1. 2022
  2. Recognition of a Clickable Abasic Site Analog by DNA Polymerases and DNA Repair Enzymes

    Endutkin, A. V., Yudkina, A. V., Zharkov, T. D., Kim, D. V. & Zharkov, D. O., Nov 2022, In: International Journal of Molecular Sciences. 23, 21, 13353.

    Research output: Contribution to journalArticlepeer-review

  3. Distinct Mechanisms of Target Search by Endonuclease VIII-like DNA Glycosylases

    Diatlova, E. A., Mechetin, G. V. & Zharkov, D. O., Oct 2022, In: Cells. 11, 20, 3192.

    Research output: Contribution to journalArticlepeer-review

  4. Mechanisms of Coronavirus Genome Stability As Potential Targets for Antiviral Drugs

    Yuyukina, S. K. & Zharkov, D. O., Aug 2022, In: Herald of the Russian Academy of Sciences. 92, 4, p. 470-478 9 p.

    Research output: Contribution to journalArticlepeer-review

  5. Noncatalytic Domains in DNA Glycosylases

    Torgasheva, N. A., Diatlova, E. A., Grin, I. R., Endutkin, A. V., Mechetin, G. V., Vokhtantsev, I. P., Yudkina, A. V. & Zharkov, D. O., 1 Jul 2022, In: International Journal of Molecular Sciences. 23, 13, 7286.

    Research output: Contribution to journalReview articlepeer-review

  6. Характеристика деметилирующей ДНК-гликозилазы ROS1 из Nicotiana tabacum L

    Петрова, Д. В., Пермякова, Н. В., Грин, И. Р. & Жарков, Д. О., Jul 2022, In: Вавиловский журнал генетики и селекции. 26, 4, p. 341-348 8 p., 1.

    Research output: Contribution to journalArticlepeer-review

  7. Механизмы обеспечения стабильности генома коронавирусов как потенциальные мишени для противовирусных средств

    Ююкина, С. К. & Жарков, Д. О., 14 Mar 2022, In: Вестник РАН. 92, 8, p. 737-746 10 p., 5.

    Research output: Contribution to journalArticlepeer-review

  8. Miscoding and DNA Polymerase Stalling by Methoxyamine-Adducted Abasic Sites

    Yudkina, A. V. & Zharkov, D. O., 21 Feb 2022, In: Chemical Research in Toxicology. 35, 2, p. 303-314 12 p.

    Research output: Contribution to journalArticlepeer-review

  9. A Low-Activity Polymorphic Variant of Human NEIL2 DNA Glycosylase

    Kakhkharova, Z. I., Zharkov, D. O. & Grin, I. R., 1 Feb 2022, In: International Journal of Molecular Sciences. 23, 4, 2212.

    Research output: Contribution to journalArticlepeer-review

  10. Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., Feb 2022, In: Data in Brief. 40, 107760.

    Research output: Contribution to journalArticlepeer-review

  11. Stalling of Eukaryotic Translesion DNA Polymerases at DNA-Protein Cross-Links

    Yudkina, A. V., Shilkin, E. S., Makarova, A. V. & Zharkov, D. O., Feb 2022, In: Genes. 13, 2, 166.

    Research output: Contribution to journalArticlepeer-review

  12. Dynamics and Conformational Changes in Human NEIL2 DNA Glycosylase Analyzed by Hydrogen/Deuterium Exchange Mass Spectrometry

    Zhdanova, P. V., Ishchenko, A. A., Chernonosov, A. A., Zharkov, D. O. & Koval, V. V., 30 Jan 2022, In: Journal of Molecular Biology. 434, 2, 167334.

    Research output: Contribution to journalArticlepeer-review

  13. Effect of DNA Methylation on the 3′→5′ Exonuclease Activity of Major Human Abasic Site Endonuclease APEX1

    Endutkin, A. V., Yatsenko, D. D. & Zharkov, D. O., Jan 2022, In: Biochemistry (Moscow). 87, 1, p. 10-20 11 p., 1.

    Research output: Contribution to journalArticlepeer-review

  14. Base excision repair in non-canonical DNA structures

    Дятлова, Е. А., Ерошенко, Д. А. & Жарков, Д. О., 2022, p. 977-978. 2 p.

    Research output: Contribution to conferenceAbstractpeer-review

  15. Bioorthogonality in the light of cell defense mechanisms: Interaction of non-natural nucleic acids with the base excision DNA repair system

    Ендуткин, А. В., Юдкина, А. В. & Жарков, Д. О., 2022, p. 982. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  16. Interaction of DNA replication and DNA repair systems with AP sites adducts with proteins, peptides and low-molecular-weight compounds

    Юдкина, А. В., Шилкин, Е. С., Болдинова, Е. О., Макарова, А. В., Дворникова, А. П., Булгаков, Н. А., Ким, Д. В. & Жарков, Д. О., 2022, p. 1026. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  17. Structure and function evolution in DNA repair

    Жарков, Д. О., 2022, p. 1027. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  18. Transcriptional mutagenesis-based reporter system for the analysis of DNA repair

    Ким, Д. В., Khobta, A. & Жарков, Д. О., 2022, p. 987. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  19. Влияние метилирования ДНК на 3′→5′-экзонуклеазную активность основной апурин-апиримидиновой эндонуклеазы человека APEX1

    Ендуткин, А. В., Яценко, Д. Д. & Жарков, Д. О., 2022, In: Биохимия. 87, 1, p. 3-15 13 p., 1.

    Research output: Contribution to journalArticlepeer-review

  20. Оптимизация экспрессии и тестирования активности ДНК-гликозилазы MUTYH млекопитающих

    Кручинин, А. А., Шилкин, Е. С., Жарков, Д. О. & Макарова, А. В., 2022, p. 125-126. 2 p.

    Research output: Contribution to conferenceAbstract

  21. 2021
  22. Translesion activity of PrimPol on DNA with cisplatin and DNA–protein cross-links

    Boldinova, E. O., Yudkina, A. V., Shilkin, E. S., Gagarinskaya, D. I., Baranovskiy, A. G., Tahirov, T. H., Zharkov, D. O. & Makarova, A. V., Dec 2021, In: Scientific Reports. 11, 1, 17588.

    Research output: Contribution to journalArticlepeer-review

  23. A New Class of Uracil-DNA Glycosylase Inhibitors Active against Human and Vaccinia Virus Enzyme

    Grin, I. R., Mechetin, G., Kasymov, R. D., Diatlova, E. A., Yudkina, A., Shchelkunov, S. N., Gileva, I. P., Denisova, A. A., Stepanov, G. A., Chilov, G. G. & Zharkov, D. O., 1 Nov 2021, In: Molecules. 26, 21, 15 p., 6668.

    Research output: Contribution to journalArticlepeer-review

  24. DNA glycosylases for 8-oxoguanine repair in Staphylococcus aureus

    Endutkin, A. V., Panferova, E. P., Barmatov, A. E. & Zharkov, D. O., Sept 2021, In: DNA Repair. 105, p. 103160 103160.

    Research output: Contribution to journalArticlepeer-review

  25. Mild phenotype of knockouts of the major apurinic/apyrimidinic endonuclease APEX1 in a non-cancer human cell line

    Kim, D. V., Kulishova, L. M., Torgasheva, N. A., Melentyev, V. S., Dianov, G. L., Medvedev, S. P., Zakian, S. M. & Zharkov, D. O., Sept 2021, In: PLoS ONE. 16, 9 September, e0257473.

    Research output: Contribution to journalArticlepeer-review

  26. Репарация ДНК: за пределами модельных микроорганизмов

    Жарков, Д. О., Sept 2021, p. 33. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  27. Структура новой атипичной ДНК-гликозилазы суперсемейства H2TH из Bacteroides thetaiotaomicron

    Юдкина, А. В., Гарсиа-Диаз, М. & Жарков, Д. О., Sept 2021, p. 286-287. 2 p.

    Research output: Contribution to conferenceAbstractpeer-review

  28. Урацил-ДНК-гликозилаза ортопоксвирусов как мишень для противовирусной терапии

    Дятлова, Е. А. & Жарков, Д. О., Sept 2021, p. 174-175. 2 p.

    Research output: Contribution to conferenceAbstractpeer-review

  29. Mild phenotype of knockouts of the major apurinic/apyrimidinic endonuclease APEX1 in a noncancer human cell line

    Ким, Д. В., Кулишова, Л. М., Торгашева, Н. А. & Жарков, Д. О., Aug 2021, p. 92. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  30. Miscoding properties of abasic site adducts with methoxyamine, an antitumor base excision repair inhibitor

    Yudkina, A., Shilkin, E., Boldinova, E., Makarova, A. & Zharkov, D., Jul 2021, In: FEBS Open Bio. 11, p. 87-87 1 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  31. Novel approach to the delivery into the cells and light-activation of the guide RNA for the genome editing CRISPR/Cas9 system

    Яковлев, А., Ахметова, Е., Данилин, Н. А., Семиколенова, О. А., Вохтанцев, И. П., Ким, Д. В., Жарков, Д. О., Веньяминова, А. Г. & Новопашина, Д. С., Jul 2021, p. 122. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  32. Evolutionary Origins of DNA Repair Pathways: Role of Oxygen Catastrophe in the Emergence of DNA Glycosylases

    Prorok, P., Grin, I. R., Matkarimov, B. T., Ishchenko, A. A., Laval, J., Zharkov, D. O. & Saparbaev, M., 24 Jun 2021, In: Cells. 10, 7, 1591.

    Research output: Contribution to journalReview articlepeer-review

  33. GO-система: путь репарации ДНК для борьбы с окислительными повреждениями

    Endutkin, A. V. & Zharkov, D. O., 20 Apr 2021, In: Molekuliarnaia biologiia. 55, 2, p. 223-242 20 p., 5.

    Research output: Contribution to journalReview articlepeer-review

  34. Изучение свойств рекомбинантной эндонуклеазы IV Mycobacterium tuberculosis

    Dymova, M. A., Endutkin, A. V., Polunovsky, V. V., Zakabunin, A. I., Khrapov, E. A., Torgasheva, N. A., Yudkina, A. V., Mechetin, G. V., Filipenko, M. L. & Zharkov, D. O., 20 Apr 2021, In: Molekuliarnaia biologiia. 55, 2, p. 258-268 11 p., 7.

    Research output: Contribution to journalArticlepeer-review

  35. Матричные свойства 5-метил-2'-дезоксицитидина и 5-гидроксиметил-2'-дезоксицитидина в реакциях с транслезионными и репаратичными ДНК-полимеразами человека

    Shilkin, E. S., Petrova, D. V., Poltorachenko, V. A., Boldinova, E. O., Zharkov, D. O. & Makarova, A. V., 1 Mar 2021, In: Molekuliarnaia biologiia. 55, 2, p. 305-311 7 p., 11.

    Research output: Contribution to journalArticlepeer-review

  36. Characterization of Recombinant Endonuclease IV from Mycobacterium tuberculosis

    Dymova, M. A., Endutkin, A. V., Polunovsky, V. V., Zakabunin, A. I., Khrapov, E. A., Torgasheva, N. A., Yudkina, A. V., Mechetin, G. V., Filipenko, M. L. & Zharkov, D. O., Mar 2021, In: Molecular Biology. 55, 2, p. 225-233 9 p.

    Research output: Contribution to journalArticlepeer-review

  37. GO System, a DNA Repair Pathway to Cope with Oxidative Damage

    Endutkin, A. V. & Zharkov, D. O., Mar 2021, In: Molecular Biology. 55, 2, p. 193-210 18 p.

    Research output: Contribution to journalReview articlepeer-review

  38. Template Properties of 5-Methyl-2'-Deoxycytidine and 5-Hydroxymethyl-2'-Deoxycytidine in Reactions with Human Translesion and Reparative DNA Polymerases

    Shilkin, E. S., Petrova, D. V., Poltorachenko, V. A., Boldinova, E. O., Zharkov, D. O. & Makarova, A. V., Mar 2021, In: Molecular Biology. 55, 2, p. 267-272 6 p.

    Research output: Contribution to journalArticlepeer-review

  39. Активность ДНК-полимераз х-семейства человека на метилированных ДНК-матрицах

    Хрячкова, А. Ю., Шилкин, Е. С., Петрова, Д. В., Жарков, Д. О. & Макарова, А. В., Feb 2021, p. 65. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  40. Ответ клеток аденокарциномы легких человека с нокаутом гена PRIMPOL на повреждения ДНК

    Громова, А. С., Болдинова, Е. О., Ким, Д. В., Чупров-Неточин, Р. Н., Жарков, Д. О. & Макарова, А. В., Feb 2021, p. 50. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  41. Molecular dynamics approach to identification of new OGG1 cancer-associated somatic variants with impaired activity

    Popov, A. V., Endutkin, A. V., Yatsenko, D. D., Yudkina, A. V., Barmatov, A. E., Makasheva, K. A., Raspopova, D. Y., Diatlova, E. A. & Zharkov, D. O., 1 Jan 2021, In: Journal of Biological Chemistry. 296, 100229.

    Research output: Contribution to journalArticlepeer-review

  42. Boron-containing nucleosides as tools for boron-neutron capture therapy

    Zharkov, D. O., Yudkina, A., Riesebeck, T., Loshchenova, P. S., Mostovich, E. A. & Dianov, G. L., 2021, In: American journal of cancer research. 11, 10, p. 4668-4682 15 p.

    Research output: Contribution to journalReview articlepeer-review

  43. 2020
  44. Displacement of Slow-Turnover DNA Glycosylases by Molecular Traffic on DNA

    Yudkina, A. V., Endutkin, A. V., Diatlova, E. A., Moor, N. A., Vokhtantsev, I. P., Grin, I. R. & Zharkov, D. O., Aug 2020, In: Genes. 11, 8, p. 1-21 21 p., 866.

    Research output: Contribution to journalArticlepeer-review

  45. Protein Engineering of DNA-Dependent Enzymes

    Yudkina, A. V. & Zharkov, D. O., 8 May 2020, Mechanisms of Genome Protection and Repair. Zharkov, D. O. (ed.). Springer, Vol. 1241. p. 19-33 15 p. (Advances in experimental medicine and biology).

    Research output: Chapter in Book/Report/Conference proceedingChapterResearchpeer-review

  46. Inhibitors of DNA glycosylases as prospective drugs

    Mechetin, G. V., Endutkin, A. V., Diatlova, E. A. & Zharkov, D. O., 28 Apr 2020, In: International Journal of Molecular Sciences. 21, 9, 30 p., 3118.

    Research output: Contribution to journalReview articlepeer-review

  47. Reading Targeted DNA Damage in the Active Demethylation Pathway: Role of Accessory Domains of Eukaryotic AP Endonucleases and Thymine-DNA Glycosylases

    Popov, A. V., Grin, I. R., Dvornikova, A. P., Matkarimov, B. T., Groisman, R., Saparbaev, M. & Zharkov, D. O., 13 Mar 2020, In: Journal of Molecular Biology. 432, 6, p. 1747-1768 22 p.

    Research output: Contribution to journalReview articlepeer-review

ID: 3458293