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  1. 2025

  2. Metabolomic and gene networks approaches reveal the role of mitochondrial membrane proteins in response of human melanoma cells to THz radiation

    Butikova, E. A., Basov, N. V., Rogachev, A. D., Gaisler, E. V., Ivanisenko, V. A., Demenkov, P. S., Makarova, A. L. A., Ivanisenko, T. V., Razumov, I. A., Kolomeyets, D. A., Cheresiz, S. V., Solovieva, O. I., Larionov, K. P., Sotnikova, Y. S., Patrushev, Y. V., Kolchanov, N. A., Pokrovsky, A. G., Vinokurov, N. A., Kanygin, V. V., Popik, V. M., & 1 othersShevchenko, O. A., Mar 2025, In: Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1870, 2, 17 p., 159595.

    Research output: Contribution to journal › Article › peer-review

  3. 2024

  4. A concept of natural genome reconstruction. Part 2. Effect of extracellular double-stranded DNA fragments on hematopoietic stem cells

    Ruzanova, V. S., Oshikhmina, S. G., Proskurina, A. S., Ritter, G. S., Kirikovich, S. S., Levites, E. V., Efremov, Y. R., Karamysheva, T. V., Meschaninova, M. I., Mamaev, A. L., Taranov, O. S., Bogachev, A. S., Sidorov, S. V., Nikonov, S. D., Leplina, O. Y., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A., Dolgova, E. V. & Bogachev, S. S., Dec 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 8, p. 993-1007 15 p.

    Research output: Contribution to journal › Article › peer-review

  5. Reconstruction and computational analysis of the microRNA regulation gene network in wheat drought response mechanisms

    Kleshchev, M. A., Maltseva, A. V., Antropova, E. A., Demenkov, P. S., Ivanisenko, T. V., Orlov, Y. L., Chao, H., Chen, M., Kolchanov, N. A. & Ivanisenko, V. A., Dec 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 8, p. 904-917 14 p.

    Research output: Contribution to journal › Article › peer-review

  6. AI-Assisted Identification of Primary and Secondary Metabolomic Markers for Postoperative Delirium

    Ivanisenko, V. A., Rogachev, A. D., Makarova, A-L. A., Basov, N. V., Gaisler, E. V., Kuzmicheva, I. N., Demenkov, P. S., Venzel, A. S., Ivanisenko, T. V., Antropova, E. A., Kolchanov, N. A., Plesko, V. V., Moroz, G. B., Lomivorotov, V. V. & Pokrovsky, A. G., Nov 2024, In: International Journal of Molecular Sciences. 25, 21, 11847.

    Research output: Contribution to journal › Article › peer-review

  7. AtSNP_TATAdb: Candidate Molecular Markers of Plant Advantages Related to Single Nucleotide Polymorphisms within Proximal Promoters of Arabidopsis thaliana L.

    Bogomolov, A., Zolotareva, K., Filonov, S., Chadaeva, I., Rasskazov, D., Sharypova, E., Podkolodnyy, N., Ponomarenko, P., Savinkova, L., Tverdokhleb, N., Khandaev, B., Kondratyuk, E., Podkolodnaya, O., Zemlyanskaya, E., Kolchanov, N. A. & Ponomarenko, M., Jan 2024, In: International Journal of Molecular Sciences. 25, 1, 607.

    Research output: Contribution to journal › Article › peer-review

  8. Gene networks and metabolomic screening analysis revealed specific pathways of amino acid and acylcarnitine profile alterations in blood plasma of patients with Parkinson’s disease and vascular parkinsonism

    Makarova, A. A., Melnikova, P. M., Rogachev, A. D., Demenkov, P. S., Ivanisenko, T. V., Predtechenskaya, E. V., Karmanov, S. Y., Koval, V. V., Pokrovsky, A. G., Lavrik, I. N., Kolchanov, N. A. & Ivanisenko, V. A., 2024, In: Вавиловский журнал генетики и селекции. 28, 8, p. 927-939 13 p.

    Research output: Contribution to journal › Article › peer-review

  9. Stimulation of mouse hematopoietic stem cells by angiogenin and DNA preparations

    Potter, E. A., Dolgova, E. V., Proskurina, A. S., Ruzanova, V. S., Efremov, Y. R., Kirikovich, S. S., Oshikhmina, S. G., Mamaev, A. L., Taranov, O. S., Bryukhovetskiy, A. S., Grivtsova, L. U., Kolchanov, N. A., Ostanin, A. A., Chernykh, E. R. & Bogachev, S. S., 2024, In: Brazilian journal of medical and biological research. 57, e13072.

    Research output: Contribution to journal › Article › peer-review

  10. 2023

  11. Gene networks for use in metabolomic data analysis of blood plasma from patients with postoperative delirium

    Ivanisenko, V. A., Basov, N. V., Makarova, A. A., Venzel, A. S., Rogachev, A. D., Demenkov, P. S., Ivanisenko, T. V., Kleshchev, M. A., Gaisler, E. V., Moroz, G. B., Plesko, V. V., Sotnikova, Y. S., Patrushev, Y. V., Lomivorotov, V. V., Kolchanov, N. A. & Pokrovsky, A. G., Dec 2023, In: Vavilovskii Zhurnal Genetiki i Selektsii. 27, 7, p. 768-775 8 p.

    Research output: Contribution to journal › Article › peer-review

  12. Reconstruction and analysis of the gene regulatory network for cell wall function in Arabidopsis thaliana L. leaves in response to water deficit

    Volyanskaya, A. R., Antropova, E. A., Zubairova, U. S., Demenkov, P. S., Venzel, A. S., Orlov, Y. L., Makarova, A. A., Ivanisenko, T. V., Gorshkova, T. A., Aglyamova, A. R., Kolchanov, N. A., Chen, M. & Ivanisenko, V. A., Dec 2023, In: Vavilovskii Zhurnal Genetiki i Selektsii. 27, 8, p. 1031-1041 11 p.

    Research output: Contribution to journal › Article › peer-review

  13. BGRS: bioinformatics of genome regulation and data integration

    Orlov, Y. L., Chen, M., Kolchanov, N. A. & Hofestädt, R., 1 Sept 2023, In: Journal of integrative bioinformatics. 20, 3, 20230032.

    Research output: Contribution to journal › Article › peer-review

  14. Reconstruction of the regulatory hypermethylation network controlling hepatocellular carcinoma development during hepatitis C viral infection

    Antropova, E. A., Khlebodarova, T. M., Demenkov, P. S., Volianskaia, A. R., Venzel, A. S., Ivanisenko, N. V., Gavrilenko, A. D., Ivanisenko, T. V., Adamovskaya, A. V., Revva, P. M., Kolchanov, N. A., Lavrik, I. N. & Ivanisenko, V. A., 1 Sept 2023, In: Journal of integrative bioinformatics. 20, 3, 12 p.

    Research output: Contribution to journal › Article › peer-review

  15. Candidate SNP Markers Significantly Altering the Affinity of TATA-Binding Protein for the Promoters of Human Hub Genes for Atherogenesis, Atherosclerosis and Atheroprotection

    Bogomolov, A., Filonov, S., Chadaeva, I., Rasskazov, D., Khandaev, B., Zolotareva, K., Kazachek, A., Oshchepkov, D., Ivanisenko, V. A., Demenkov, P., Podkolodnyy, N., Kondratyuk, E., Ponomarenko, P., Podkolodnaya, O., Mustafin, Z., Savinkova, L., Kolchanov, N., Tverdokhleb, N. & Ponomarenko, M., 19 May 2023, In: International Journal of Molecular Sciences. 24, 10, 9010.

    Research output: Contribution to journal › Article › peer-review

  16. Research Topics of the Bioinformatics of Gene Regulation

    Orlov, Y. L., Anashkina, A. A., Kumeiko, V. V., Chen, M. & Kolchanov, N. A., 15 May 2023, In: International Journal of Molecular Sciences. 24, 10, 8774.

    Research output: Contribution to journal › Article › peer-review

  17. Impact of Double-Stranded RNA Internalization on Hematopoietic Progenitors and Krebs-2 Cells and Mechanism

    Ritter, G. S., Proskurina, A. S., Meschaninova, M. I., Potter, E. A., Petrova, D. D., Ruzanova, V. S., Dolgova, E. V., Kirikovich, S. S., Levites, E. V., Efremov, Y. R., Nikolin, V. P., Popova, N. A., Venyaminova, A. G., Taranov, O. S., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A. & Bogachev, S. S., 2 Mar 2023, In: International Journal of Molecular Sciences. 24, 5, 4858.

    Research output: Contribution to journal › Article › peer-review

  18. Differentially Expressed Genes and Molecular Susceptibility to Human Age-Related Diseases

    Shikhevich, S., Chadaeva, I., Khandaev, B., Kozhemyakina, R., Zolotareva, K., Kazachek, A., Oshchepkov, D., Bogomolov, A., Klimova, N. V., Ivanisenko, V. A., Demenkov, P., Mustafin, Z., Markel, A., Savinkova, L., Kolchanov, N. A., Kozlov, V. & Ponomarenko, M., 16 Feb 2023, In: International Journal of Molecular Sciences. 24, 4, 3996.

    Research output: Contribution to journal › Article › peer-review

  19. 2022

  20. The New General Biological Property of Stem-like Tumor Cells (Part II: Surface Molecules, Which Belongs to Distinctive Groups with Particular Functions, Form a Unique Pattern Characteristic of a Certain Type of Tumor Stem-like Cells)

    Petrova, D. D., Dolgova, E. V., Proskurina, A. S., Ritter, G. S., Ruzanova, V. S., Efremov, Y. R., Potter, E. A., Kirikovich, S. S., Levites, E. V., Taranov, O. S., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A. & Bogachev, S. S., 1 Dec 2022, In: International Journal of Molecular Sciences. 23, 24, 15800.

    Research output: Contribution to journal › Article › peer-review

  21. Algorithm for the Reconstruction of Mathematical Frame Models of Bacterial Transcription Regulation

    Lakhova, T. N., Kazantsev, F. V., Mukhin, A. M., Kolchanov, N. A., Matushkin, Y. G. & Lashin, S. A., Dec 2022, In: Mathematics. 10, 23, 4480.

    Research output: Contribution to journal › Article › peer-review

  22. Plasma metabolomics and gene regulatory networks analysis reveal the role of nonstructural SARS-CoV-2 viral proteins in metabolic dysregulation in COVID-19 patients

    Ivanisenko, V. A., Gaisler, E. V., Basov, N. V., Rogachev, A. D., Cheresiz, S. V., Ivanisenko, T. V., Demenkov, P. S., Mishchenko, E. L., Khripko, O. P., Khripko, Y. I., Voevoda, S. M., Karpenko, T. N., Velichko, A. J., Voevoda, M. I., Kolchanov, N. A. & Pokrovsky, A. G., Dec 2022, In: Scientific Reports. 12, 1, 12 p., 19977.

    Research output: Contribution to journal › Article › peer-review

  23. The New Version of the ANDDigest Tool with Improved AI-Based Short Names Recognition

    Ivanisenko, T. V., Demenkov, P. S., Kolchanov, N. A. & Ivanisenko, V. A., Dec 2022, In: International Journal of Molecular Sciences. 23, 23, 14934.

    Research output: Contribution to journal › Article › peer-review

  24. The new general biological property of stem-like tumor cells Part I. Peculiarities of the process of the double-stranded DNA fragments internalization into stem-like tumor cells

    Ritter, G. S., Dolgova, E. V., Petrova, D. D., Efremov, Y. R., Proskurina, A. S., Potter, E. A., Ruzanova, V. S., Kirikovich, S. S., Levites, E. V., Taranov, O. S., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A. & Bogachev, S. S., 8 Sept 2022, In: Frontiers in Genetics. 13, 954395.

    Research output: Contribution to journal › Article › peer-review

  25. Changes in the number and morphology of blood cells in mice pretreated with RNA preparations and exposed to 8 Gy of gamma radiation

    Dubatolova, T. D., Ritter, G. S., Proskurina, A. S., Kisaretova, P. E., Nikolin, V. P., Popova, N. A., Ruzanova, V. S., Taranov, O. S., Kolchanov, N. A. & Bogachev, S. S., 2022, In: International Journal of Radiation Research. 20, 2, p. 361-368 8 p.

    Research output: Contribution to journal › Article › peer-review

  26. 2021

  27. Leave or stay: Simulating motility and fitness of microorganisms in dynamic aquatic ecosystems

    Klimenko, A., Matushkin, Y., Kolchanov, N. & Lashin, S., Oct 2021, In: Biology. 10, 10, 1019.

    Research output: Contribution to journal › Article › peer-review

  28. A bioinformatics model of human diseases on the basis of differentially expressed genes (Of domestic versus wild animals) that are orthologs of human genes associated with reproductive‐potential changes

    Vasiliev, G., Chadaeva, I., Rasskazov, D., Ponomarenko, P., Sharypova, E., Drachkova, I., Bogomolov, A., Savinkova, L., Ponomarenko, M., Kolchanov, N., Osadchuk, A., Oshchepkov, D. & Osadchuk, L., 1 Mar 2021, In: International Journal of Molecular Sciences. 22, 5, p. 1-17 17 p., 2346.

    Research output: Contribution to journal › Article › peer-review

  29. 2020

  30. The role of death domain proteins in host response upon SARS-CoV-2 infection: modulation of programmed cell death and translational applications

    Ivanisenko, N. V., Seyrek, K., Kolchanov, N. A., Ivanisenko, V. A. & Lavrik, I. N., 1 Dec 2020, In: Cell Death Discovery. 6, 1, 10 p., 101.

    Research output: Contribution to journal › Review article › peer-review

  31. Young «oil site» of the Uzon Caldera as a habitat for unique microbial life

    Peltek, S. E., Bryanskaya, A. V., Uvarova, Y. E., Rozanov, A. S., Ivanisenko, T. V., Ivanisenko, V. A., Lazareva, E. V., Saik, O. V., Efimov, V. M., Zhmodik, S. M., Taran, O. P., Slynko, N. M., Shekhovtsov, S. V., Parmon, V. N., Dobretsov, N. L. & Kolchanov, N. A., Nov 2020, In: BMC Microbiology. 20, Suppl 2, 13 p., 349.

    Research output: Contribution to journal › Article › peer-review

  32. Meta-analysis of transcriptome data detected new potential players in response to dioxin exposure in humans

    Oshchepkova, E., Sizentsova, Y., Wiebe, D., Mironova, V. & Kolchanov, N., 23 Oct 2020, In: International Journal of Molecular Sciences. 21, 21, p. 1-20 20 p., 7858.

    Research output: Contribution to journal › Article › peer-review

  33. Unannotated single nucleotide polymorphisms in the TATA box of erythropoiesis genes show in vitro positive involvements in cognitive and mental disorders

    Ponomarenko, M., Sharypova, E., Drachkova, I., Chadaeva, I., Arkova, O., Podkolodnaya, O., Ponomarenko, P., Kolchanov, N. & Savinkova, L., 22 Oct 2020, In: BMC Medical Genetics. 21, Suppl 1, p. 165 14 p., 165.

    Research output: Contribution to journal › Article › peer-review

  34. Characterization of biological peculiarities of the radioprotective activity of double-stranded RNA isolated from Saccharomyces сerevisiae

    Ritter, G. S., Nikolin, V. P., Popova, N. A., Proskurina, A. S., Kisaretova, P. E., Taranov, O. S., Dubatolova, T. D., Dolgova, E. V., Potter, E. A., Kirikovich, S. S., Efremov, Y. R., Bayborodin, S. I., Romanenko, M. V., Meschaninova, M. I., Venyaminova, A. G., Kolchanov, N. A., Shurdov, M. A. & Bogachev, S. S., 1 Sept 2020, In: International Journal of Radiation Biology. 96, 9, p. 1173-1191 19 p.

    Research output: Contribution to journal › Article › peer-review

  35. The phylogeny of class b flavoprotein monooxygenases and the origin of the yucca protein family

    Turnaev, I. I., Gunbin, K. V., Suslov, V. V., Akberdin, I. R., Kolchanov, N. A. & Afonnikov, D. A., 1 Sept 2020, In: Plants. 9, 9, p. 1-22 22 p., 1092.

    Research output: Contribution to journal › Article › peer-review

  36. GPU Based Composite Elements Discovery in Large DNADatasets

    Vishnevsky, O., Bocharnikov, A. & Kolchanov, N., Jul 2020, Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc., p. 135-138 4 p. 9214777. (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  37. Candidate snp markers of atherogenesis significantly shifting the affinity of TATA-binding protein for human gene promoters show stabilizing natural selection as a sum of neutral drift accelerating atherogenesis and directional natural selection slowing it

    Ponomarenko, M., Rasskazov, D., Chadaeva, I., Sharypova, E., Drachkova, I., Oshchepkov, D., Ponomarenko, P., Savinkova, L., Oshchepkova, E., Nazarenko, M. & Kolchanov, N., 5 Feb 2020, In: International Journal of Molecular Sciences. 21, 3, 41 p., 1045.

    Research output: Contribution to journal › Article › peer-review

  38. Changes in the Hippocampal Genes Transcriptome in Depression Model Mice upon Intranasal Exposure to M2 Macrophage Secretome Factors

    Shevela, E. Y., Markova, E. V., Knyazheva, M. A., Proskurina, A. S., Efremov, Y. R., Molodtsov, V. V., Seledtsov, I. A., Ostanin, A. A., Bogachev, S. S., Kolchanov, N. A. & Chernykh, E. R., 2020, In: Mathematical Biology and Bioinformatics. 15, 2, p. 357-393 37 p.

    Research output: Contribution to journal › Article › peer-review

  39. Характеристика активной субстанции препарата дрожжей Saccharomyces сerevisiae, обладающей радиопротекторными свойствами

    Ritter, G. S., Nikolin, V. P., Popova, N. A., Proskurina, A. S., Kisaretova, P. E., Taranov, O. S., Dubatolova, T. D., Dolgova, E. V., Potter, E. A., Kirikovich, S. S., Efremov, Y. R., Bayborodin, S. I., Romanenko, M. V., Meschaninova, M. I., Venyaminova, A. G., Kolchanov, N. A. & Bogachev, S. S., 2020, In: Vavilovskii Zhurnal Genetiki i Selektsii. 24, 6, p. 643-652 10 p.

    Research output: Contribution to journal › Article › peer-review

  40. 2019

  41. Candidate SNP Markers of Atherosclerosis That May Significantly Change the Affinity of the TATA-Binding Protein for the Human Gene Promoters

    Ponomarenko, M. P., Rasskazov, D. A., Chadaeva, I. V., Sharypova, E. B., Drachkova, I. A., Ponomarenko, P. M., Oshchepkova, E. A., Savinkova, L. K. & Kolchanov, N. A., 1 Sept 2019, In: Russian Journal of Genetics. 55, 9, p. 1137-1151 15 p.

    Research output: Contribution to journal › Article › peer-review

  42. Candidate SNP-markers of rheumatoid arthritis that can significantly alter the affinity of the TATA-binding protein for human gene promoters

    Chadaeva, I. V., Rasskazov, D. A., Sharypova, E. B., Drachkova, I. A., Oshchepkova, E. A., Savinkova, L. K., Ponomarenko, P. M., Ponomarenko, M. P., Kolchanov, N. A. & Kozlov, V. A., 1 Aug 2019, In: Вавиловский журнал генетики и селекции. 23, 8, p. 1047-1058 12 p.

    Research output: Contribution to journal › Article › peer-review

  43. Changes induced in mouse lipid metabolism by simultaneous impact of antisense oligonucleotide derivatives to apoB, PCSK9, and apoCIII mRNAs

    Oshevski, S. I., Ragino, Y. I., Kashtanova, E. V., Polonskaya, Y. V., Stakhneva, E. M., Nikolin, V. P., Popova, N. A., Kolchanov, N. A. & Voevoda, M. I., 1 Aug 2019, In: Вавиловский журнал генетики и селекции. 23, 8, p. 1020-1025 6 p.

    Research output: Contribution to journal › Article › peer-review

  44. Genomics research at Bioinformatics of Genome Regulation and Structure\ Systems Biology (BGRS\SB) conferences in Novosibirsk

    Orlov, Y. L., Kochetov, A. V., Li, G. & Kolchanov, N. A., 8 May 2019, In: BMC Genomics. 20, Suppl 3, 5 p., 322.

    Research output: Contribution to journal › Article › peer-review

  45. Spatial heterogeneity promotes antagonistic evolutionary scenarios in microbial community explained by ecological stratification: a simulation study

    Klimenko, A. I., Matushkin, Y. G., Kolchanov, N. A. & Lashin, S. A., 1 May 2019, In: Ecological Modelling. 399, p. 66-76 11 p.

    Research output: Contribution to journal › Article › peer-review

  46. Genome analysis identifies the mutant genes for common industrial Silverblue and Hedlund white coat colours in American mink

    Manakhov, A. D., Andreeva, T. V., Trapezov, O. V., Kolchanov, N. A. & Rogaev, E. I., 14 Mar 2019, In: Scientific Reports. 9, 1, p. 4581 8 p., 4581.

    Research output: Contribution to journal › Article › peer-review

  47. Evolutionary biology and biodiversity research at BGRS-2018

    Orlov, Y. L., Baranova, A. V., Kolchanov, N. A. & Moroz, L. L., 26 Feb 2019, In: BMC Evolutionary Biology. 19, Suppl 1, p. 43 3 p., 43.

    Research output: Contribution to journal › Article › peer-review

  48. Natural selection equally supports the human tendencies in subordination and domination: A Genome-wide study with in silico confirmation and in vivo validation in mice

    Chadaeva, I., Ponomarenko, P., Rasskazov, D., Sharypova, E., Kashina, E., Kleshchev, M., Ponomarenko, M., Naumenko, V., Savinkova, L., Kolchanov, N., Osadchuk, L. & Osadchuk, A., 20 Feb 2019, In: Frontiers in Genetics. 10, FEB, 16 p., 73.

    Research output: Contribution to journal › Article › peer-review

  49. Prioritization of potato genes involved in the formation of agronomically valuable traits using the SOLANUM TUBEROSUM knowledge base

    Demenkov, P. S., Saik, O. V., Ivanisenko, T. V., Kolchanov, N. A., Kochetov, A. V. & Ivanisenko, V. A., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 312-319 8 p.

    Research output: Contribution to journal › Article › peer-review

  50. Web-Based Computational Tools for the Prediction and Analysis of Posttranslational Modifications of Proteins

    Ivanisenko, V. A., Ivanisenko, T. V., Saik, O. V., Demenkov, P. S., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2019, Methods in Molecular Biology. Humana Press, Vol. 1934. p. 1-20 20 p. (Methods in Molecular Biology; vol. 1934).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  51. 2018

  52. Cancer stem cells: Emergent nature of tumor emergency

    Efremov, Y. R., Proskurina, A. S., Potter, E. A., Dolgova, E. V., Efremova, O. V., Taranov, O. S., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A. & Bogachev, S. S., 16 Nov 2018, In: Frontiers in Genetics. 9, 544.

    Research output: Contribution to journal › Article › peer-review

  53. Pluripotency gene network dynamics: System views from parametric analysis

    Akberdin, I. R., Omelyanchuk, N. A., Fadeev, S. I., Leskova, N. E., Oschepkova, E. A., Kazantsev, F. V., Matushkin, Y. G., Afonnikov, D. A. & Kolchanov, N. A., 29 Mar 2018, In: PLoS ONE. 13, 3, p. e0194464 24 p., 0194464.

    Research output: Contribution to journal › Article › peer-review

  54. Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Chadaeva, I. V., Ponomarenko, P. M., Rasskazov, D. A., Sharypova, E. B., Kashina, E. V., Zhechev, D. A., Drachkova, I. A., Arkova, O. V., Savinkova, L. K., Ponomarenko, M. P., Kolchanov, N. A., Osadchuk, L. V. & Osadchuk, A. V., 9 Feb 2018, In: BMC Genomics. 19, Suppl 3, p. 0 23 p., 0.

    Research output: Contribution to journal › Article › peer-review

  55. Argo_CUDA: Exhaustive GPU based approach for motif discovery in large DNA datasets

    Vishnevsky, O. V., Bocharnikov, A. V. & Kolchanov, N. A., 1 Feb 2018, In: Journal of Bioinformatics and Computational Biology. 16, 1, 23 p., 1740012.

    Research output: Contribution to journal › Article › peer-review

  56. Review of direct chemical and biochemical transformations of starch

    Khlestkin, V. K., Peltek, S. E. & Kolchanov, N. A., 1 Feb 2018, In: Carbohydrate Polymers. 181, p. 460-476 17 p.

    Research output: Contribution to journal › Review article › peer-review

  57. High temperature and pressure influence the interdomain orientation of Nip7 proteins from P. abyssi and P. furiosus: MD simulations

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 2 Jan 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 1, p. 68-82 15 p.

    Research output: Contribution to journal › Article › peer-review

  58. An experimental study of the effect of rare polymorphisms of human HBB, HBD and F9 promoter TATA boxes on the kinetics of interaction with the TATA-binding protein

    Sharypova, E. B., Drachkova, I. A., Kashina, E. V., Rasskazov, D. A., Ponomarenko, M. P., Ponomarenko, M. P., Kolchanov, N. A. & Savinkova, L. K., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 145-152 8 p.

    Research output: Contribution to journal › Article › peer-review

  59. An integrated information system on bioresource collections of the FASO of Russia

    Lashin, S. A., Afonnikov, D. A., Genaev, M. A., Kazantsev, F. V., Komyshev, E. G., Oschepkova, E. A., Petrov, A. V., Rasskazov, D. A., Smirnova, A. A. & Kolchanov, N. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 3, p. 386-393 8 p.

    Research output: Contribution to journal › Article › peer-review

  60. Evaluating the efficiency of the tumor-initiating stem cells eradication strategy on the example of ascite form of mouse gepatocarcinoma G-29

    Potter, E. A., Ritter, G. S., Dolgova, E. V., Proskurina, A. S., Kisaretova, P. E., Efremov, Y. R., Nikolin, V. P., Popova, N. A., Taranov, O. S., Ostanin, A. A., Chernych, E. R., Sidorov, S. V., Kolchanov, N. A. & Bogachev, S. S., 1 Jan 2018, In: Voprosy Onkologii. 64, 6, p. 818-829 12 p.

    Research output: Contribution to journal › Article › peer-review

  61. 2017

  62. Candidate SNP markers of familial and sporadic Alzheimer's diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Ponomarenko, P., Chadaeva, I., Rasskazov, D. A., Sharypova, E., Kashina, E. V., Drachkova, I., Zhechev, D., Ponomarenko, M. P., Savinkova, L. K. & Kolchanov, N., 20 Jul 2017, In: Frontiers in Aging Neuroscience. 9, JUL, p. 231 24 p., 231.

    Research output: Contribution to journal › Article › peer-review

  63. Molecular mechanisms of the interaction between the processes of the cell response to mechanical stress and neuronal apoptosis in primary open-angle glaucoma

    Saik, O. V., Konovalova, N. A., Demenkov, P. S., Ivanisenko, N. V., Ivanisenko, T. V., Ivanoshchuk, D. E., Konovalova, O. S., Podkolodnaya, O. A., Lavrik, I. N., Kolchanov, N. A. & Ivanisenko, V. A., 1 Jul 2017, In: Russian Journal of Genetics: Applied Research. 7, 5, p. 558-564 7 p.

    Research output: Contribution to journal › Article › peer-review

  64. SNP_TATA_Comparator: genomewide landmarks for preventive personalized medicine

    Ponomarenko, M., Rasskazov, D., Chadaeva, I., Sharypova, E., Ponomarenko, P., Arkova, O., Kashina, E., Ivanisenko, N., Zhechev, D., Savinkova, L. & Kolchanov, N., 1 Jun 2017, In: Frontiers in bioscience (Scholar edition). 9, p. 276-306 31 p.

    Research output: Contribution to journal › Review article › peer-review

  65. Systems biology analysis of the WOX5 gene and its functions in the root stem cell niche

    Oshchepkova, E. A., Omelyanchuk, N. A., Savina, M. S., Pasternak, T., Kolchanov, N. A. & Zemlyanskaya, E. V., 1 Jun 2017, In: Russian Journal of Genetics: Applied Research. 7, 4, p. 404-420 17 p.

    Research output: Contribution to journal › Article › peer-review

  66. Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots

    Omelyanchuk, N. A., Wiebe, D. S., Novikova, D. D., Levitsky, V. G., Klimova, N., Gorelova, V., Weinholdt, C., Vasiliev, G. V., Zemlyanskaya, E. V., Kolchanov, N. A., Kochetov, A. V., Grosse, I. & Mironova, V. V., 30 May 2017, In: Scientific Reports. 7, 1, p. 2489 11 p., 2489.

    Research output: Contribution to journal › Article › peer-review

  67. Identification of residues of the archaeal RNA-binding Nip7 proteins specific to environmental conditions

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 1 Apr 2017, In: Journal of Bioinformatics and Computational Biology. 15, 2, p. 1650036 18 p., 1650036.

    Research output: Contribution to journal › Article › peer-review

  68. Status and prospects of marker-assisted and genomic plant breeding

    Kolchanov, N. A., Kochetov, A. V., Salina, E. A., Pershina, L. A., Khlestkina, E. K. & Shumny, V. K., 1 Mar 2017, In: Herald of the Russian Academy of Sciences. 87, 2, p. 125-131 7 p.

    Research output: Contribution to journal › Article › peer-review

  69. Dynamic properties of SOD1 mutants can predict survival time of patients carrying familial amyotrophic lateral sclerosis

    Alemasov, N. A., Ivanisenko, N. V., Medvedev, S. P., Zakian, S. M., Kolchanov, N. A. & Ivanisenko, V. A., 17 Feb 2017, In: Journal of Biomolecular Structure and Dynamics. 35, 3, p. 645-656 12 p.

    Research output: Contribution to journal › Article › peer-review

  70. Online resources on gene networks containing human and animal data

    Ignatieva, E. V., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 8, p. 895-902 8 p.

    Research output: Contribution to journal › Article › peer-review

  71. 2016

  72. Mechanical behavior of cells within a cell-based model of wheat leaf growth

    Zubairova, U., Nikolaev, S., Penenko, A., Podkolodnyy, N., Golushko, S., Afonnikov, D. & Kolchanov, N., 15 Dec 2016, In: Frontiers in Plant Science. 7, DECEMBER2016, 15 p., 1878.

    Research output: Contribution to journal › Article › peer-review

  73. 2015

  74. The evolution of Homo sapiens denisova and Homo sapiens neanderthalensis miRNA targeting genes in the prenatal and postnatal brain

    Gunbin, K. V., Afonnikov, D. A., Kolchanov, N. A., Derevianko, A. P. & Rogaev, E. I., 16 Dec 2015, In: BMC Genomics. 16, 13, S4.

    Research output: Contribution to journal › Article › peer-review

  75. Association of anxiety level with polymorphic variants of serotonin transporter gene in Russians and Tuvinians

    Savostyanov, A. N., Naumenko, V. S., Sinyakova, N. A., L’vova, M. N., Levin, E. A., Zaleshin, M. S., Kavay-ool, U. N., Mordvinov, V. A., Kolchanov, N. A. & Aftanas, L. I., 1 Nov 2015, In: Russian Journal of Genetics: Applied Research. 5, 6, p. 656-665 10 p.

    Research output: Contribution to journal › Article › peer-review

  76. Influence of serotonin transporter allele polymorphism on individual characteristics of cerebral hemodynamics in humans under the “Stop–Signal” experimental paradigm

    Petrovskiy, E. D., Savostyanov, A. N., Savelov, A. A., Naumenko, V. S., Sinyakova, N. A., Levin, E. A., Tamozhnikov, S. S., Tulupov, A. A., Mordvinov, V. A., Kolchanov, N. A. & Aftanas, L. I., 1 Nov 2015, In: Russian Journal of Genetics: Applied Research. 5, 6, p. 666-671 6 p.

    Research output: Contribution to journal › Article › peer-review

ID: 3455340