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Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672). / Degtyareva, Arina; Leberfarb, Elena; Brusentsov, Ilya et al.
Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc., 2020. p. 122-125 9214780 (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020).
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review
Harvard
Degtyareva, A, Leberfarb, E, Brusentsov, I, Kuzina, T
& Merkulova, T 2020,
Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672). in
Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020., 9214780, Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020, Institute of Electrical and Electronics Engineers Inc., pp. 122-125, 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020, Novosibirsk, Russian Federation,
06.07.2020.
https://doi.org/10.1109/CSGB51356.2020.9214780APA
Degtyareva, A., Leberfarb, E., Brusentsov, I., Kuzina, T.
, & Merkulova, T. (2020).
Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672). In
Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020 (pp. 122-125). [9214780] (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020). Institute of Electrical and Electronics Engineers Inc..
https://doi.org/10.1109/CSGB51356.2020.9214780Vancouver
Degtyareva A, Leberfarb E, Brusentsov I, Kuzina T
, Merkulova T.
Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672). In Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc. 2020. p. 122-125. 9214780. (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020). doi: 10.1109/CSGB51356.2020.9214780
Author
Degtyareva, Arina ; Leberfarb, Elena ; Brusentsov, Ilya et al. /
Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672). Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc., 2020. pp. 122-125 (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020).
BibTeX
@inproceedings{c78fb6498bc0411ab8bbad925d3fe888,
title = "Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672)",
abstract = "In a previous study using a new bioinformatic approach based on Chip-Seq data with antibodies against various transcription factors and histone modifications, ChiA-PET, RNA-seq and ICGC data, 32 potentially regulatory single - nucleotide polymorphisms (rSNPs) were associated with colorectal cancer. In this study, a functional analysis of 6 of these polymorphisms was performed using EMSA and the luciferase reporter system. These nucleotide substitutions have been shown to alter the binding of nuclear extract proteins and influence the expression of the reporter gene.",
keywords = "Electrophoretic Mobility Shift Assay (EMSA), gene expression, luciferase assay, regulatory SNP (rSNP)",
author = "Arina Degtyareva and Elena Leberfarb and Ilya Brusentsov and Tatiana Kuzina and Tatiana Merkulova",
year = "2020",
month = jul,
doi = "10.1109/CSGB51356.2020.9214780",
language = "English",
series = "Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020",
publisher = "Institute of Electrical and Electronics Engineers Inc.",
pages = "122--125",
booktitle = "Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020",
address = "United States",
note = "2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020 ; Conference date: 06-07-2020 Through 10-07-2020",
}
RIS
TY - GEN
T1 - Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672)
AU - Degtyareva, Arina
AU - Leberfarb, Elena
AU - Brusentsov, Ilya
AU - Kuzina, Tatiana
AU - Merkulova, Tatiana
PY - 2020/7
Y1 - 2020/7
N2 - In a previous study using a new bioinformatic approach based on Chip-Seq data with antibodies against various transcription factors and histone modifications, ChiA-PET, RNA-seq and ICGC data, 32 potentially regulatory single - nucleotide polymorphisms (rSNPs) were associated with colorectal cancer. In this study, a functional analysis of 6 of these polymorphisms was performed using EMSA and the luciferase reporter system. These nucleotide substitutions have been shown to alter the binding of nuclear extract proteins and influence the expression of the reporter gene.
AB - In a previous study using a new bioinformatic approach based on Chip-Seq data with antibodies against various transcription factors and histone modifications, ChiA-PET, RNA-seq and ICGC data, 32 potentially regulatory single - nucleotide polymorphisms (rSNPs) were associated with colorectal cancer. In this study, a functional analysis of 6 of these polymorphisms was performed using EMSA and the luciferase reporter system. These nucleotide substitutions have been shown to alter the binding of nuclear extract proteins and influence the expression of the reporter gene.
KW - Electrophoretic Mobility Shift Assay (EMSA)
KW - gene expression
KW - luciferase assay
KW - regulatory SNP (rSNP)
UR - http://www.scopus.com/inward/record.url?scp=85094823809&partnerID=8YFLogxK
UR - https://elibrary.ru/item.asp?id=44042377
U2 - 10.1109/CSGB51356.2020.9214780
DO - 10.1109/CSGB51356.2020.9214780
M3 - Conference contribution
AN - SCOPUS:85094823809
T3 - Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020
SP - 122
EP - 125
BT - Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020
Y2 - 6 July 2020 through 10 July 2020
ER -
