ESEEM Reveals Bound Substrate Histidine in the ABC Transporter HisQMP 2. / Isaev, Nikolay; Heuveling, Johanna; Ivanisenko, Nikita et al.
In: Applied Magnetic Resonance, Vol. 50, No. 7, 01.07.2019, p. 883-893.Research output: Contribution to journal › Article › peer-review
}
TY - JOUR
T1 - ESEEM Reveals Bound Substrate Histidine in the ABC Transporter HisQMP 2
AU - Isaev, Nikolay
AU - Heuveling, Johanna
AU - Ivanisenko, Nikita
AU - Schneider, Erwin
AU - Steinhoff, Heinz Jürgen
N1 - Publisher Copyright: © 2019, Springer-Verlag GmbH Austria, part of Springer Nature.
PY - 2019/7/1
Y1 - 2019/7/1
N2 - Localization of substrates in membrane proteins is an important but challenging task. In this paper, we show that deuterium electron spin echo envelope modulation spectroscopy ( 2 H ESEEM) combined with site-directed spin labeling is a powerful tool to localize the substrate, histidine-d5, in the ABC transporter HisQMP 2 . Based on a homology model and spin label rotamer analyses, we calculated 2 H ESEEM spectra for eight possible labeling positions close to the putative substrate-binding site. Experimental 2 H ESEEM spectra were determined with spin labels bound either at position 169 of HisM, for which a detectable 2 H ESEEM signal was calculated, or with a spin label bound at position 54 of HisQ as a negative control. The agreement between the calculated and experimental ESEEM spectra provides strong evidence for the histidine located in a binding site primarily liganded by residues of HisM as proposed by the homology model.
AB - Localization of substrates in membrane proteins is an important but challenging task. In this paper, we show that deuterium electron spin echo envelope modulation spectroscopy ( 2 H ESEEM) combined with site-directed spin labeling is a powerful tool to localize the substrate, histidine-d5, in the ABC transporter HisQMP 2 . Based on a homology model and spin label rotamer analyses, we calculated 2 H ESEEM spectra for eight possible labeling positions close to the putative substrate-binding site. Experimental 2 H ESEEM spectra were determined with spin labels bound either at position 169 of HisM, for which a detectable 2 H ESEEM signal was calculated, or with a spin label bound at position 54 of HisQ as a negative control. The agreement between the calculated and experimental ESEEM spectra provides strong evidence for the histidine located in a binding site primarily liganded by residues of HisM as proposed by the homology model.
KW - ELECTRON-SPIN-ECHO
KW - ENVELOPE MODULATION
KW - WATER CONCENTRATION
KW - EPR SPECTROSCOPY
KW - MEMBRANE
KW - BINDING
KW - RADICALS
KW - INVESTIGATE
KW - DIVERSITY
KW - PROTEINS
UR - http://www.scopus.com/inward/record.url?scp=85061999959&partnerID=8YFLogxK
U2 - 10.1007/s00723-019-01114-y
DO - 10.1007/s00723-019-01114-y
M3 - Article
AN - SCOPUS:85061999959
VL - 50
SP - 883
EP - 893
JO - Applied Magnetic Resonance
JF - Applied Magnetic Resonance
SN - 0937-9347
IS - 7
ER -
ID: 18623393