1. 2019
  2. Diastereomers of a mono-substituted phosphoryl guanidine trideoxyribonucleotide: Isolation and properties

    Lomzov, A. A., Kupryushkin, M. S., Shernyukov, A. V., Nekrasov, M. D., Dovydenko, I. S., Stetsenko, D. A. & Pyshnyi, D. V., 11 Jun 2019, In: Biochemical and Biophysical Research Communications. 513, 4, p. 807-811 5 p.

    Research output: Contribution to journalArticlepeer-review

  3. Comparative physico chemical and biological studies of phosphorylguanidine oligonucleotide diasteriomers

    Lomzov, A. A., Apukhtina, V. S., Shernyukov, A. V., Kupryushkin, M. S., Shevelev, G. Y. & Pyshnyi, D. V., 10 May 2019, In: Journal of Biomolecular Structure and Dynamics. 37, p. 76-76 1 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  4. Structure and hybridization properties of phosphorylguanidine oligonucleotides

    Lomzov, A. A., Golyshev, V. M., Dyudeeva, E. S., Kupryushkin, M. S. & Pyshnyi, D. V., 10 May 2019, In: Journal of Biomolecular Structure and Dynamics. 37, p. 83-84 2 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  5. Molecular Dynamics Simulation of Polarizable Gold Nanoparticles Interacting with Sodium Citrate

    Perfilieva, O. A., Pyshnyi, D. V. & Lomzov, A. A., 12 Feb 2019, In: Journal of Chemical Theory and Computation. 15, 2, p. 1278-1292 15 p.

    Research output: Contribution to journalArticlepeer-review

  6. 2018
  7. Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation

    Gruber, D. R., Toner, J. J., Miears, H. L., Shernyukov, A. V., Kiryutin, A. S., Lomzov, A. A., Endutkin, A. V., Grin, I. R., Petrova, D. V., Kupryushkin, M. S., Yurkovskaya, A. V., Johnson, E. C., Okon, M., Bagryanskaya, E. G., Zharkov, D. O. & Smirnov, S. L., 16 Nov 2018, In: Nucleic Acids Research. 46, 20, p. 10827-10839 13 p.

    Research output: Contribution to journalArticlepeer-review

  8. Nucleotide modifications decrease innate immune response induced by synthetic analogs of snRNAs and snoRNAs

    Stepanov, G., Zhuravlev, E., Shender, V., Nushtaeva, A., Balakhonova, E., Mozhaeva, E., Kasakin, M., Koval, V., Lomzov, A., Pavlyukov, M., Malyants, I., Zhorov, M., Kabilova, T., Chernolovskaya, E., Govorun, V., Kuligina, E., Semenov, D. & Richter, V., 2 Nov 2018, In: Genes. 9, 11, 18 p., 531.

    Research output: Contribution to journalArticlepeer-review

  9. Modified Oligonucleotides for Guiding RNA Cleavage Using Bacterial RNase P

    Novopashina, D. S., Nazarov, A. S., Vorobjeva, M. A., Kuprushkin, M. S., Davydova, A. S., Lomzov, A. A., Pyshnyi, D. V., Altman, S. & Venyaminova, A. G., 1 Nov 2018, In: Molecular Biology. 52, 6, p. 905-912 8 p.

    Research output: Contribution to journalArticlepeer-review

  10. Modified Oligonucleotides for Guiding RNA Cleavage Using Bacterial RNase P

    Novopashina, D. S., Nazarov, A. S., Vorobjeva, M. A., Kuprushkin, M. S., Davydova, A. S., Lomzov, A. A., Pyshnyi, D. V., Altman, S. & Venyaminova, A. G., 1 Nov 2018, In: Molekuliarnaia biologiia. 52, 6, p. 1045-1054 10 p.

    Research output: Contribution to journalArticlepeer-review

  11. Data on PAGE analysis and MD simulation for the interaction of endonuclease Apn1 from Saccharomyces cerevisiae with DNA substrates containing 5,6-dihydrouracyl and 2-aminopurine

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Oct 2018, In: Data in Brief. 20, p. 1515-1524 10 p.

    Research output: Contribution to journalArticlepeer-review

  12. Apurinic/apyrimidinic endonuclease Apn1 from Saccharomyces cerevisiae is recruited to the nucleotide incision repair pathway: Kinetic and structural features

    Dyakonova, E. S., Koval, V. V., Lomzov, A. A., Ishchenko, A. A. & Fedorova, O. S., 1 Sept 2018, In: Biochimie. 152, p. 53-62 10 p.

    Research output: Contribution to journalArticlepeer-review

  13. Effect of the relief on the measurement of bond rupture force with the help of AFM: The dynamics of interaction and optimization of the procedure

    Kurus, N. N., Dultsev, F. N., Shevelev, G., Lomzov, A. A. & Pyshnyi, D. V., 28 Jul 2018, In: Analytical Methods. 10, 28, p. 3498-3505 8 p.

    Research output: Contribution to journalArticlepeer-review

  14. A new approach to precise thermodynamic characterization of hybridization properties of modified oligonucleotides: Comparative studies of deoxyribo- and glycine morpholine pentaadenines

    Golyshev, V. M., Abramova, T. V., Pyshnyi, D. V. & Lomzov, A. A., 1 Mar 2018, In: Biophysical Chemistry. 234, p. 24-33 10 p.

    Research output: Contribution to journalArticlepeer-review

  15. A Versatile Approach to Attachment of Triarylmethyl Labels to DNA for Nanoscale Structural EPR Studies at Physiological Temperatures

    Shevelev, G. Y., Gulyak, E. L., Lomzov, A. A., Kuzhelev, A. A., Krumkacheva, O. A., Kupryushkin, M. S., Tormyshev, V. M., Fedin, M. V., Bagryanskaya, E. G. & Pyshnyi, D. V., 11 Jan 2018, In: Journal of Physical Chemistry B. 122, 1, p. 137-143 7 p.

    Research output: Contribution to journalArticlepeer-review

  16. Effect of laser UV radiation on the eye scleral tissue in patients with open-angle glaucoma

    Razhev, A. M., Iskakov, I. A., Churkin, D. S., Orishich, A. M., Maslov, N. A., Tsibul’skaya, E. O., Lomzov, A. A., Ermakova, O. V., Trunov, A. N. & Chernykh, V. V., 1 Jan 2018, In: Quantum Electronics. 48, 5, p. 481-486 6 p.

    Research output: Contribution to journalArticlepeer-review

  17. Structural basis for the recognition and processing of DNA containing bulky lesions by the mammalian nucleotide excision repair system

    Evdokimov, A. N., Tsidulko, A. Y., Popov, A. V., Vorobiev, Y. N., Lomzov, A. A., Koroleva, L. S., Silnikov, V. N., Petruseva, I. O. & Lavrik, O. I., 1 Jan 2018, In: DNA Repair. 61, p. 86-98 13 p.

    Research output: Contribution to journalArticlepeer-review

  18. 2017
  19. Global DNA dynamics of 8-oxoguanine repair by human OGG1 revealed by stopped-flow kinetics and molecular dynamics simulation

    Lukina, M. V., Koval, V. V., Lomzov, A. A., Zharkov, D. O. & Fedorova, O. S., 1 Oct 2017, In: Molecular BioSystems. 13, 10, p. 1954-1966 13 p.

    Research output: Contribution to journalArticlepeer-review

  20. Rational design and studies of excimer forming novel dual probes to target RNA

    Krasheninina, O. A., Lomzov, A. A., Fishman, V. S., Novopashina, D. S. & Venyaminova, A. G., 1 Apr 2017, In: Bioorganic and Medicinal Chemistry. 25, 7, p. 2244-2250 7 p.

    Research output: Contribution to journalArticlepeer-review

  21. Processing of the abasic sites clustered with the benzo[a]pyrene adducts by the base excision repair enzymes

    Starostenko, L. V., Rechkunova, N. I., Lebedeva, N. A., Lomzov, A. A., Koval, V. V. & Lavrik, O. I., 1 Feb 2017, In: DNA Repair. 50, p. 43-53 11 p.

    Research output: Contribution to journalArticlepeer-review

  22. QCM-based rupture force measurement as a tool to study DNA dehybridization and duplex stability

    Dultsev, F. N., Kolosovsky, E. A., Lomzov, A. A. & Pyshnyi, D. V., Feb 2017, In: Analytical and Bioanalytical Chemistry. 409, 4, p. 891-901 11 p.

    Research output: Contribution to journalArticlepeer-review

  23. 2016
  24. Towards an understanding of crystallization from solution. DFT studies of multi-component serotonin crystals

    Rychkov, D. A., Hunter, S., Kovalskii, V. Y., Lomzov, A. A., Pulham, C. R. & Boldyreva, E. V., 15 Jul 2016, In: Computational and Theoretical Chemistry. 1088, p. 52-61 10 p.

    Research output: Contribution to journalArticlepeer-review

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