Metabolomic and gene networks approaches reveal the role of mitochondrial membrane proteins in response of human melanoma cells to THz radiation

Butikova, E. A., Basov, N. V., Rogachev, A. D., Gaisler, E. V., Ivanisenko, V. A., Demenkov, P. S., Makarova, A. L. A., Ivanisenko, T. V., Razumov, I. A., Kolomeyets, D. A., Cheresiz, S. V., Solovieva, O. I., Larionov, K. P., Sotnikova, Y. S., Patrushev, Y. V., Kolchanov, N. A., Pokrovsky, A. G., Vinokurov, N. A., Kanygin, V. V., Popik, V. M., & 1 othersShevchenko, O. A., Mar 2025, In: Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1870, 2, 159595.

Research output: Contribution to journal › Article › peer-review

AI-Assisted Identification of Primary and Secondary Metabolomic Markers for Postoperative Delirium

Ivanisenko, V. A., Rogachev, A. D., Makarova, A-L. A., Basov, N. V., Gaisler, E. V., Kuzmicheva, I. N., Demenkov, P. S., Venzel, A. S., Ivanisenko, T. V., Antropova, E. A., Kolchanov, N. A., Plesko, V. V., Moroz, G. B., Lomivorotov, V. V. & Pokrovsky, A. G., Nov 2024, In: International Journal of Molecular Sciences. 25, 21, 11847.

Research output: Contribution to journal › Article › peer-review

AtSNP_TATAdb: Candidate Molecular Markers of Plant Advantages Related to Single Nucleotide Polymorphisms within Proximal Promoters of Arabidopsis thaliana L.

Bogomolov, A., Zolotareva, K., Filonov, S., Chadaeva, I., Rasskazov, D., Sharypova, E., Podkolodnyy, N., Ponomarenko, P., Savinkova, L., Tverdokhleb, N., Khandaev, B., Kondratyuk, E., Podkolodnaya, O., Zemlyanskaya, E., Kolchanov, N. A. & Ponomarenko, M., Jan 2024, In: International Journal of Molecular Sciences. 25, 1, 607.

Research output: Contribution to journal › Article › peer-review

A concept of natural genome reconstruction. Part 2. Effect of extracellular double-stranded DNA fragments on hematopoietic stem cells: Effect of extracellular double-stranded DNA fragments on hematopoietic stem cells

Ruzanova, V. S., Oshikhmina, S. G., Proskurina, A. S., Ritter, G. S., Kirikovich, S. S., Levites, E. V., Efremov, Y. R., Karamysheva, T. V., Meschaninova, M. I., Mamaev, A. L., Taranov, O. S., Bogachev, A. S., Sidorov, S. V., Nikonov, S. D., Leplina, O. Y., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A., Dolgova, E. V. & Bogachev, S. S., 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 8, p. 993-1007 15 p.

Research output: Contribution to journal › Article › peer-review

Gene networks and metabolomic screening analysis revealed specific pathways of amino acid and acylcarnitine profile alterations in blood plasma of patients with Parkinson’s disease and vascular parkinsonism

Makarova, A. A., Melnikova, P. M., Rogachev, A. D., Demenkov, P. S., Ivanisenko, T. V., Predtechenskaya, E. V., Karmanov, S. Y., Koval, V. V., Pokrovsky, A. G., Lavrik, I. N., Kolchanov, N. A. & Ivanisenko, V. A., 2024, In: Вавиловский журнал генетики и селекции. 28, 8, p. 927-939 13 p.

Research output: Contribution to journal › Article › peer-review

Reconstruction and computational analysis of the microRNA regulation gene network in wheat drought response mechanisms

Kleshchev, M. A., Maltseva, A. V., Antropova, E. A., Demenkov, P. S., Ivanisenko, T. V., Orlov, Y. L., Chao, H., Chen, M., Kolchanov, N. A. & Ivanisenko, V. A., 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 8, p. 904-917 14 p.

Research output: Contribution to journal › Article › peer-review

Stimulation of mouse hematopoietic stem cells by angiogenin and DNA preparations

Potter, E. A., Dolgova, E. V., Proskurina, A. S., Ruzanova, V. S., Efremov, Y. R., Kirikovich, S. S., Oshikhmina, S. G., Mamaev, A. L., Taranov, O. S., Bryukhovetskiy, A. S., Grivtsova, L. U., Kolchanov, N. A., Ostanin, A. A., Chernykh, E. R. & Bogachev, S. S., 2024, In: Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas. 57, e13072.

Research output: Contribution to journal › Article › peer-review

Gene networks for use in metabolomic data analysis of blood plasma from patients with postoperative delirium

Ivanisenko, V. A., Basov, N. V., Makarova, A. A., Venzel, A. S., Rogachev, A. D., Demenkov, P. S., Ivanisenko, T. V., Kleshchev, M. A., Gaisler, E. V., Moroz, G. B., Plesko, V. V., Sotnikova, Y. S., Patrushev, Y. V., Lomivorotov, V. V., Kolchanov, N. A. & Pokrovsky, A. G., Dec 2023, In: Vavilovskii Zhurnal Genetiki i Selektsii. 27, 7, p. 768-775 8 p.

Research output: Contribution to journal › Article › peer-review

Reconstruction and analysis of the gene regulatory network for cell wall function in Arabidopsis thaliana L. leaves in response to water deficit

Volyanskaya, A. R., Antropova, E. A., Zubairova, U. S., Demenkov, P. S., Venzel, A. S., Orlov, Y. L., Makarova, A. A., Ivanisenko, T. V., Gorshkova, T. A., Aglyamova, A. R., Kolchanov, N. A., Chen, M. & Ivanisenko, V. A., Dec 2023, In: Vavilovskii Zhurnal Genetiki i Selektsii. 27, 8, p. 1031-1041 11 p.

Research output: Contribution to journal › Article › peer-review

BGRS: bioinformatics of genome regulation and data integration

Orlov, Y. L., Chen, M., Kolchanov, N. A. & Hofestädt, R., 1 Sept 2023, In: Journal of integrative bioinformatics. 20, 3, 20230032.

Research output: Contribution to journal › Article › peer-review