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  1. Direction and modality of transcription changes caused by TAD boundary disruption in Slc29a3/Unc5b locus depends on tissue-specific epigenetic context

    Salnikov, P., Belokopytova, P., Yan, A., Viesná, E., Korablev, A., Serova, I., Lukyanchikova, V., Stepanchuk, Y., Torgunakov, N., Tikhomirov, S. & Fishman, V., 12 Aug 2025, In: Epigenetics & chromatin. 18, 1, 55.

    Research output: Contribution to journal › Article › peer-review

  2. DNA and Histone Modifications Identify a Putative Controlling Element (CE) on the X Chromosome of Sciara coprophila

    Posukh, O. V., Shloma, V. V., Skrypnik, P. A., Maksimov, D. A., Antoshina, P. A., Kalashnikova, D. A., Nurislamov, A., Lukyanchikova, V. A., Torgunakov, N., Battulin, N. R., Fishman, V. S., Vyatkin, Y. V., Smelova, A. A., Romanov, S. E., Laktionov, P. P., Valishayev, D., Belyakin, S. N. & Singh, P. B., 12 Aug 2025, In: Cells. 14, 16, 16 p., 1243.

    Research output: Contribution to journal › Article › peer-review

  3. DNA barcoding reveals that injected transgenes are predominantly processed by homologous recombination in mouse zygote

    Smirnov, A., Fishman, V., Yunusova, A., Korablev, A., Serova, I., Skryabin, B. V., Rozhdestvensky, T. S. & Battulin, N., 24 Jan 2020, In: Nucleic Acids Research. 48, 2, p. 719-735 17 p.

    Research output: Contribution to journal › Article › peer-review

  4. Editorial: The role of high-order chromatin organization in gene regulation

    Fishman, V. & Pindyurin, A. V., 3 Oct 2022, In: Frontiers in Genetics. 13, 1045787.

    Research output: Contribution to journal › Editorial › peer-review

  5. Erythrocytes 3D genome organization in vertebrates

    Ryzhkova, A., Taskina, A., Khabarova, A., Fishman, V. & Battulin, N., Feb 2021, In: Scientific Reports. 11, 1, 4414.

    Research output: Contribution to journal › Article › peer-review

  6. Expanding the list of sequence-agnostic enzymes for chromatin conformation capture assays with S1 nuclease

    Maria, G., Andrey, P., Artem, S., Nikita, T., Andrey, K., Evgeny, K., Oxana, R., Maxim, F. & Veniamin, F., 11 Dec 2023, In: Epigenetics & chromatin. 16, 1, 13 p., 48.

    Research output: Contribution to journal › Article › peer-review

  7. FastContext: A tool for identification of adapters and other sequence patterns in next generation sequencing (NGS) data

    Viesná, Е. & Fishman, V., Dec 2022, In: Vavilovskii Zhurnal Genetiki i Selektsii. 26, 8, p. 806-809 4 p., 10.

    Research output: Contribution to journal › Article › peer-review

  8. Function and Evolution of the Loop Extrusion Machinery in Animals

    Kabirova, E., Nurislamov, A., Shadskiy, A., Smirnov, A., Popov, A., Salnikov, P., Battulin, N. & Fishman, V., 6 Mar 2023, In: International Journal of Molecular Sciences. 24, 5, 5017.

    Research output: Contribution to journal › Review article › peer-review

  9. Interpreting Chromosomal Rearrangements in the Context of 3-Dimentional Genome Organization: A Practical Guide for Medical Genetics

    Fishman, V. S., Salnikov, P. A. & Battulin, N. R., 1 Apr 2018, In: Biochemistry (Moscow). 83, 4, p. 393-401 9 p.

    Research output: Contribution to journal › Review article › peer-review

  10. Lampbrush chromosome studies in the post-genomic era

    Krasikova, A., Fishman, V. & Kulikova, T., May 2023, In: BioEssays. 45, 5, 7 p., e2200250.

    Research output: Contribution to journal › Article › peer-review

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