A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity

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A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity. / Kurgina, T. A.; Anarbaev, R. O.; Sukhanova, M. V. et al.

In: Analytical Biochemistry, Vol. 545, 15.03.2018, p. 91-97.

Research output: Contribution to journal › Article › peer-review

BibTeX

@article{198d07437dae4383951c831f66d7bd54,

title = "A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity",

abstract = "Poly(ADP-ribose) polymerase 1 (PARP1) is a key enzyme that regulates important cellular processes, including DNA repair. PARP1 binds to a DNA damage site and synthesizes poly(ADP-ribose) chains (PARs), which serve as a signal of DNA damage for other DNA repair enzymes. PARP1 is a recognized target for the development of anti-cancer drugs. In this work, a method is developed that makes it possible to investigate the complex formation of PARP1 with DNA as well as its dissociation by detecting the fluorescence anisotropy of this complex during the poly(ADP-ribose) synthesis. The method allows investigation of the inhibition of PARP1 activity in the presence of its inhibitors. In this work, we demonstrated that PARP1 is activated by DNA duplexes containing a damage and a fluorophore at the 3′-end of one of the DNA duplex chains. The effects of the clinical inhibitor olaparib on the activity of PARP1 was studied. It was shown that olaparib has no influence on the binding of PARP1 to the model DNA structures used, but it significantly inhibits the poly(ADP-ribosyl)ation of PARP1. The proposed convenient method for the real-time determination of the PARP1 activity can be used to screen PARP1 inhibitors with the calculation of quantitative inhibition parameters.",

keywords = "Assay, Enzyme activity, Fluorescence anisotropy, Poly(ADP-ribose) polymerase 1, Real-time detection, Phthalazines/chemistry, Humans, Structure-Activity Relationship, Dose-Response Relationship, Drug, Time Factors, Enzyme Inhibitors/chemistry, Fluorescence Polarization, Poly (ADP-Ribose) Polymerase-1/analysis, Piperazines/chemistry",

author = "Kurgina, {T. A.} and Anarbaev, {R. O.} and Sukhanova, {M. V.} and Lavrik, {O. I.}",

year = "2018",

month = mar,

day = "15",

doi = "10.1016/j.ab.2017.12.033",

language = "English",

volume = "545",

pages = "91--97",

journal = "Analytical Biochemistry",

issn = "0003-2697",

publisher = "Academic Press Inc.",

}

RIS

TY - JOUR

T1 - A rapid fluorescent method for the real-time measurement of poly(ADP-ribose) polymerase 1 activity

AU - Kurgina, T. A.

AU - Anarbaev, R. O.

AU - Sukhanova, M. V.

AU - Lavrik, O. I.

PY - 2018/3/15

Y1 - 2018/3/15

N2 - Poly(ADP-ribose) polymerase 1 (PARP1) is a key enzyme that regulates important cellular processes, including DNA repair. PARP1 binds to a DNA damage site and synthesizes poly(ADP-ribose) chains (PARs), which serve as a signal of DNA damage for other DNA repair enzymes. PARP1 is a recognized target for the development of anti-cancer drugs. In this work, a method is developed that makes it possible to investigate the complex formation of PARP1 with DNA as well as its dissociation by detecting the fluorescence anisotropy of this complex during the poly(ADP-ribose) synthesis. The method allows investigation of the inhibition of PARP1 activity in the presence of its inhibitors. In this work, we demonstrated that PARP1 is activated by DNA duplexes containing a damage and a fluorophore at the 3′-end of one of the DNA duplex chains. The effects of the clinical inhibitor olaparib on the activity of PARP1 was studied. It was shown that olaparib has no influence on the binding of PARP1 to the model DNA structures used, but it significantly inhibits the poly(ADP-ribosyl)ation of PARP1. The proposed convenient method for the real-time determination of the PARP1 activity can be used to screen PARP1 inhibitors with the calculation of quantitative inhibition parameters.

AB - Poly(ADP-ribose) polymerase 1 (PARP1) is a key enzyme that regulates important cellular processes, including DNA repair. PARP1 binds to a DNA damage site and synthesizes poly(ADP-ribose) chains (PARs), which serve as a signal of DNA damage for other DNA repair enzymes. PARP1 is a recognized target for the development of anti-cancer drugs. In this work, a method is developed that makes it possible to investigate the complex formation of PARP1 with DNA as well as its dissociation by detecting the fluorescence anisotropy of this complex during the poly(ADP-ribose) synthesis. The method allows investigation of the inhibition of PARP1 activity in the presence of its inhibitors. In this work, we demonstrated that PARP1 is activated by DNA duplexes containing a damage and a fluorophore at the 3′-end of one of the DNA duplex chains. The effects of the clinical inhibitor olaparib on the activity of PARP1 was studied. It was shown that olaparib has no influence on the binding of PARP1 to the model DNA structures used, but it significantly inhibits the poly(ADP-ribosyl)ation of PARP1. The proposed convenient method for the real-time determination of the PARP1 activity can be used to screen PARP1 inhibitors with the calculation of quantitative inhibition parameters.

KW - Assay

KW - Enzyme activity

KW - Fluorescence anisotropy

KW - Poly(ADP-ribose) polymerase 1

KW - Real-time detection

KW - Phthalazines/chemistry

KW - Humans

KW - Structure-Activity Relationship

KW - Dose-Response Relationship, Drug

KW - Time Factors

KW - Enzyme Inhibitors/chemistry

KW - Fluorescence Polarization

KW - Poly (ADP-Ribose) Polymerase-1/analysis

KW - Piperazines/chemistry

UR - http://www.scopus.com/inward/record.url?scp=85040636217&partnerID=8YFLogxK

U2 - 10.1016/j.ab.2017.12.033

DO - 10.1016/j.ab.2017.12.033

M3 - Article

C2 - 29326071

AN - SCOPUS:85040636217

VL - 545

SP - 91

EP - 97

JO - Analytical Biochemistry

JF - Analytical Biochemistry

SN - 0003-2697

ER -

ID: 10426076