1. Image-based analysis of quantitative morphological characteristics of wild potato tubers using the desktop application SeedСounter

    Ivanova, K. A., Komyshev, E. G., Genaev, M. A., Egorova, A. A., Koloshina, K. A., Chalaya, N. A., Afonnikov, D. A., Kochetov, A. V., Rogozina, E. V. & Gerasimova, S. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 5, p. 519-526 8 p.

    Research output: Contribution to journalArticlepeer-review

  2. Identification of residues of the archaeal RNA-binding Nip7 proteins specific to environmental conditions

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 1 Apr 2017, In: Journal of Bioinformatics and Computational Biology. 15, 2, p. 1650036 18 p., 1650036.

    Research output: Contribution to journalArticlepeer-review

  3. Identification of Novel Loci Precisely Modulating Pre-Harvest Sprouting Resistance and Red Color Components of the Seed Coat in T. aestivum L.

    Afonnikova, S. D., Kiseleva, A. A., Fedyaeva, A. V., Komyshev, E. G., Koval, V. S., Afonnikov, D. A. & Salina, E. A., 9 May 2024, In: Plants. 13, 10, 21 p., 1309.

    Research output: Contribution to journalArticlepeer-review

  4. Identification of Antimicrobial Peptides from Novel Lactobacillus fermentum Strain

    Pavlova, A. S., Ozhegov, G. D., Arapidi, G. P., Butenko, I. O., Fomin, E. S., Alemasov, N. A., Afonnikov, D. A., Yarullina, D. R., Ivanov, V. T., Govorun, V. M. & Kayumov, A. R., 1 Feb 2020, In: Protein Journal. 39, 1, p. 73-84 12 p.

    Research output: Contribution to journalArticlepeer-review

  5. ICAnnoLncRNA: A Snakemake Pipeline for a Long Non-Coding-RNA Search and Annotation in Transcriptomic Sequences

    Pronozin, A. Y. & Afonnikov, D. A., 24 Jun 2023, In: Genes. 14, 7, 1331.

    Research output: Contribution to journalArticlepeer-review

  6. Hypoxia exerts oxidative stress and changes in expression of antioxidant enzyme genes in gills of Mytilus galloprovincialis (Lamarck, 1819)

    Andreyeva, A. Y., Gostyukhina, O. L., Kladchenko, E. S., Afonnikov, D. A., Rasskazov, D. A., Lantushenko, A. O. & Vodiasova, E. A., 2021, In: Marine Biology Research. 17, 4, p. 369-379 11 p.

    Research output: Contribution to journalArticlepeer-review

  7. High temperature and pressure influence the interdomain orientation of Nip7 proteins from P. abyssi and P. furiosus: MD simulations

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 2 Jan 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 1, p. 68-82 15 p.

    Research output: Contribution to journalArticlepeer-review

  8. Haplotype analysis of APOE intragenic SNPs

    Babenko, V. N., Afonnikov, D. A., Ignatieva, E. V., Klimov, A. V., Gusev, F. E. & Rogaev, E. I., 19 Apr 2018, In: BMC Neuroscience. 19, Suppl 1, p. 16 12 p., 16.

    Research output: Contribution to journalArticlepeer-review

  9. Gbs-dp: a bioinformatics pipeline for processing data coming from genotyping by sequencing

    Pronozin, A. Y., Salina, E. A. & Afonnikov, D. A., Dec 2023, In: Vavilovskii Zhurnal Genetiki i Selektsii. 27, 7, p. 737-745 9 p.

    Research output: Contribution to journalArticlepeer-review

  10. Evaluation of the Spike Diversity of Seven Hexaploid Wheat Species and an Artificial Amphidiploid Using a Quadrangle Model Obtained from 2D Images

    Komyshev, E. G., Genaev, M. A., Kruchinina, Y. V., Koval, V. S., Goncharov, N. P. & Afonnikov, D. A., Oct 2024, In: Plants. 13, 19, 2736.

    Research output: Contribution to journalArticlepeer-review

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