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  1. 2024

  2. A non-canonical nucleotide from viral genomes interferes with the oxidative DNA damage repair system

    Yudkina, A. V., Endutkin, A. V., Diatlova, E. A. & Zharkov, D. O., Jan 2024, In: DNA Repair. 133, 8 p., 103605.

    Research output: Contribution to journal › Article › peer-review

  3. Back-Up Base Excision DNA Repair in Human Cells Deficient in the Major AP Endonuclease, APE1

    Kim, D. V., Diatlova, E. A., Zharkov, T. D., Melentyev, V. S., Yudkina, A. V., Endutkin, A. V. & Zharkov, D. O., Jan 2024, In: International Journal of Molecular Sciences. 25, 1, 64.

    Research output: Contribution to journal › Article › peer-review

  4. Coordination between human DNA polymerase β and apurinic/apyrimidinic endonuclease 1 in the course of DNA repair

    Bakman, A. S., Boichenko, S. S., Kuznetsova, A. A., Ishchenko, A. A., Saparbaev, M. & Kuznetsov, N. A., Jan 2024, In: Biochimie. 216, p. 126-136 11 p.

    Research output: Contribution to journal › Article › peer-review

  5. The Effectiveness of Co-Inoculation by Consortia of Microorganisms Depends on the Type of Plant and the Soil Microbiome

    Sokolova, E. A., Mishukova, O. V., Hlistun, I. V., Tromenschleger, I. N., Tikunov, A. Y., Manakhov, A. D., Rogaev, E. I., Savenkov, O. A., Buyanova, M. D., Ivanov, I. V., Smirnova, N. V. & Voronina, E. N., Jan 2024, In: Plants. 13, 1, 116.

    Research output: Contribution to journal › Article › peer-review

  6. Bacteriophage Treatment of Infected Diabetic Foot Ulcers

    Morozova, V. V., Kozlova, Y. N., Ganichev, D. A. & Tikunova, N. V., 2024, Methods in Molecular Biology. Azeredo, J. & Sillankorva, S. (eds.). 2 ed. Humana Press, Vol. 2734. p. 197-205 9 p. (Methods in Molecular Biology; vol. 2734).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  7. Robust and Reproducible Protocol for Phage Genome "Rebooting" Using Transformation-Associated Recombination (TAR) Cloning into Yeast Centromeric Plasmid

    Baykov, I., Kurchenko, O., Mikhaylova, E., Morozova, V. V. & Tikunova, N. V., 2024, Methods in Molecular Biology. Azeredo, J. & Sillankorva, S. (eds.). 2 ed. Humana Press, Vol. 2734. p. 301-317 17 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  8. Successful Use of Phage and Antibiotics Therapy for the Eradication of Two Bacterial Pathogens from the Respiratory Tract of an Infant

    Morozova, V. V., Kozlova, Y. N. & Tikunova, N. V., 2024, Methods in Molecular Biology. Azeredo, J. & Sillankorva, S. (eds.). 2 ed. Humana Press, Vol. 2734. p. 237-243 7 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  9. 2023

  10. Expanding the list of sequence-agnostic enzymes for chromatin conformation capture assays with S1 nuclease

    Maria, G., Andrey, P., Artem, S., Nikita, T., Andrey, K., Evgeny, K., Oxana, R., Maxim, F. & Veniamin, F., 11 Dec 2023, In: Epigenetics & chromatin. 16, 1, 13 p., 48.

    Research output: Contribution to journal › Article › peer-review

  11. Exosomal Cargo in Ovarian Cancer Dissemination

    Dzhugashvili, E. & Tamkovich, S., 7 Dec 2023, In: Current issues in molecular biology. 45, 12, p. 9851-9867 17 p.

    Research output: Contribution to journal › Review article › peer-review

  12. A New Human Uveal Melanoma Cell Line: Melanin Production and Molecular Markers for Targeted Therapy

    Zhilnikova, M. V., Novak, D. D., Troitskaya, O. S., Nushtaeva, A. A., Biryukov, M. M., Zvereva, S. P., Varlamov, M. E., Koval, V. V., Stanishevskaya, O. M., Chernikh, D. V., Kononova, N. V., Atamanov, V. V. & Koval, O. A., Dec 2023, In: Biochemistry (Moscow) Supplement Series B: Biomedical Chemistry. 17, 4, p. 165-171 7 p.

    Research output: Contribution to journal › Article › peer-review

  13. A Novel Podophage StenR_269 Suggests a New Family in the Class Caudoviricetes

    Yakubovskij, V. I., Morozova, V. V., Kozlova, Y. N., Tikunov, A. Y., Babkin, I. V., Bardasheva, A. V., Zhirakovskaya, E. V., Baykov, I. K., Kaverina, G. B. & Tikunova, N. V., Dec 2023, In: Viruses. 15, 12, 2437.

    Research output: Contribution to journal › Article › peer-review

  14. Blood Plasma Circulating DNA-Protein Complexes: Involvement in Carcinogenesis and Prospects for Liquid Biopsy of Breast Cancer

    Shefer, A., Tutanov, O., Belenikin, M., Tsentalovich, Y. P. & Tamkovich, S., Dec 2023, In: Journal of Personalized Medicine. 13, 12, 1691.

    Research output: Contribution to journal › Article › peer-review

  15. Hydrolysis of Oligodeoxyribonucleotides on the Microarray Surface and in Solution by Catalytic Anti-DNA Antibodies in Systemic Lupus Erythematosus

    Novikova, T. S., Ermakov, E. A., Kostina, E. V., Sinyakov, A. N., Sizikov, A. E., Nevinsky, G. A. & Buneva, V. N., Dec 2023, In: Current issues in molecular biology. 45, 12, p. 9887-9903 17 p.

    Research output: Contribution to journal › Article › peer-review

  16. Plant Growth-Promoting Bacteria of Soil: Designing of Consortia Beneficial for Crop Production

    Timofeeva, A. M., Galyamova, M. R. & Sedykh, S. E., Dec 2023, In: Microorganisms. 11, 12, 2864.

    Research output: Contribution to journal › Review article › peer-review

  17. Plant Growth-Promoting Soil Bacteria: Nitrogen Fixation, Phosphate Solubilization, Siderophore Production, and Other Biological Activities

    Timofeeva, A. M., Галямова, М. Р. & Sedykh, S. E., Dec 2023, In: Plants. 12, 24, 4074.

    Research output: Contribution to journal › Review article › peer-review

  18. Self-Penetrating Oligonucleotide Derivatives: Features of Self-Assembly and Interactions with Serum and Intracellular Proteins

    Bauer, I., Ilina, E., Zharkov, T., Grigorieva, E., Chinak, O., Kupryushkin, M., Golyshev, V., Mitin, D., Chubarov, A., Khodyreva, S. & Dmitrienko, E., Dec 2023, In: Pharmaceutics. 15, 12, 2779.

    Research output: Contribution to journal › Article › peer-review

  19. Pharmacokinetic study of Tdp1 inhibitor resulted in a significant increase in antitumor effect in the treatment of Lewis lung carcinoma in mice by its combination with topotecan

    Okhina, A. A., Kornienko, T. E., Rogachev, A. D., Luzina, O. A., Popova, N. A., Nikolin, V. P., Zakharenko, A. L., Dyrkheeva, N. S., Pokrovsky, A. G., Salakhutdinov, N. F. & Lavrik, O. I., 30 Nov 2023, In: Journal of Pharmaceutical and Biomedical Analysis. 236, 9 p., 115731.

    Research output: Contribution to journal › Article › peer-review

  20. Cas9 is mostly orthogonal to human systems of DNA break sensing and repair

    Maltseva, E. A., Vasil'eva, I. A., Moor, N. A., Kim, D. V., Dyrkheeva, N. S., Kutuzov, M. M., Vokhtantsev, I. P., Kulishova, L. M., Zharkov, D. O. & Lavrik, O. I., 29 Nov 2023, In: PLoS ONE. 18, 11, 26 p., e0294683.

    Research output: Contribution to journal › Article › peer-review

  21. Integration of fluorescence in situ hybridization and chromosome-length genome assemblies revealed synteny map for guinea pig, naked mole-rat, and human

    Romanenko, S. A., Kliver, S. F., Serdyukova, N. A., Perelman, P. L., Trifonov, V. A., Seluanov, A., Gorbunova, V., Azpurua, J., Pereira, J. C., Ferguson-Smith, M. A. & Graphodatsky, A. S., 29 Nov 2023, In: Scientific Reports. 13, 1, 12 p., 21055.

    Research output: Contribution to journal › Article › peer-review

  22. BRACNAC: A BRCA1 and BRCA2 Copy Number Alteration Caller from Next-Generation Sequencing Data

    Kechin, A., Boyarskikh, U., Borobova, V., Khrapov, E., Subbotin, S. & Filipenko, M., 22 Nov 2023, In: International Journal of Molecular Sciences. 24, 23, 16630.

    Research output: Contribution to journal › Article › peer-review

  23. The Molecular Basis for Selectivity of the Cytotoxic Response of Lung Adenocarcinoma Cells to Cold Atmospheric Plasma

    Biryukov, M., Semenov, D., Kryachkova, N., Polyakova, A., Patrakova, E., Troitskaya, O., Milakhina, E., Poletaeva, J., Gugin, P., Ryabchikova, E., Zakrevsky, D., Schweigert, I. & Koval, O., 20 Nov 2023, In: Biomolecules. 13, 11, 1672.

    Research output: Contribution to journal › Article › peer-review

  24. A comparative investigation of equimolar Ni-, Ru-, Rh- and Pt-based composite structured catalysts for energy-efficient methane reforming

    Ruban, N. V., Rogozhnikov, V. N., Stonkus, O. A., Emelyanov, V. A., Pakharukova, V. P., Svintsitskiy, D. A., Zazhigalov, S. V., Zagoruiko, A. N., Snytnikov, P. V., Sobyanin, V. A. & Potemkin, D. I., 15 Nov 2023, In: Fuel. 352, 14 p., 128973.

    Research output: Contribution to journal › Article › peer-review

  25. Methods for Assessment of Nucleotide Excision Repair Efficiency

    Popov, A. A., Petruseva, I. O., Naumenko, N. V. & Lavrik, O. I., Nov 2023, In: Biochemistry (Moscow). 88, 11, p. 1844-1856 13 p.

    Research output: Contribution to journal › Review article › peer-review

  26. Response of PRIMPOL-Knockout Human Lung Adenocarcinoma A549 Cells to Genotoxic Stress

    Gromova, A. S., Boldinova, E. O., Kim, D. V., Chuprov-Netochin, R. N., Leonov, S. V., Pustovalova, M. V., Zharkov, D. O. & Makarova, A. V., Nov 2023, In: Biochemistry (Moscow). 88, 11, p. 1933-1943 11 p.

    Research output: Contribution to journal › Article › peer-review

  27. FUS RRM regulates poly(ADP-ribose) levels after transcriptional arrest and PARP-1 activation on DNA damage

    Mamontova, E. M., Clément, M-J., Sukhanova, M. V., Joshi, V., Bouhss, A., Rengifo-Gonzalez, J. C., Desforges, B., Hamon, L., Lavrik, O. I. & Pastré, D., 31 Oct 2023, In: Cell Reports. 42, 10, 25 p., 113199.

    Research output: Contribution to journal › Article › peer-review

  28. Genomes of a Novel Group of Phages That Use Alternative Genetic Code Found in Human Gut Viromes

    Babkin, I., Tikunov, A., Morozova, V., Matveev, A., Morozov, V. V. & Tikunova, N., 18 Oct 2023, In: International Journal of Molecular Sciences. 24, 20, 15302.

    Research output: Contribution to journal › Article › peer-review

  29. Bioinformatic Analysis Reveals the Role of Translation Elongation Efficiency Optimisation in the Evolution of Ralstonia Genus

    Korenskaia, A. Y., Matushkin, Y. G., Mustafin, Z. S., Lashin, S. A. & Klimenko, A. I., Oct 2023, In: Biology. 12, 10, 1338.

    Research output: Contribution to journal › Article › peer-review

  30. Historical Aspects of Restriction Endonucleases as Intelligent Scissors for Genetic Engineering

    Alekseeva, I. V. & Kuznetsov, N. A., Oct 2023, In: Fermentation. 9, 10, 874.

    Research output: Contribution to journal › Article › peer-review

  31. Nickel-Based Ni–Ce1–xZrxO2 Catalysts Prepared by the Pechini Method for CO2 Methanation

    Pakharukova, V. P., Stonkus, O. A., Kharchenko, N. A., Rogozhnikov, V. N., Chesalov, Y. A., Gorlova, A. M., Saraev, A. A. & Potemkin, D. I., Oct 2023, In: Kinetics and Catalysis. 64, 5, p. 671-682 12 p.

    Research output: Contribution to journal › Article › peer-review

  32. Direct Enzyme Engineering of B Family DNA Polymerases for Biotechnological Approaches

    Kuznetsova, A. A. & Kuznetsov, N. A., 30 Sept 2023, In: Bioengineering (Basel, Switzerland). 10, 10, 1150.

    Research output: Contribution to journal › Review article › peer-review

  33. Base Excision DNA Repair in Plants: Arabidopsis and Beyond

    Grin, I. R., Petrova, D. V., Endutkin, A. V., Ma, C., Yu, B., Li, H. & Zharkov, D. O., 29 Sept 2023, In: International Journal of Molecular Sciences. 24, 19, 14746.

    Research output: Contribution to journal › Review article › peer-review

  34. Identification of Antibody-Mediated Hydrolysis Sites of Oligopeptides Corresponding to the SARS-CoV-2 S-Protein by MALDI-TOF Mass Spectrometry

    Timofeeva, A. M., Sedykh, S. E., Dmitrenok, P. S. & Nevinsky, G. A., 20 Sept 2023, In: International Journal of Molecular Sciences. 24, 18, 14342.

    Research output: Contribution to journal › Article › peer-review

  35. Natural Antibodies Produced in Vaccinated Patients and COVID-19 Convalescents Recognize and Hydrolyze Oligopeptides Corresponding to the S-Protein of SARS-CoV-2

    Timofeeva, A. M., Sedykh, S. E., Sedykh, T. A. & Nevinsky, G. A., 15 Sept 2023, In: Vaccines. 11, 9, 1494.

    Research output: Contribution to journal › Article › peer-review

  36. Conformational Dynamics of Biopolymers in the Course of Their Interaction: Multifaceted Approaches to the Analysis by the Stopped-Flow Technique with Fluorescence Detection

    Kuznetsov, N. A., Sept 2023, In: Photonics. 10, 9, 1033.

    Research output: Contribution to journal › Article › peer-review

  37. Novel B-Cell Epitopes of Non-Neutralizing Antibodies in the Receptor-Binding Domain of the SARS-CoV-2 S-Protein with Different Effects on the Severity of COVID-19

    Matveev, A. L., Pyankov, O. V., Khlusevich, Y. A., Tyazhelkova, O. V., Emelyanova, L. A., Timofeeva, A. M., Shipovalov, A. V., Chechushkov, A. V., Zaitseva, N. S., Kudrov, G. A., Yusubalieva, G. M., Yussubaliyeva, S. M., Zhukova, O. A., Tikunov, A. Y., Baklaushev, V. P., Sedykh, S. E., Lifshits, G. I. & Tikunova, N. V., Sept 2023, In: Biochemistry (Moscow). 88, 9, p. 1205-1214 10 p.

    Research output: Contribution to journal › Article › peer-review

  38. Applicability of Diagnostic Criteria and High Prevalence of Familial Dysbetalipoproteinemia in Russia: A Pilot Study

    Blokhina, A. V., Ershova, A. I., Kiseleva, A. V., Sotnikova, E. A., Zharikova, A. A., Zaicenoka, M., Vyatkin, Y. V., Ramensky, V. E., Kutsenko, V. A., Shalnova, S. A., Meshkov, A. N. & Drapkina, O. M., 24 Aug 2023, In: International Journal of Molecular Sciences. 24, 17, 13159.

    Research output: Contribution to journal › Article › peer-review

  39. Renaming of genera Ebolavirus and Marburgvirus to Orthoebolavirus and Orthomarburgvirus, respectively, and introduction of binomial species names within family Filoviridae

    Biedenkopf, N., Bukreyev, A., Chandran, K., Di Paola, N., Formenty, P. B. H., Griffiths, A., Hume, A. J., Mühlberger, E., Netesov, S. V., Palacios, G., Pawęska, J. T., Smither, S., Takada, A., Wahl, V. & Kuhn, J. H., 3 Aug 2023, In: Archives of Virology. 168, 8, 6 p., 220.

    Research output: Contribution to journal › Article › peer-review

  40. Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)

    ICTV Report Consortium & Нетёсов, С. В., 1 Aug 2023, In: Journal of General Virology. 104, 8, 55 p.

    Research output: Contribution to journal › Article › peer-review

  41. Alternative Mechanisms of Mutagenesis at mCpG Sites during Replication and Repair

    Shilkin, E. S., Petrova, D. V., Zharkov, D. O. & Makarova, A. V., Aug 2023, In: Molecular Biology. 57, 4, p. 584-592 9 p.

    Research output: Contribution to journal › Article › peer-review

  42. Ceria–Zirconia Supported Platinum Catalysts for the Water-Gas Shift Reaction: The Influence of Support Composition

    Gorlova, A. M., Pakharukova, V. P., Stonkus, O. A., Rogozhnikov, V. N., Gladky, A. Y., Snytnikov, P. V. & Potemkin, D. I., Aug 2023, In: Kinetics and Catalysis. 64, 4, p. 449-457 9 p.

    Research output: Contribution to journal › Article › peer-review

  43. Structure of an Ice-Binding Protein from Myoxocephalus octodecemspinosus Determined by Molecular Dynamics and Based on Circular Dichroism Spectra

    Oleinik, G. A., Zhdanova, P., Koval, V. V., Chernonosov, A. A. & Baranova, S. V., Aug 2023, In: Biophysics (Russian Federation). 68, 4, p. 513-518 6 p., 2.

    Research output: Contribution to journal › Article › peer-review

  44. Vertical Distribution of Communities of Epiphytic Myxomycetes on Woody Introduced Plants in Siberia

    Vlasenko, A. V., Tomoshevich, M. A. & Chelobanov, B. P., Aug 2023, In: Contemporary Problems of Ecology. 16, 4, p. 466-478 13 p.

    Research output: Contribution to journal › Article › peer-review

  45. Metal-oxide catalysts for CO TOX and PROX processes in the Pt–Cr/Mo/W systems

    Lagunova, V., Filatov, E., Plyusnin, P., Kostin, G., Urlukov, A., Potemkin, D. & Korenev, S., 29 Jul 2023, In: International Journal of Hydrogen Energy. 48, 64, p. 25133-25143 11 p.

    Research output: Contribution to journal › Article › peer-review

  46. Inner Amino Acid Contacts Are Key Factors of Multistage Structural Rearrangements of DNA and Affect Substrate Specificity of Apurinic/Apyrimidinic Endonuclease APE1

    Bulygin, A. A., Syryamina, V. N., Kuznetsova, A. A., Novopashina, D. S., Dzuba, S. A. & Kuznetsov, N. A., 14 Jul 2023, In: International Journal of Molecular Sciences. 24, 14, 11474.

    Research output: Contribution to journal › Article › peer-review

  47. Individual Contributions of Amido Acid Residues Tyr122, Ile168, and Asp173 to the Activity and Substrate Specificity of Human DNA Dioxygenase ABH2

    Davletgildeeva, A. T., Tyugashev, T. E., Zhao, M., Kuznetsov, N. A., Ishchenko, A. A., Saparbaev, M. & Kuznetsova, A. A., 13 Jul 2023, In: Cells. 12, 14, 1839.

    Research output: Contribution to journal › Article › peer-review

  48. Double oxalates of Rh(III) with Ni(II) and Co(II) – Effective precursors of nanoalloys for hydrocarbons steam reforming

    Zadesenets, A. V., Garkul, I. A., Filatov, E. Y., Sukhikh, A. S., Plusnin, P. E., Urlukov, A. S., Uskov, S. I., Potemkin, D. I. & Korenev, S. V., 12 Jul 2023, In: International Journal of Hydrogen Energy. 48, 59, p. 22428-22438 11 p.

    Research output: Contribution to journal › Article › peer-review

  49. Abasic site-peptide cross-links are blocking lesions repaired by AP endonucleases

    Yudkina, A. V., Bulgakov, N. A., Kim, D. V., Baranova, S. V., Ishchenko, A. A., Saparbaev, M. K., Koval, V. V. & Zharkov, D. O., 7 Jul 2023, In: Nucleic Acids Research. 51, 12, p. 6321-6336 16 p., gkad423.

    Research output: Contribution to journal › Article › peer-review

  50. Cloning, Expression, and Characterization of Family A DNA Polymerase from Massilia aurea

    Kuznetsova, A. A., Bedritskikh, K. S., Bulygin, A. A. & Kuznetsov, N. A., Jul 2023, In: Fermentation. 9, 7, 650.

    Research output: Contribution to journal › Article › peer-review

  51. Bypass of Abasic Site-Peptide Cross-Links by Human Repair and Translesion DNA Polymerases

    Yudkina, A. V., Barmatov, A. E., Bulgakov, N. A., Boldinova, E. O., Shilkin, E. S., Makarova, A. V. & Zharkov, D. O., 29 Jun 2023, In: International Journal of Molecular Sciences. 24, 13, 10877.

    Research output: Contribution to journal › Article › peer-review

  52. Antibodies Capable of Enhancing SARS-CoV-2 Infection Can Circulate in Patients with Severe COVID-19

    Matveev, A., Pyankov, O., Khlusevich, Y., Tyazhelkova, O., Emelyanova, L., Timofeeva, A., Shipovalov, A., Chechushkov, A., Zaitseva, N., Kudrov, G., Yusubalieva, G., Yussubaliyeva, S., Zhukova, O., Baklaushev, V., Sedykh, S., Lifshits, G., Tikunov, A. & Tikunova, N., 28 Jun 2023, In: International Journal of Molecular Sciences. 24, 13, 10799.

    Research output: Contribution to journal › Article › peer-review

  53. Milk Exosomes: Next-Generation Agents for Delivery of Anticancer Drugs and Therapeutic Nucleic Acids

    Timofeeva, A. M., Paramonik, A. P., Sedykh, S. S. & Nevinsky, G. A., 15 Jun 2023, In: International Journal of Molecular Sciences. 24, 12, 10194.

    Research output: Contribution to journal › Review article › peer-review

  54. Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet

    Wu, Z., Zhang, T., Li, J., Chen, S., Grin, I. R., Zharkov, D. O., Yu, B. & Li, H., 2 Jun 2023, In: Frontiers in Plant Science. 14, 1185440.

    Research output: Contribution to journal › Article › peer-review

  55. Cytotoxic Activity of a Cold Atmospheric Plasma Jet in Relation to a 3D Cell Model of Human Breast Cancer

    Patrakova, E. A., Biryukov, M. M., Troitskaya, O. S., Novak, D. D., Milakhina, E. V., Gugin, P. P., Zakrevsky, D. E., Schweigert, I. V. & Koval, O. A., Jun 2023, In: Cell and Tissue Biology. 17, 3, p. 233-246 14 p.

    Research output: Contribution to journal › Article › peer-review

  56. Monoclonal Antibody Panel for Hepatitis B Virus Genotype and HBsAg Subtype Identification: Results Obtained for Blood-Serum Samples from Three Regions of Russia

    Bezuglova, L. V., Sergeeva, E. I., Voevodskaya, L. Y., Lysykh, E. E., Polovitsa, N. V., Deliy, I. V., Ivanov, M. K., Netesova, I. G. & Netesov, S. V., Jun 2023, In: Molecular Genetics, Microbiology and Virology. 38, 2, p. 95-100 6 p.

    Research output: Contribution to journal › Article › peer-review

  57. Identification, Characterization, and Genome Analysis of Two Novel Temperate Pseudomonas protegens Phages PseuP_222 and PseuP_224

    Morozova, V., Kozlova, Y., Tikunov, A., Babkin, I., Ushakova, T., Bardasheva, A., Jdeed, G., Zhirakovskaya, E., Mogileva, A., Netesov, S. & Tikunova, N., 31 May 2023, In: Microorganisms. 11, 6, 1456.

    Research output: Contribution to journal › Article › peer-review

  58. The Impact of Human DNA Glycosylases on the Activity of DNA Polymerase β toward Various Base Excision Repair Intermediates

    Bakman, A. S., Boichenko, S. S., Kuznetsova, A. A., Ishchenko, A. A., Saparbaev, M. & Kuznetsov, N. A., 31 May 2023, In: International Journal of Molecular Sciences. 24, 11, 9594.

    Research output: Contribution to journal › Article › peer-review

  59. Correlated Target Search by Vaccinia Virus Uracil-DNA Glycosylase, a DNA Repair Enzyme and a Processivity Factor of Viral Replication Machinery

    Diatlova, E. A., Mechetin, G. V., Yudkina, A. V., Zharkov, V. D., Torgasheva, N. A., Endutkin, A. V., Shulenina, O. V., Konevega, A. L., Gileva, I. P., Shchelkunov, S. N. & Zharkov, D. O., 23 May 2023, In: International Journal of Molecular Sciences. 24, 11, 9113.

    Research output: Contribution to journal › Article › peer-review

  60. Association of Peripheral Inflammatory Biomarkers and Growth Factors Levels with Sex, Therapy and Other Clinical Factors in Schizophrenia and Patient Stratification Based on These Data

    Ermakov, E. A., Melamud, M. M., Boiko, A. S., Kamaeva, D. A., Ivanova, S. A., Nevinsky, G. A. & Buneva, V. N., 22 May 2023, In: Brain Sciences. 13, 5, 836.

    Research output: Contribution to journal › Article › peer-review

  61. The Activity of Natural Polymorphic Variants of Human DNA Polymerase β Having an Amino Acid Substitution in the Transferase Domain

    Kladova, O. A., Tyugashev, T. E., Mikushina, E. S., Kuznetsov, N. A., Novopashina, D. S. & Kuznetsova, A. A., 2 May 2023, In: Cells. 12, 9, 1300.

    Research output: Contribution to journal › Article › peer-review

  62. Differences in Transcriptomic Profiles of Brain and Thyroid Tumors with NTRK Gene Rearrangement

    Kechin, A. A., Koryukov, M. A., Smertina, M. A., Borobova, V. S., Oscorbin, I. P., Ivanov, A. A., Bakharev, S. Y., Boyarskikh, U. A., Kushlinskii, N. E. & Filipenko, M. L., May 2023, In: Bulletin of Experimental Biology and Medicine. 175, 1, p. 78-85 8 p.

    Research output: Contribution to journal › Article › peer-review

  63. The GJB2 (Cx26) Gene Variants in Patients with Hearing Impairment in the Baikal Lake Region (Russia)

    Pshennikova, V. G., Teryutin, F. M., Cherdonova, A. M., Borisova, T. V., Solovyev, A. V., Romanov, G. P., Morozov, I. V., Bondar, A. A., Posukh, O. L., Fedorova, S. A. & Barashkov, N. A., 28 Apr 2023, In: Genes. 14, 5, 1001.

    Research output: Contribution to journal › Article › peer-review

  64. The Composition of Small Extracellular Vesicles (sEVs) in the Blood Plasma of Colorectal Cancer Patients Reflects the Presence of Metabolic Syndrome and Correlates with Angiogenesis and the Effectiveness of Thermoradiation Therapy

    Yunusova, N. V., Svarovsky, D. A., Konovalov, A. I., Kostromitsky, D. N., Startseva, Z. A., Cheremisina, O. V., Afanas'ev, S. G., Kondakova, I. V., Grigor'eva, A. E., Vtorushin, S. V., Sereda, E. E., Usova, A. V. & Tamkovich, S. N., 19 Apr 2023, In: Journal of Personalized Medicine. 13, 4, 684.

    Research output: Contribution to journal › Article › peer-review

  65. Powder and structured Pt/Ce0.75Zr0.25O2-based catalysts: Water gas shift performance and quasi in situ XPS studies

    Gorlova, A. M., Panafidin, M. A., Shilov, V. A., Pakharukova, V. P., Snytnikov, P. V. & Potemkin, D. I., 15 Apr 2023, In: International Journal of Hydrogen Energy. 48, 32, p. 12015-12023 9 p.

    Research output: Contribution to journal › Article › peer-review

  66. Comparative Analysis of Molecular Functions and Biological Role of Proteins from Cell-Free DNA-Protein Complexes Circulating in Plasma of Healthy Females and Breast Cancer Patients

    Tutanov, O., Shefer, A., Tsentalovich, Y. & Tamkovich, S., 14 Apr 2023, In: International Journal of Molecular Sciences. 24, 8, 7279.

    Research output: Contribution to journal › Article › peer-review

  67. Activated Carbon-Enriched Electrospun-Produced Scaffolds for Drug Delivery/Release in Biological Systems

    Nazarkina, Z. K., Stepanova, A. O., Chelobanov, B. P., Kvon, R. I., Simonov, P. A., Karpenko, A. A. & Laktionov, P. P., 4 Apr 2023, In: International Journal of Molecular Sciences. 24, 7, 6713.

    Research output: Contribution to journal › Article › peer-review

  68. Activity of nsp14 Exonuclease from SARS-CoV-2 towards RNAs with Modified 3'-Termini

    Yuyukina, S. K., Barmatov, A. E., Bizyaev, S. N., Stetsenko, D. A., Sergeeva, O. V., Zatsepin, T. S. & Zharkov, D. O., Apr 2023, In: Doklady. Biochemistry and biophysics. 509, 1, p. 65-69 5 p.

    Research output: Contribution to journal › Article › peer-review

  69. Comparative Analysis of Family A DNA-Polymerases as a Searching Tool for Enzymes with New Properties

    Bulygin, A. A., Kuznetsova, A. A., Fedorova, O. S. & Kuznetsov, N. A., Apr 2023, In: Molecular Biology. 57, 2, p. 182-192 11 p.

    Research output: Contribution to journal › Article › peer-review

  70. DNA Probes for Analysis of the Activity of Key Enzymes of the Base Excision DNA Repair Pathway in Human Cells

    Alekseeva, I. V., Kuznetsova, A. A., Kladova, O. A., Shender, V. O., Schneider, P. V., Fedorova, O. S. & Kuznetsov, N. A., Apr 2023, In: Molecular Biology. 57, 2, p. 299-311 13 p.

    Research output: Contribution to journal › Article › peer-review

  71. Effect of Usnic Acid-Derived Tyrosyl-DNA Phosphodiesterase 1 Inhibitor Used as Monotherapy or in Combination with Olaparib on Transplanted Tumors In Vivo

    Kornienko, T. E., Zakharenko, A. L., Ilina, E. S., Chepanova, A. A., Zakharova, O. D., Dyrkheeva, N. S., Popova, N. A., Nikolin, V. P., Filimonov, A. S., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., Apr 2023, In: Molecular Biology. 57, 2, p. 214-224 11 p.

    Research output: Contribution to journal › Article › peer-review

  72. Factors Affecting the Stability of the Trimer of 2'-Deoxyuridine 5'-Triphosphate Nucleotide Hydrolase from Escherichia coli

    Yudkina, A. V., Kovalenko, E. A., Endutkin, A. V., Panferova, E. P., Kirilenko, A. A., Kokhanenko, A. A. & Zharkov, D. O., Apr 2023, In: Molecular Biology. 57, 2, p. 312-319 8 p.

    Research output: Contribution to journal › Article › peer-review

  73. Influence of the Poly(ADP-Ribose) Polymerase 1 Level on the Status of Base Excision Repair in Human Cells

    Ilina, E. S., Kochetkova, A. S., Belousova, E. A., Kutuzov, M. M., Lavrik, O. I. & Khodyreva, S. N., Apr 2023, In: Molecular Biology. 57, 2, p. 272-283 12 p.

    Research output: Contribution to journal › Article › peer-review

  74. Mechanisms of the Specificity of the CRISPR/Cas9 System in Genome Editing

    Kulishova, L. M., Vokhtantsev, I. P., Kim, D. V. & Zharkov, D. O., Apr 2023, In: Molecular Biology. 57, 2, p. 258-271 14 p.

    Research output: Contribution to journal › Article › peer-review

  75. Poly(ADP-Ribose) Polymerases 1 and 2: Classical Functions and Interaction with New Histone Poly(ADP-Ribosyl)ation Factor HPF1

    Kurgina, T. A. & Lavrik, O. I., Apr 2023, In: Molecular Biology. 57, 2, p. 245-257 13 p.

    Research output: Contribution to journal › Article › peer-review

  76. Regeneration of Rh/Ce0.75Zr0.25O2 – δ/θ-Al2O3/FeCrAl Catalyst after Autothermal Reforming of Diesel Fuel

    Shilov, V. A., Rogozhnikov, V. N., Potemkin, D. I. & Snytnikov, P. V., Apr 2023, In: Kinetics and Catalysis. 64, 2, p. 215-220 6 p.

    Research output: Contribution to journal › Article › peer-review

  77. Human Polβ Natural Polymorphic Variants G118V and R149I Affects Substate Binding and Catalysis

    Kladova, O. A., Tyugashev, T. E., Mikushina, E. S., Soloviev, N. O., Kuznetsov, N. A., Novopashina, D. S. & Kuznetsova, A. A., 20 Mar 2023, In: International Journal of Molecular Sciences. 24, 6, 5892.

    Research output: Contribution to journal › Article › peer-review

  78. Design of the New Closo-Dodecarborate-Containing Gemcitabine Analogue for the Albumin-Based Theranostics Composition

    Raskolupova, V. I., Wang, M., Dymova, M. A., Petrov, G. O., Shchudlo, I. M., Taskaev, S. Y., Abramova, T. V., Godovikova, T. S., Silnikov, V. N. & Popova, T. V., 15 Mar 2023, In: Molecules (Basel, Switzerland). 28, 6, 2672.

    Research output: Contribution to journal › Article › peer-review

  79. Dynamics of 8-Oxoguanine in DNA: Decisive Effects of Base Pairing and Nucleotide Context

    Ovcherenko, S. S., Shernyukov, A. V., Nasonov, D. M., Endutkin, A. V., Zharkov, D. O. & Bagryanskaya, E. G., 15 Mar 2023, In: Journal of the American Chemical Society. 145, 10, p. 5613-5617 5 p.

    Research output: Contribution to journal › Article › peer-review

  80. Transcriptomic Analysis of CRISPR/Cas9-Mediated PARP1-Knockout Cells under the Influence of Topotecan and TDP1 Inhibitor

    Dyrkheeva, N. S., Malakhova, A. A., Zakharenko, A. L., Okorokova, L. S., Shtokalo, D. N., Pavlova, S. V., Medvedev, S. P., Zakian, S. M., Nushtaeva, A. A., Tupikin, A. E., Kabilov, M. R., Khodyreva, S. N., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., 7 Mar 2023, In: International Journal of Molecular Sciences. 24, 6, 5148.

    Research output: Contribution to journal › Article › peer-review

  81. Влияние производного усниновой кислоты (ингибитора тирозил-ДНК-фосфодиэстеразы 1) на трансплантированные опухоли in vivo в качестве монотерапии и в сочетании с олапарибом

    Kornienko, T. E., Zakharenko, A. L., Ilina, E. S., Chepanova, A. A., Zakharova, O. D., Dyrkheeva, N. S., Popova, N. A., Nikolin, V. P., Filimonov, A. S., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., 1 Mar 2023, In: Molekuliarnaia biologiia. 57, 2, p. 220-231 12 p., 8.

    Research output: Contribution to journal › Article › peer-review

  82. Влияние уровня поли(ADP-рибоза)полимеразы 1 на статус системы эксцизионной репарации оснований в клетках человека

    Ilina, E. S., Kochetkova, A. S., Belousova, E. A., Kutuzov, M. M., Lavrik, O. I. & Khodyreva, S. N., 1 Mar 2023, In: Molekuliarnaia biologiia. 57, 2, p. 285-298 14 p., 13.

    Research output: Contribution to journal › Article › peer-review

  83. Поли(АDP-рибоза)полимеразы 1 и 2: классические функции и взаимодействие с HPF1 ‒ новым фактором поли(ADP-рибозил)ирования гистонов

    Kurgina, T. A. & Lavrik, O. I., 1 Mar 2023, In: Molekuliarnaia biologiia. 57, 2, p. 254-268 15 p., 11.

    Research output: Contribution to journal › Article › peer-review

  84. Разработка и апробация ДНК-зондов для определения активности ключевых ферментов пути эксцизионной репарации оснований ДНК в клетках человека

    Alekseeva, I. V., Kuznetsova, A. A., Kladova, O. A., Шендер, В. О., Шнайдер, П. В., Fedorova, O. S. & Kuznetsov, N. A., 1 Mar 2023, In: Molekuliarnaia biologiia. 57, 2, p. 316-329 14 p., 15.

    Research output: Contribution to journal › Article › peer-review

  85. Факторы, влияющие на стабильность тримерной формы 2'-дезоксиуридин-5'-трифосфатнуклеотидгидролазы Escherichia coli

    Yudkina, A. V., Kovalenko, E. A., Endutkin, A. V., Panferova, E. P., Kirilenko, A. A., Kokhanenko, A. A. & Zharkov, D. O., 1 Mar 2023, In: Molekuliarnaia biologiia. 57, 2, p. 330-339 10 p., 17.

    Research output: Contribution to journal › Article › peer-review

  86. Dataset for Spectroscopic, Structural and Dynamic Analysis of Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3

    Kanazhevskaya, L. Y., Gorbunov, A. A., Zhdanova, P. V. & Koval, V. V., Mar 2023, In: Data. 8, 3, 57.

    Research output: Contribution to journal › Article › peer-review

  87. Fluorescently labeled human apurinic/apyrimidinic endonuclease APE1 reveals effects of DNA polymerase β on the APE1-DNA interaction

    Bakman, A. S., Kuznetsova, A. A., Yanshole, L. V., Ishchenko, A. A., Saparbaev, M., Fedorova, O. S. & Kuznetsov, N. A., Mar 2023, In: DNA Repair. 123, 12 p., 103450.

    Research output: Contribution to journal › Article › peer-review

  88. Pan-cancer antagonistic inhibition pattern of ATM-driven G2/M checkpoint pathway vs other DNA repair pathways

    Zolotovskaia, M. A., Modestov, A. A., Suntsova, M. V., Rachkova, A. A., Koroleva, E. V., Poddubskaya, E. V., Sekacheva, M. I., Tkachev, V. S., Garazha, A. V., Glusker, A. A., Seryakov, A. P., Vladimirova, U. S., Rumiantsev, P. O., Moisseev, A. A., Zharkov, D. O., Kuzmin, D. V., Zhao, X., Prassolov, V. S., Shegay, P. V., Li, X., & 5 othersSteinbichler, T. B., Kim, E., Sorokin, M. I., Wang, Y. & Buzdin, A. A., Mar 2023, In: DNA Repair. 123, 18 p., 103448.

    Research output: Contribution to journal › Article › peer-review

  89. Novel TDP1 Inhibitors: Disubstituted Thiazolidine-2,4-Diones Containing Monoterpene Moieties

    Ivankin, D. I., Kornienko, T. E., Mikhailova, M. A., Dyrkheeva, N. S., Zakharenko, A. L., Achara, C., Reynisson, J., Golyshev, V. M., Luzina, O. A., Volcho, K. P., Salakhutdinov, N. F. & Lavrik, O. I., 14 Feb 2023, In: International Journal of Molecular Sciences. 24, 4, 3834.

    Research output: Contribution to journal › Article › peer-review

  90. Circulating Cell-Free DNA Levels in Psychiatric Diseases: A Systematic Review and Meta-Analysis

    Melamud, M. M., Buneva, V. N. & Ermakov, E. A., 8 Feb 2023, In: International Journal of Molecular Sciences. 24, 4, 3402.

    Research output: Contribution to journal › Review article › peer-review

  91. Synthesis and Study of the Catalytic Properties of a Structured Rh-Containing Catalyst for the Conversion of Diesel Fuel into Synthesis Gas

    Shilov, V. A., Rogozhnikov, V. N., Potemkin, D. I. & Snytnikov, P. V., Feb 2023, In: Kinetics and Catalysis. 64, 1, p. 96-104 9 p.

    Research output: Contribution to journal › Article › peer-review

  92. The Metagenomic Analysis of Viral Diversity in Colorado Potato Beetle Public NGS Data

    Starchevskaya, M., Kamanova, E., Vyatkin, Y., Tregubchak, T., Bauer, T., Bodnev, S., Rotskaya, U., Polenogova, O., Kryukov, V. & Antonets, D., 30 Jan 2023, In: Viruses. 15, 2, 395.

    Research output: Contribution to journal › Article › peer-review

  93. "Pulsed Hypoxia" Gradually Reprograms Breast Cancer Fibroblasts into Pro-Tumorigenic Cells via Mesenchymal-Epithelial Transition

    Nushtaeva, A., Ermakov, M., Abdurakhmanova, M., Troitskaya, O., Belovezhets, T., Varlamov, M., Gayner, T., Richter, V. & Koval, O., 27 Jan 2023, In: International Journal of Molecular Sciences. 24, 3, 2494.

    Research output: Contribution to journal › Article › peer-review

  94. Chloroquine Enhances Death in Lung Adenocarcinoma A549 Cells Exposed to Cold Atmospheric Plasma Jet

    Patrakova, E., Biryukov, M., Troitskaya, O., Gugin, P., Milakhina, E., Semenov, D., Poletaeva, J., Ryabchikova, E., Novak, D., Kryachkova, N., Polyakova, A., Zhilnikova, M., Zakrevsky, D., Schweigert, I. & Koval, O., 12 Jan 2023, In: Cells. 12, 2, 290.

    Research output: Contribution to journal › Article › peer-review

  95. Trait-Based Method of Quantitative Assessment of Ecological Functional Groups in the Human Intestinal Microbiome

    Kropochev, A. I., Lashin, S. A., Matushkin, Y. G. & Klimenko, A. I., 11 Jan 2023, In: Biology. 12, 1, 115.

    Research output: Contribution to journal › Article › peer-review

  96. Recent Advances in Structured Catalytic Materials Development for Conversion of Liquid Hydrocarbons into Synthesis Gas for Fuel Cell Power Generators

    Shilov, V., Potemkin, D., Rogozhnikov, V. & Snytnikov, P., 8 Jan 2023, In: Materials. 16, 2, 599.

    Research output: Contribution to journal › Review article › peer-review

  97. Development of Oncolytic Vectors Based on Human Adenovirus Type 6 for Cancer Treatment

    Osipov, I. D., Vasikhovskaia, V. A., Zabelina, D. S., Kutseikin, S. S., Grazhdantseva, A. A., Kochneva, G. V., Davydova, J., Netesov, S. V. & Romanenko, M. V., 7 Jan 2023, In: Viruses. 15, 1, 182.

    Research output: Contribution to journal › Article › peer-review

  98. DNA Damage Response and Repair in Boron Neutron Capture Therapy

    Mechetin, G. V. & Zharkov, D. O., 2 Jan 2023, In: Genes. 14, 1, 127.

    Research output: Contribution to journal › Review article › peer-review

  99. A spectrum of BRCA1 and BRCA2 germline deleterious variants in ovarian cancer in Russia

    Kechin, A., Boyarskikh, U., Barinov, A., Tanas, A., Kazakova, S., Zhevlova, A., Khrapov, E., Subbotin, S., Mishukova, O., Kekeeva, T., Demidova, I. & Filipenko, M., Jan 2023, In: Breast Cancer Research and Treatment. 197, 2, p. 387-395 9 p.

    Research output: Contribution to journal › Article › peer-review

  100. Comparative Analysis of Tumor-Associated microRNAs and Tetraspanines from Exosomes of Plasma and Ascitic Fluids of Ovarian Cancer Patients

    Yunusova, N., Dzhugashvili, E., Yalovaya, A., Kolomiets, L., Shefer, A., Grigor'eva, A., Tupikin, A., Kondakova, I. & Tamkovich, S., Jan 2023, In: International Journal of Molecular Sciences. 24, 1, 464.

    Research output: Contribution to journal › Article › peer-review

  101. The Lipophilic Purine Nucleoside-Tdp1 Inhibitor-Enhances DNA Damage Induced by Topotecan In Vitro and Potentiates the Antitumor Effect of Topotecan In Vivo

    Chernyshova, I. A., Zakharenko, A. L., Kurochkin, N. N., Dyrkheeva, N. S., Kornienko, T. E., Popova, N. A., Nikolin, V. P., Ilina, E. S., Zharkov, T. D., Kupryushkin, M. S., Oslovsky, V. E., Drenichev, M. S. & Lavrik, O. I., Jan 2023, In: Molecules (Basel, Switzerland). 28, 1, 323.

    Research output: Contribution to journal › Article › peer-review

  102. Analysis of methods for loading therapeutic nucleic acids into horse milk exosomes

    Парамоник, А. П., Седых, С. Е., Timofeeva, A. & Невинский, Г. А., 2023, In: FEBS Open Bio. 13, 2, p. 228 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

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