grant No. 19-14-00034-П). Публикация для корректировки.",
year = "2023",
doi = "10.17816/ecogen609552",
language = "English",
volume = "21",
pages = "383--400",
journal = "Экологическая генетика",
issn = "1811-0932",
publisher = "LLC Eco-Vector",
number = "4",

}

RIS

TY - JOUR

T1 - Review of heterozygosity visualization approaches in the context of conservation research

AU - Tomarovsky, Andrey A.

AU - Totikov, Azamat A.

AU - Yakupova, Aliya R.

AU - Graphodatsky, Alexander S.

AU - Kliver, Sergei F.

N1 - Funding source. The study has been supported by Russian Science Foundation (grant No. 19-14-00034-П). Публикация для корректировки.

PY - 2023

Y1 - 2023

N2 - The assessment of heterozygosity level is one of the key metrics in conservation biology, as it contributes to the accurate design of conservation programs for endangered species. With the development of whole-genome sequencing technologies, it is now possible to more accurately estimate heterozygosity not only at the organismal level, but also at the population and species level. Contemporary conservation studies involve the processing of large volumes of whole-genome data, leading to problems of interpretation and necessitates the study of modern visualization methods for clear and correct presentation of results. In this review, we comprehensively examine the main types of visualization of heterozygosity assessments obtained using various approaches. We delve into the theory underlying each visualization method and discuss their characteristics using examples from studies of non-model species with different conservation statuses. The review provides insight into current tools for heterozygosity assessment and subsequent visualization, as well as current trends in this field.

AB - The assessment of heterozygosity level is one of the key metrics in conservation biology, as it contributes to the accurate design of conservation programs for endangered species. With the development of whole-genome sequencing technologies, it is now possible to more accurately estimate heterozygosity not only at the organismal level, but also at the population and species level. Contemporary conservation studies involve the processing of large volumes of whole-genome data, leading to problems of interpretation and necessitates the study of modern visualization methods for clear and correct presentation of results. In this review, we comprehensively examine the main types of visualization of heterozygosity assessments obtained using various approaches. We delve into the theory underlying each visualization method and discuss their characteristics using examples from studies of non-model species with different conservation statuses. The review provides insight into current tools for heterozygosity assessment and subsequent visualization, as well as current trends in this field.

UR - https://www.scopus.com/record/display.uri?eid=2-s2.0-85186475477&origin=inward&txGid=48ab3f8c3f103732988e75c6927a9fd4

UR - https://www.mendeley.com/catalogue/d98a740b-2ca3-33d9-87b4-77c8f4186873/

U2 - 10.17816/ecogen609552

DO - 10.17816/ecogen609552

M3 - Article

VL - 21

SP - 383

EP - 400

JO - Экологическая генетика

JF - Экологическая генетика

SN - 1811-0932

IS - 4

ER -

ID: 59772380