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  1. 2022

  2. Plasma metabolomics and gene regulatory networks analysis reveal the role of nonstructural SARS-CoV-2 viral proteins in metabolic dysregulation in COVID-19 patients

    Ivanisenko, V. A., Gaisler, E. V., Basov, N. V., Rogachev, A. D., Cheresiz, S. V., Ivanisenko, T. V., Demenkov, P. S., Mishchenko, E. L., Khripko, O. P., Khripko, Y. I., Voevoda, S. M., Karpenko, T. N., Velichko, A. J., Voevoda, M. I., Kolchanov, N. A. & Pokrovsky, A. G., Dec 2022, In: Scientific Reports. 12, 1, 12 p., 19977.

    Research output: Contribution to journal › Article › peer-review

  3. The New Version of the ANDDigest Tool with Improved AI-Based Short Names Recognition

    Ivanisenko, T. V., Demenkov, P. S., Kolchanov, N. A. & Ivanisenko, V. A., Dec 2022, In: International Journal of Molecular Sciences. 23, 23, 14934.

    Research output: Contribution to journal › Article › peer-review

  4. Chronic dust bronchitis: composition of the sputum bacterial microbiome and its association with chromosome damage in blood lymphocytes

    Druzhinin, V. G., Baranova, E. D., Demenkov, P. S., Matskova, L. V., Paradnikova, S. A., Volobaev, V. P. & Larionov, A. V., 2022, In: Ecological Genetics. 20, 4, p. 325-337 13 p.

    Research output: Contribution to journal › Article › peer-review

  5. Validation of preoperative diagnosis of malignant thyroid tumors using a molecular classifier

    Titov, S. E., Lukyanov, S. A., Kozorezova, E. S., Demenkov, P. S., Sergiyko, S. V., Veryaskina, Y. A., Vorobyov, S. L., Sleptsov, I. V. & Gostimsky, A. V., 2022, In: Voprosy Onkologii. 68, 6, p. 741-751 11 p.

    Research output: Contribution to journal › Article › peer-review

  6. 2021

  7. Prioritization of biological processes based on the reconstruction and analysis of associative gene networks describing the response of plants to adverse environmental factors

    Demenkov, P. S., Oshchepkova, E. A., Ivanisenko, T. V. & Ivanisenko, V. A., Sept 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 5, p. 580-592 13 p., 13.

    Research output: Contribution to journal › Article › peer-review

  8. База данных симптомов заболеваний, представленных в научных публикациях PubMed, для подсистемы отложенных консультаций информационной системы Университетской клиники

    Гайслер, Е. В., Деменков, П. С., Иванисенко, В. А., Иванисенко, Т. В. & Сайк, О. В., 19 Feb 2021, Роспатент - Федеральная служба по интеллектуальной собственности, Patent No. 2021620298, Priority date 5 Feb 2021, Priority No. 2021620147

    Research output: Patent › Database registration

  9. Preoperative Typing of Thyroid and Parathyroid Tumors with a Combined Molecular Classifier

    Titov, S. E., Kozorezova, E. S., Demenkov, P. S., Veryaskina, Y. A., Kuznetsova, I. V., Vorobyev, S. L., Chernikov, R. A., Sleptsov, I. V., Timofeeva, N. I. & Ivanov, M. K., 11 Jan 2021, In: Cancers. 13, 2, p. 1-17 17 p., 237.

    Research output: Contribution to journal › Article › peer-review

  10. The Web Platform for Storing Biotechnologically Significant Properties of Bacterial Strains

    Mukhin, A. M., Kazantsev, F. V., Klimenko, A. I., Lakhova, T. N., Demenkov, P. S. & Lashin, S. A., 2021, Parallel Computing Technologies - 16th International Conference, PaCT 2021, Proceedings. Malyshkin, V. (ed.). Springer, p. 445-450 6 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12942 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  11. 2020

  12. Preoperative detection of malignancy in fine-needle aspiration cytology (FNAC) smears with indeterminate cytology (Bethesda III, IV) by a combined molecular classifier

    Titov, S., Demenkov, P. S., Lukyanov, S. A., Sergiyko, S. V., Katanyan, G. A., Veryaskina, Y. A. & Ivanov, M. K., 1 Nov 2020, In: Journal of Clinical Pathology. 73, 11, p. 722-727 6 p.

    Research output: Contribution to journal › Article › peer-review

  13. ANDDigest: a new web-based module of ANDSystem for the search of knowledge in the scientific literature

    Ivanisenko, T. V., Saik, O. V., Demenkov, P. S., Ivanisenko, N. V., Savostianov, A. N. & Ivanisenko, V. A., 14 Sept 2020, In: BMC Bioinformatics. 21, Suppl 11, p. 228 21 p., 228.

    Research output: Contribution to journal › Article › peer-review

  14. 2019

  15. Combined quantitation of HMGA2 mRNA, microRNAs, and mitochondrial-DNA content enables the identification and typing of thyroid tumors in fine-needle aspiration smears

    Titov, S. E., Ivanov, M. K., Demenkov, P. S., Katanyan, G. A., Kozorezova, E. S., Malek, A. V., Veryaskina, Y. A. & Zhimulev, I. F., 28 Oct 2019, In: BMC Cancer. 19, 1, 1010.

    Research output: Contribution to journal › Article › peer-review

  16. Prioritization of genes involved in endothelial cell apoptosis by their implication in lymphedema using an analysis of associative gene networks with ANDSystem

    Saik, O. V., Nimaev, V. V., Usmonov, D. B., Demenkov, P. S., Ivanisenko, T. V., Lavrik, I. N. & Ivanisenko, V. A., 13 Mar 2019, In: BMC Medical Genomics. 12, Suppl 2, p. 47 15 p., 47.

    Research output: Contribution to journal › Article › peer-review

  17. A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression

    Ivanisenko, V. A., Demenkov, P. S., Ivanisenko, T. V., Mishchenko, E. L. & Saik, O. V., 5 Feb 2019, In: BMC Bioinformatics. 20, Suppl 1, 11 p., 34.

    Research output: Contribution to journal › Article › peer-review

  18. Prioritization of potato genes involved in the formation of agronomically valuable traits using the SOLANUM TUBEROSUM knowledge base

    Demenkov, P. S., Saik, O. V., Ivanisenko, T. V., Kolchanov, N. A., Kochetov, A. V. & Ivanisenko, V. A., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 312-319 8 p.

    Research output: Contribution to journal › Article › peer-review

  19. Web-Based Computational Tools for the Prediction and Analysis of Posttranslational Modifications of Proteins

    Ivanisenko, V. A., Ivanisenko, T. V., Saik, O. V., Demenkov, P. S., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2019, Methods in Molecular Biology. Humana Press, Vol. 1934. p. 1-20 20 p. (Methods in Molecular Biology; vol. 1934).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  20. 2017

  21. Development of methods for automatic extraction of knowledge from texts of scientific publications for the creation of a knowledge base solanum tuberosum

    Saik, O. V., Demenkov, P. S., Ivanisenko, T. V., Kolchanov, N. A. & Ivanisenko, V. A., 1 Jan 2017, In: Sel'skokhozyaistvennaya Biologiya. 52, 1, p. 63-74 12 p.

    Research output: Contribution to journal › Article › peer-review

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