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  1. 2025

  2. Evaluation of Eukaryotic mRNA Coding Potential

    Kochetov, A. V., 2025, Methods in Molecular Biology. Vol. 2859. p. 319-331 13 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceeding › Article in an anthology › peer-review

  3. 2024

  4. Reduction in Cold-Induced Sweetening by Cas9 Endonuclease-Mediated Knockout of the POTATO VACUOLAR INVERTASE 1 Gene in the Cultivar ‘Symfonia’

    Egorova, A. A., Zykova, T. E., Kostina, N. E., Saboiev, I. A., Koloshina, K. A., Filipenko, E. A., Hoffie, I., Hertig, C., Hiekel, S., Kumlehn, J., Kochetov, A. V. & Gerasimova, S. V., 5 Oct 2024, In: Potato Research. 23 p.

    Research output: Contribution to journal › Article › peer-review

  5. 2023

  6. Assembly and Analysis of Plastomes for 15 Potato Cultivars Grown in Russia

    Karetnikov, D. I., Salina, E. A., Kochetov, A. V. & Afonnikov, D. A., Jun 2023, In: Agronomy. 13, 6, 1454.

    Research output: Contribution to journal › Article › peer-review

  7. Abnormal mTOR Signaling Pathway Activity in Autism Spectrum Disorders: Prospects of Mechanism-Based Therapy

    Trifonova, E. A., Kotliarova, A. A. & Kochetov, A. V., Apr 2023, In: Molecular Biology. 57, 2, p. 235-244 10 p.

    Research output: Contribution to journal › Article › peer-review

  8. Analysis of Genome Structure and Its Variations in Potato Cultivars Grown in Russia

    Karetnikov, D. I., Vasiliev, G. V., Toshchakov, S. V., Shmakov, N. A., Genaev, M. A., Nesterov, M. A., Ibragimova, S. M., Rybakov, D. A., Gavrilenko, T. A., Salina, E. A., Patrushev, M. V., Kochetov, A. V. & Afonnikov, D. A., 16 Mar 2023, In: International Journal of Molecular Sciences. 24, 6, 5713.

    Research output: Contribution to journal › Article › peer-review

  9. Three Cycles of Continuous Propagation of a Severe PSTVd Strain NicTr-3 in Solanum lycopersicum cv. Rutgers Resulted in Its Attenuation and Very Mild Disease Symptoms in Potato

    Kochetov, A. V., Shmakov, N., Afonnikov, D. A., Vasiliev, G. V., Shatskaya, N. V., Egorova, A. A., Mironenko, N. V., Lashina, N. M., Khiutti, A. V. & Afanasenko, O. S., Mar 2023, In: Agronomy. 13, 3, 684.

    Research output: Contribution to journal › Article › peer-review

  10. Аномальная активность сигнального пути mTOR в расстройствах аутистического спектра: возможности механизмобоснованной терапии

    Trifonova, E. A., Kotliarova, A. A. & Kochetov, A. V., 2023, In: Molekuliarnaia biologiia. 57, 2, p. 243-253 11 p., 9.

    Research output: Contribution to journal › Review article › peer-review

  11. 2022

  12. Developmental and hormonal regulation of Arabidopsis thaliana ornithine-delta-aminotransferase

    Egorova, A. A., Gerasimova, S. V. & Kochetov, A. V., Mar 2022, In: Vavilovskii Zhurnal Genetiki i Selektsii. 26, 2, p. 153-158 6 p., 5.

    Research output: Contribution to journal › Article › peer-review

  13. Molecular and Genetic Aspects of Potato Response to Late Blight Infection

    Golubeva, T. S., Cherenko, V. A., Sinitsyna, O. I. & Kochetov, A. V., Feb 2022, In: Russian Journal of Genetics. 58, 2, p. 123-131 9 p., 1.

    Research output: Contribution to journal › Article › peer-review

  14. Abnormal mTOR Activity in Pediatric Autoimmune Neuropsychiatric and MIA-Associated Autism Spectrum Disorders

    Trifonova, E. A., Mustafin, Z. S., Lashin, S. A. & Kochetov, A. V., 16 Jan 2022, In: International Journal of Molecular Sciences. 23, 2, 967.

    Research output: Contribution to journal › Review article › peer-review

  15. 2021

  16. NLR genes related transcript sets in potato cultivars bearing genetic material of wild Mexican solanum species

    Kochetov, A. V., Afonnikov, D. A., Shmakov, N., Vasiliev, G. V., Antonova, O. Y., Shatskaya, N. V., Glagoleva, A. Y., Ibragimova, S. M., Khiutti, A., Afanasenko, O. S. & Gavrilenko, T. A., Dec 2021, In: Agronomy. 11, 12, 2426.

    Research output: Contribution to journal › Article › peer-review

  17. Do autism spectrum and autoimmune disorders share predisposition gene signature due to mtor signaling pathway controlling expression?

    Trifonova, E. A., Klimenko, A. I., Mustafin, Z. S., Lashin, S. A. & Kochetov, A. V., 16 May 2021, In: International Journal of Molecular Sciences. 22, 10, 5248.

    Research output: Contribution to journal › Article › peer-review

  18. Рибосомное профилирование как инструмент исследования трансляции у растений: основные итоги, проблемы и перспективы

    Afonnikov, D. A., Sinitsyna, O. I., Golubeva, T. S., Shmakov, N. A. & Kochetov, A. V., Mar 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 3, p. 251-259 9 p., 1.

    Research output: Contribution to journal › Article › peer-review

  19. Вироид веретеновидности клубней картофеля

    Kochetov, A. V., Pronozin, A. Y., Shatskaya, N. V., Afonnikov, D. A. & Afanasenko, O. S., 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 3, p. 269-275 7 p., 3.

    Research output: Contribution to journal › Article › peer-review

  20. Генетические аспекты устойчивости картофеля к фитофторозу

    Frolova, T. S., Cherenko, V. A., Sinitsyna, O. I. & Kochetov, A. V., 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 2, p. 164-170 7 p., 4.

    Research output: Contribution to journal › Article › peer-review

  21. 2020

  22. Conversion of hulled into naked barley by Cas endonuclease-mediated knockout of the NUD gene

    Gerasimova, S. V., Hertig, C., Korotkova, A. M., Kolosovskaya, E. V., Otto, I., Hiekel, S., Kochetov, A. V., Khlestkina, E. K. & Kumlehn, J., 1 Oct 2020, In: BMC Plant Biology. 20, Suppl 1, 12 p., 255.

    Research output: Contribution to journal › Article › peer-review

  23. The mechanism of potato resistance to Globodera rostochiensis: comparison of root transcriptomes of resistant and susceptible Solanum phureja genotypes

    Kochetov, A. V., Egorova, A. A., Glagoleva, A. Y., Strygina, K. V., Khlestkina, E. K., Gerasimova, S. V., Shatskaya, N. V., Vasilyev, G. V., Afonnikov, D. A., Shmakov, N. A., Antonova, O. Y., Alpatyeva, N. V., Khiutti, A., Afanasenko, O. S. & Gavrilenko, T. A., 1 Oct 2020, In: BMC Plant Biology. 20, Suppl 1, 13 p., 350.

    Research output: Contribution to journal › Article › peer-review

  24. Lipophilic Metabolites from Five-Needle Pines, Pinus armandii and Pinus kwangtungensis, Exhibiting Antibacterial Activity

    Shpatov, A. V., Frolova, T. S., Popov, S. A., Sinitsyna, O. I., Salnikova, O. I., Zheng, G., Yan, L., Sinelnikova, N. V., Pshennikova, L. M. & Kochetov, A. V., 1 Aug 2020, In: Chemistry and Biodiversity. 17, 8, 15 p., e2000201.

    Research output: Contribution to journal › Article › peer-review

  25. 2019

  26. The mTOR signaling pathway activity and vitamin d availability control the expression of most autism predisposition genes

    Trifonova, E. A., Klimenko, A. I., Mustafin, Z. S., Lashin, S. A. & Kochetov, A. V., 15 Dec 2019, In: International Journal of Molecular Sciences. 20, 24, 14 p., 6332.

    Research output: Contribution to journal › Article › peer-review

  27. Genotoxic activity of 1,2,3-triazolyl modified furocoumarins and 2,3-dihydrofurocoumarins

    Kremis, S. A., Baev, D. S., Lipeeva, A. V., Shults, E. E., Tolstikova, T. G., Sinitsyna, O. I., Kochetov, A. V. & Frolova, T. S., 1 Nov 2019, In: Journal of Biochemical and Molecular Toxicology. 33, 11, p. e22396 6 p., e22396.

    Research output: Contribution to journal › Article › peer-review

  28. Fluorescent labeling of ursolic acid with FITC for investigation of its cytotoxic activity using confocal microscopy

    Frolova, T. S., Lipeeva, A. V., Baev, D. S., Baiborodin, S. I., Orishchenko, К. E., Kochetov, A. V. & Sinitsyna, O. I., 1 Jun 2019, In: Bioorganic Chemistry. 87, p. 876-887 12 p.

    Research output: Contribution to journal › Article › peer-review

  29. Genomics research at Bioinformatics of Genome Regulation and Structure\ Systems Biology (BGRS\SB) conferences in Novosibirsk

    Orlov, Y. L., Kochetov, A. V., Li, G. & Kolchanov, N. A., 8 May 2019, In: BMC Genomics. 20, Suppl 3, 5 p., 322.

    Research output: Contribution to journal › Article › peer-review

  30. Computational models in genetics at BGRS-2018

    Orlov, Y. L., Tatarinova, T. V. & Kochetov, A. V., 18 Mar 2019, In: BMC Genetics. 20, Suppl 1, p. 28 3 p., 28.

    Research output: Contribution to journal › Article › peer-review

  31. Genetic control of anthocyanin pigmentation of potato tissues

    Strygina, K. V., Kochetov, A. V. & Khlestkina, E. K., 18 Mar 2019, In: BMC Genetics. 20, Suppl 1, p. 27 9 p., 27.

    Research output: Contribution to journal › Article › peer-review

  32. Image-based analysis of quantitative morphological characteristics of wild potato tubers using the desktop application SeedСounter

    Ivanova, K. A., Komyshev, E. G., Genaev, M. A., Egorova, A. A., Koloshina, K. A., Chalaya, N. A., Afonnikov, D. A., Kochetov, A. V., Rogozina, E. V. & Gerasimova, S. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 5, p. 519-526 8 p.

    Research output: Contribution to journal › Article › peer-review

  33. Prioritization of potato genes involved in the formation of agronomically valuable traits using the SOLANUM TUBEROSUM knowledge base

    Demenkov, P. S., Saik, O. V., Ivanisenko, T. V., Kolchanov, N. A., Kochetov, A. V. & Ivanisenko, V. A., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 312-319 8 p.

    Research output: Contribution to journal › Article › peer-review

  34. 2018

  35. Converting Hulled into Naked Barley through Targeted Knock-Out of the Nud1 Gene

    Gerasimova, S., Hertig, C., Korotkova, A., Otto, I., Hiekel, S., Kochetov, A., Kumlehn, J. & Khlestkina, E., Aug 2018, In: In Vitro Cellular and Developmental Biology - Plant. 54, p. S101-S101 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  36. Targeted genome modification in protoplasts of a highly regenerable Siberian barley cultivar using RNA-guided Cas9 endonuclease

    Gerasimova, S. V., Korotkova, A. M., Hertig, C., Hiekel, S., Hoffie, R., Budhagatapalli, N., Otto, I., Hensel, G., Shumny, V. K., Kochetov, A. V., Kumlehn, J. & Khlestkina, E. K., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 8, p. 1033-1039 7 p.

    Research output: Contribution to journal › Article › peer-review

  37. The morphogenic potential of Siberian potato cultivars in tissue cultures

    Ibragimova, S. M., Romanova, A. V., Myzgina, G. K. & Kochetov, A. V., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 3, p. 316-320 5 p.

    Research output: Contribution to journal › Article › peer-review

  38. 2017

  39. Differential expression of NBS-LRR-encoding genes in the root transcriptomes of two Solanum phureja genotypes with contrasting resistance to Globodera rostochiensis

    Kochetov, A. V., Glagoleva, A. Y., Strygina, K. V., Khlestkina, E. K., Gerasimova, S. V., Ibragimova, S. M., Shatskaya, N. V., Vasilyev, G. V., Afonnikov, D. A., Shmakov, N. A., Antonova, O. Y., Gavrilenko, T. A., Alpatyeva, N. V., Khiutti, A. & Afanasenko, O. S., 28 Dec 2017, In: BMC Plant Biology. 17, Suppl 2, p. 251 10 p., 251.

    Research output: Contribution to journal › Article › peer-review

  40. A database on genes increasing the resistance of wheat and its related species against pathogenic fungi

    Smirnova, O. G. & Kochetov, A. V., 1 Dec 2017, In: Russian Journal of Genetics: Applied Research. 7, 8, p. 816-821 6 p.

    Research output: Contribution to journal › Article › peer-review

  41. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Nov 2017, In: Russian Journal of Genetics: Applied Research. 7, 7, p. 736-743 8 p.

    Research output: Contribution to journal › Article › peer-review

  42. Transgenic plants as genetic models for studying functions of plant genes

    Kochetov, A. V. & Shumny, V. K., 1 Jun 2017, In: Russian Journal of Genetics: Applied Research. 7, 4, p. 421-427 7 p.

    Research output: Contribution to journal › Article › peer-review

  43. Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots

    Omelyanchuk, N. A., Wiebe, D. S., Novikova, D. D., Levitsky, V. G., Klimova, N., Gorelova, V., Weinholdt, C., Vasiliev, G. V., Zemlyanskaya, E. V., Kolchanov, N. A., Kochetov, A. V., Grosse, I. & Mironova, V. V., 30 May 2017, In: Scientific Reports. 7, 1, p. 2489 11 p., 2489.

    Research output: Contribution to journal › Article › peer-review

  44. AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs

    Kochetov, A. V., Allmer, J., Klimenko, A. I., Zuraev, B. S., Matushkin, Y. G., Lashin, S. A. & Hancock, J., 15 Mar 2017, In: Bioinformatics. 33, 6, p. 923-925 3 p.

    Research output: Contribution to journal › Article › peer-review

  45. Genome editing system CRISPR/CAS9 and peculiarities of its application in monocots

    Gerasimova, S. V., Khlestkina, E. K., Kochetov, A. V. & Shumny, V. K., 1 Mar 2017, In: Russian Journal of Plant Physiology. 64, 2, p. 141-155 15 p.

    Research output: Contribution to journal › Review article › peer-review

  46. Status and prospects of marker-assisted and genomic plant breeding

    Kolchanov, N. A., Kochetov, A. V., Salina, E. A., Pershina, L. A., Khlestkina, E. K. & Shumny, V. K., 1 Mar 2017, In: Herald of the Russian Academy of Sciences. 87, 2, p. 125-131 7 p.

    Research output: Contribution to journal › Article › peer-review

  47. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 1, p. 96-103 8 p.

    Research output: Contribution to journal › Article › peer-review

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