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  1. A panel of rsnps demonstrating allelic asymmetry in both chip-seq and rna-seq data and the search for their phenotypic outcomes through analysis of degs

    Korbolina, E. E., Bryzgalov, L. O., Ustrokhanova, D. Z., Postovalov, S. N., Poverin, D. V., Damarov, I. S. & Merkulova, T. I., 2 Jul 2021, In: International Journal of Molecular Sciences. 22, 14, 7240.

    Research output: Contribution to journal › Article › peer-review

  2. A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package

    Levitsky, V., Zemlyanskaya, E., Oshchepkov, D., Podkolodnaya, O., Ignatieva, E., Grosse, I., Mironova, V. & Merkulova, T., 2 Dec 2019, In: Nucleic Acids Research. 47, 21, p. e139 14 p.

    Research output: Contribution to journal › Article › peer-review

  3. Asymmetric conservation within pairs of co-occurred motifs mediates weak direct binding of transcription factors in chip-seq data

    Levitsky, V., Oshchepkov, D., Zemlyanskaya, E. & Merkulova, T., 21 Aug 2020, In: International Journal of Molecular Sciences. 21, 17, p. 1-22 22 p., 6023.

    Research output: Contribution to journal › Article › peer-review

  4. Asymmetry of Motif Conservation Within Their Homotypic Pairs Distinguishes DNA-Binding Domains of Target Transcription Factors in ChIP-Seq Data

    Levitsky, V. G., Raditsa, V. V., Tsukanov, A. V., Mukhin, A. M., Zhimulev, I. F. & Merkulova, T. I., 4 Jan 2025, In: International Journal of Molecular Sciences. 26, 1, 386.

    Research output: Contribution to journal › Article › peer-review

  5. Consequences of early life stress on genomic landscape of H3K4me3 in prefrontal cortex of adult mice

    Ershov, N. I., Bondar, N. P., Lepeshko, A. A., Reshetnikov, V. V., Ryabushkina, J. A. & Merkulova, T. I., 9 Feb 2018, In: BMC Genomics. 19, Suppl 3, p. 93 11 p., 93.

    Research output: Contribution to journal › Article › peer-review

  6. Data of correlation analysis between the density of H3K4me3 in promoters of genes and gene expression: Data from RNA-seq and ChIP-seq analyses of the murine prefrontal cortex

    Reshetnikov, V. V., Kisaretova, P. E., Ershov, N. I., Merkulova, T. I. & Bondar, N. P., Dec 2020, In: Data in Brief. 33, 7 p., 106365.

    Research output: Contribution to journal › Article › peer-review

  7. Effect of neonatal dexamethasone treatment on cognitive abilities of adult male mice and gene expression in the hypothalamus

    Bondar, N. P., Reshetnikov, V. V., Burdeeva, K. V. & Merkulova, T. I., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 4, p. 456-464 9 p.

    Research output: Contribution to journal › Article › peer-review

  8. Functional study of potential regulatory SNPs (rs590352, rs11542583, rs3829202, rs78317230, rs2072580, rs4796672)

    Degtyareva, A., Leberfarb, E., Brusentsov, I., Kuzina, T. & Merkulova, T., Jul 2020, Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc., p. 122-125 4 p. 9214780. (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  9. Genes associated with cognitive performance in the Morris water maze: an RNA-seq study

    Reshetnikov, V. V., Kisaretova, P. E., Ershov, N. I., Shulyupova, A. S., Oshchepkov, D. Y., Klimova, N. V., Ivanchihina, A. V., Merkulova, T. I. & Bondar, N. P., Dec 2020, In: Scientific Reports. 10, 1, 16 p., 22078.

    Research output: Contribution to journal › Article › peer-review

  10. MetArea: a software package for analysis of the mutually exclusive occurrence in pairs of motifs of transcription factor binding sites based on ChIP-seq data

    Levitsky, V. G., Tsukanov, A. V. & Merkulova, T. I., Dec 2024, In: Vavilovskii Zhurnal Genetiki i Selektsii. 28, 8, p. 822-833 12 p.

    Research output: Contribution to journal › Article › peer-review

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