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  1. Orthoscape: A cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles

    Mustafin, Z. S., Lashin, S. A., Matushkin, Y. G., Gunbin, K. V. & Afonnikov, D. A., 27 Jan 2017, In: Bioinformatics. 18, Suppl 1, p. 1-9 9 p., 28.

    Research output: Contribution to journal › Article › peer-review

  2. OrthoML2GO: предсказание функций белков по гомологии с использованием ортогрупп и алгоритмов машинного обучения

    Malyugin, E. V. & Afonnikov, D. A., 2025, In: Vavilovskii Zhurnal Genetiki i Selektsii. 29, 7, p. 1145-1154 10 p., 22.

    Research output: Contribution to journal › Article › peer-review

  3. Online resources on gene networks containing human and animal data

    Ignatieva, E. V., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 8, p. 895-902 8 p.

    Research output: Contribution to journal › Article › peer-review

  4. NLR genes related transcript sets in potato cultivars bearing genetic material of wild Mexican solanum species

    Kochetov, A. V., Afonnikov, D. A., Shmakov, N., Vasiliev, G. V., Antonova, O. Y., Shatskaya, N. V., Glagoleva, A. Y., Ibragimova, S. M., Khiutti, A., Afanasenko, O. S. & Gavrilenko, T. A., Dec 2021, In: Agronomy. 11, 12, 2426.

    Research output: Contribution to journal › Article › peer-review

  5. New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes

    Ershov, N. I., Mordvinov, V. A., Prokhortchouk, E. B., Pakharukova, M. Y., Gunbin, K. V., Ustyantsev, K., Genaev, M. A., Blinov, A. G., Mazur, A., Boulygina, E., Tsygankova, S., Khrameeva, E., Chekanov, N., Fan, G., Xiao, A., Zhang, H., Xu, X., Yang, H., Solovyev, V., Lee, S. M. Y., & 3 othersLiu, X., Afonnikov, D. A. & Skryabin, K. G., 22 May 2019, In: BMC Genomics. 20, 1, p. 399 22 p., 399.

    Research output: Contribution to journal › Article › peer-review

  6. Morphometry of the wheat spike by analyzing 2D images

    Genaev, M. A., Komyshev, E. G., Smirnov, N. V., Kruchinina, Y. V., Goncharov, N. P. & Afonnikov, D. A., 17 Jul 2019, In: Agronomy. 9, 7, 390.

    Research output: Contribution to journal › Article › peer-review

  7. Modern opportunities for improving quality of bakery products via realizing the bread wheat genetic potential-by-environment interactions (review)

    Khlestkina, E. K., Zhuravleva, E. V., Pshenichnikova, T. A., Usenko, N. I., Morozova, E. V., Osipova, S. V., Permyakova, M. D., Afonnikov, D. A. & Otmakhova, Y. S., 1 Jan 2017, In: Sel'skokhozyaistvennaya Biologiya. 52, 3, p. 501-514 14 p.

    Research output: Contribution to journal › Article › peer-review

  8. Metabolic pathways and genes identified by RNA-seq analysis of barley near-isogenic lines differing by allelic state of the Black lemma and pericarp (Blp) gene

    Glagoleva, A. Y., Shmakov, N. A., Shoeva, O. Y., Vasiliev, G. V., Shatskaya, N. V., Börner, A., Afonnikov, D. A. & Khlestkina, E. K., 14 Nov 2017, In: BMC Plant Biology. 17, Suppl 1, p. 182 9 p., 182.

    Research output: Contribution to journal › Article › peer-review

  9. Mechanical behavior of cells within a cell-based model of wheat leaf growth

    Zubairova, U., Nikolaev, S., Penenko, A., Podkolodnyy, N., Golushko, S., Afonnikov, D. & Kolchanov, N., 15 Dec 2016, In: Frontiers in Plant Science. 7, DECEMBER2016, 15 p., 1878.

    Research output: Contribution to journal › Article › peer-review

  10. Leaf hairiness in potato Solanum tuberosum: Morphology, function and methods of analysis

    Doroshkov, A. V. & Afonnikov, D. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 46-53 8 p.

    Research output: Contribution to journal › Review article › peer-review

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