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  1. 2020

  2. Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis

    Freire-Rios, A., Tanaka, K., Crespo, I., Van der Wijk, E., Sizentsova, Y., Levitsky, V., Lindhoud, S., Fontana, M., Hohlbein, J., Roeland Boer, D., Mironova, V. & Weijers, D., 29 Sept 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 39, p. 24557-24566 10 p.

    Research output: Contribution to journal › Article › peer-review

  3. Rocks in the auxin stream: Wound-induced auxin accumulation and ERF115 expression synergistically drive stem cell regeneration

    Canher, B., Heyman, J., Savina, M., Devendran, A., Eekhout, T., Vercauteren, I., Prinsen, E., Matosevich, R., Xu, J., Mironova, V. & de Veylder, L., 14 Jul 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 28, p. 16667-16677 11 p.

    Research output: Contribution to journal › Article › peer-review

  4. metaRE R package for meta-analysis of transcriptome data to identify the cis-regulatory code behind the transcriptional reprogramming

    Novikova, D. D., Cherenkov, P. A., Sizentsova, Y. G. & Mironova, V. V., 1 Jun 2020, In: Genes. 11, 6, p. 1-14 14 p., 634.

    Research output: Contribution to journal › Article › peer-review

  5. Specification and regulation of vascular tissue identity in the Arabidopsis embryo

    Smit, M. E., Llavata-Peris, C. I., Roosjen, M., van Beijnum, H., Novikova, D., Levitsky, V., Sevilem, I., Roszak, P., Slane, D., Jürgens, G., Mironova, V., Brady, S. M. & Weijers, D., 20 Apr 2020, In: Development (Cambridge). 147, 8, 15 p., dev186130.

    Research output: Contribution to journal › Article › peer-review

  6. Fold-change-specific enrichment analysis (FSEA): Quantification of transcriptional response magnitude for functional gene groups

    Wiebe, D. S., Omelyanchuk, N. A., Mukhin, A. M., Grosse, I., Lashin, S. A., Zemlyanskaya, E. V. & Mironova, V. V., 17 Apr 2020, In: Genes. 11, 4, 14 p., 434.

    Research output: Contribution to journal › Article › peer-review

  7. 3D Analysis of Mitosis Distribution Pattern in the Plant Root Tip with iRoCS Toolbox

    Lavrekha, V. V., Pasternak, T., Palme, K. & Mironova, V. V., 1 Jan 2020, In: Methods in molecular biology (Clifton, N.J.). 2094, p. 119-125 7 p.

    Research output: Contribution to journal › Article › peer-review

  8. PlantLayout pipeline to model tissue patterning

    Savina, M. S. & Mironova, V. V., 1 Jan 2020, In: Вавиловский журнал генетики и селекции. 24, 1, p. 102-107 6 p.

    Research output: Contribution to journal › Article › peer-review

  9. 2019

  10. A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package

    Levitsky, V., Zemlyanskaya, E., Oshchepkov, D., Podkolodnaya, O., Ignatieva, E., Grosse, I., Mironova, V. & Merkulova, T., 2 Dec 2019, In: Nucleic Acids Research. 47, 21, p. e139 14 p.

    Research output: Contribution to journal › Article › peer-review

  11. A single-cell view of tissue regeneration in plants

    Mironova, V. & Xu, J., Dec 2019, In: Current Opinion in Plant Biology. 52, p. 149-154 6 p.

    Research output: Contribution to journal › Review article › peer-review

  12. Salicylic Acid Affects Root Meristem Patterning via Auxin Distribution in a Concentration-Dependent Manner

    Pasternak, T., Groot, E. P., Kazantsev, F. V., Teale, W., Omelyanchuk, N., Kovrizhnykh, V., Palme, K. & Mironova, V. V., 1 Jul 2019, In: Plant Physiology. 180, 3, p. 1725-1739 15 p.

    Research output: Contribution to journal › Article › peer-review

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