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  1. 2022

  2. FastContext: A tool for identification of adapters and other sequence patterns in next generation sequencing (NGS) data

    Viesná, Е. & Fishman, V., Dec 2022, In: Vavilovskii Zhurnal Genetiki i Selektsii. 26, 8, p. 806-809 4 p., 10.

    Research output: Contribution to journal › Article › peer-review

  3. Method for the Isolation of “RNA-seq-Quality” RNA from Human Intervertebral Discs after Mortar and Pestle Homogenization

    Ivanov, A. A., Leonova, O. N., Wiebe, D. S., Krutko, A. V., Gridina, M. M., Fishman, V. S., Aulchenko, Y. S., Tsepilov, Y. A. & Golubeva, T. S., Nov 2022, In: Cells. 11, 22, 3578.

    Research output: Contribution to journal › Article › peer-review

  4. Single-Cell DNA Methylation Analysis of Chicken Lampbrush Chromosomes

    Nurislamov, A., Lagunov, T., Gridina, M., Krasikova, A. & Fishman, V., 20 Oct 2022, In: International Journal of Molecular Sciences. 23, 20, 12601.

    Research output: Contribution to journal › Article › peer-review

  5. Editorial: The role of high-order chromatin organization in gene regulation

    Fishman, V. & Pindyurin, A. V., 3 Oct 2022, In: Frontiers in Genetics. 13, 1045787.

    Research output: Contribution to journal › Editorial › peer-review

  6. Comparison and critical assessment of single-cell Hi-C protocols

    Gridina, M., Taskina, A., Lagunov, T., Nurislamov, A., Kulikova, T., Krasikova, A. & Fishman, V., Oct 2022, In: Heliyon. 8, 10, 6 p., e11023.

    Research output: Contribution to journal › Article › peer-review

  7. 3DGenBench: a web-server to benchmark computational models for 3D Genomics

    Belokopytova, P., Viesná, E., Chiliński, M., Qi, Y., Salari, H., Di Stefano, M., Esposito, A., Conte, M., Chiariello, A. M., Teif, V. B., Plewczynski, D., Zhang, B., Jost, D. & Fishman, V., 5 Jul 2022, In: Nucleic Acids Research. 50, W1, p. W4-W12

    Research output: Contribution to journal › Article › peer-review

  8. 2021

  9. Derivation of Ringed Seal (Phoca hispida) Induced Multipotent Stem Cells

    Beklemisheva, V. R., Belokopytova, P. S., Fishman, V. S. & Menzorov, A. G., 1 Dec 2021, In: Cellular reprogramming. 23, 6, p. 326-335 10 p.

    Research output: Contribution to journal › Article › peer-review

  10. Здесь и там: двусторонняя локализация интеграций трансгена: the double-side transgene localization

    Salnikov, P. A., Khabarova, A. A., Koksharova, G. S., Mungalov, R., Belokopytova, P. S., Pristyazhnuk, I. E., Nurislamov, A. R., Somatich, P., Gridina, M. M. & Fishman, V. S., Oct 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 6, p. 607-612 6 p., 1.

    Research output: Contribution to journal › Article › peer-review

  11. A cookbook for DNase Hi-C

    Gridina, M., Mozheiko, E., Valeev, E., Nazarenko, L. P., Lopatkina, M. E., Markova, Z. G., Yablonskaya, M. I., Voinova, V. Y., Shilova, N. V., Lebedev, I. N. & Fishman, V., 20 Mar 2021, In: Epigenetics and Chromatin. 14, 1, 15.

    Research output: Contribution to journal › Article › peer-review

  12. Erythrocytes 3D genome organization in vertebrates

    Ryzhkova, A., Taskina, A., Khabarova, A., Fishman, V. & Battulin, N., Feb 2021, In: Scientific Reports. 11, 1, 4414.

    Research output: Contribution to journal › Article › peer-review

  13. Predicting Genome Architecture: Challenges and Solutions

    Belokopytova, P. & Fishman, V., 22 Jan 2021, In: Frontiers in Genetics. 11, 15 p., 617202.

    Research output: Contribution to journal › Review article › peer-review

  14. Естественно-научные предметы. Практическая молекулярная генетика для начинающих: 8-9ые классы

    Аульченко, Ю. С., Баттулин, Н. Р., Бородин, П. М., Воронина, Е. Н., Карташов, М. Ю., Колесникова, Т. Д., Нижников, А. А., Пилипенко, А. С., Посух, О. В., Седых, С. Е., Соловьев, В. И., Торгашева, Н. А., Фишман, В. С., Хлесткина, Е. К., Цыбко, А. С., Шнайдер, Т. А. & Юнусова, А. М., 2021, Москва : Просвещение. 272 p.

    Research output: Book/Report › Teaching manual › peer-review

  15. 2020

  16. DNA barcoding reveals that injected transgenes are predominantly processed by homologous recombination in mouse zygote

    Smirnov, A., Fishman, V., Yunusova, A., Korablev, A., Serova, I., Skryabin, B. V., Rozhdestvensky, T. S. & Battulin, N., 24 Jan 2020, In: Nucleic Acids Research. 48, 2, p. 719-735 17 p.

    Research output: Contribution to journal › Article › peer-review

  17. Quantitative prediction of enhancer-promoter interactions

    Belokopytova, P. S., Nuriddinov, M. A., Mozheiko, E. A., Fishman, D. & Fishman, V., 1 Jan 2020, In: Genome Research. 30, 1, p. 72-84 13 p.

    Research output: Contribution to journal › Article › peer-review

  18. 2019

  19. C-InterSecture-a computational tool for interspecies comparison of genome architecture

    Nuriddinov, M. & Fishman, V., 1 Dec 2019, In: Bioinformatics (Oxford, England). 35, 23, p. 4912-4921 10 p.

    Research output: Contribution to journal › Article › peer-review

  20. Time origin and structural analysis of the induced CRISPR/cas9 megabase-sized deletions and duplications involving the Cntn6 gene in mice

    Pristyazhnyuk, I. E., Minina, J., Korablev, A., Serova, I., Fishman, V., Gridina, M., Rozhdestvensky, T. S., Gubar, L., Skryabin, B. V. & Serov, O. L., 2 Oct 2019, In: Scientific Reports. 9, 1, 1 p., 14161.

    Research output: Contribution to journal › Article › peer-review

  21. Detection of Point Mutations and Chromosomal Translocations Based on Massive Parallel Sequencing of Enriched 3C Libraries

    Mozheiko, E. A. & Fishman, V. S., 1 Oct 2019, In: Russian Journal of Genetics. 55, 10, p. 1273-1281 9 p.

    Research output: Contribution to journal › Article › peer-review

  22. Targeted genomic integration of EGFP under tubulin beta 3 class III promoter and mEos2 under tryptophan hydroxylase 2 promoter does not produce sufficient levels of reporter gene expression

    Menzorov, A. G., Orishchenko, K. E., Fishman, V. S., Shevtsova, A. A., Mungalov, R. V., Pristyazhnyuk, I. E., Kizilova, E. A., Matveeva, N. M., Alenina, N., Bader, M., Rubtsov, N. B. & Serov, O. L., Oct 2019, In: Journal of Cellular Biochemistry. 120, 10, p. 17208-17218 11 p.

    Research output: Contribution to journal › Article › peer-review

  23. 3D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin

    Fishman, V., Battulin, N., Nuriddinov, M., Maslova, A., Zlotina, A., Strunov, A., Chervyakova, D., Korablev, A., Serov, O. & Krasikova, A., 25 Jan 2019, In: Nucleic Acids Research. 47, 2, p. 648-665 18 p.

    Research output: Contribution to journal › Article › peer-review

  24. 2018

  25. A mosaic intragenic microduplication of LAMA1 and a constitutional 18p11.32 microduplication in a patient with keratosis pilaris and intellectual disability

    Kashevarova, A. A., Nazarenko, L. P., Skryabin, N. A., Nikitina, T. V., Vasilyev, S. A., Tolmacheva, E. N., Lopatkina, M. E., Salyukova, O. A., Chechetkina, N. N., Vorotelyak, E. A., Kalabusheva, E. P., Fishman, V. S., Kzhyshkowska, J., Graziano, C., Magini, P., Romeo, G. & Lebedev, I. N., 1 Nov 2018, In: American Journal of Medical Genetics, Part A. 176, 11, p. 2395-2403 9 p.

    Research output: Contribution to journal › Article › peer-review

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