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  1. 2022

  2. The Cytogenetic Map of the Nile Crocodile (Crocodylus niloticus, Crocodylidae, Reptilia) with Fluorescence In Situ Localization of Major Repetitive DNAs

    Romanenko, S. A., Prokopov, D. Y., Proskuryakova, A. A., Davletshina, G. I., Tupikin, A. E., Kasai, F., Ferguson-Smith, M. A. & Trifonov, V. A., Nov 2022, In: International Journal of Molecular Sciences. 23, 21, 13063.

    Research output: Contribution to journal › Article › peer-review

  3. Validation of preoperative diagnosis of malignant thyroid tumors using a molecular classifier

    Titov, S. E., Lukyanov, S. A., Kozorezova, E. S., Demenkov, P. S., Sergiyko, S. V., Veryaskina, Y. A., Vorobyov, S. L., Sleptsov, I. V. & Gostimsky, A. V., 2022, In: Voprosy Onkologii. 68, 6, p. 741-751 11 p.

    Research output: Contribution to journal › Article › peer-review

  4. 2021

  5. The origin and evolution of a two-component system of paralogous genes encoding the centromeric histone CENH3 in cereals

    Elisafenko, E. A., Evtushenko, E. V. & Vershinin, A. V., Dec 2021, In: BMC Plant Biology. 21, 1, 541.

    Research output: Contribution to journal › Article › peer-review

  6. Replication timing analysis in polyploid cells reveals rif1 uses multiple mechanisms to promote underreplication in drosophila

    Das, S., Caballero, M., Kolesnikova, T., Zhimulev, I., Koren, A. & Nordman, J., Nov 2021, In: Genetics. 219, 3, iyab147.

    Research output: Contribution to journal › Article › peer-review

  7. The organization of pericentromeric heterochromatin in polytene chromosome 3 of the drosophila melanogaster line with the rif11; suures su(Var)3-906 mutations suppressing underreplication

    Zykova, T., Maltseva, M., Goncharov, F., Boldyreva, L., Pokholkova, G., Kolesnikova, T. & Zhimulev, I., Nov 2021, In: Cells. 10, 11, 2809.

    Research output: Contribution to journal › Article › peer-review

  8. Whole-chromosome fusions in the karyotype evolution of Sceloporus (Iguania, Reptilia) are more frequent in sex chromosomes than autosomes

    Lisachov, A. P., Tishakova, K. V., Romanenko, S. A., Molodtseva, A. S., Prokopov, D. Y., Pereira, J. C., Ferguson-Smith, M. A., Borodin, P. M. & Trifonov, V. A., 13 Sept 2021, In: Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 376, 1833, 1 p., 20200099.

    Research output: Contribution to journal › Article › peer-review

  9. VAV1-overexpressing YT cells display improved cytotoxicity against malignant cells

    Smagina, A. S., Kulemzin, S. V., Yusubalieva, G. M., Kedrova, A. G., Sanzharov, A. E., Ivanov, Y. V., Matvienko, D. A., Kalsin, V. A., Gorchakov, A. A., Baklaushev, V. P. & Taranin, A. V., Aug 2021, In: Biotechnology and Applied Biochemistry. 68, 4, p. 849-855 7 p.

    Research output: Contribution to journal › Article › peer-review

  10. Evolution of tandemly arranged repetitive DNAs in three species of Cyprinoidei with different ploidy levels

    Bishani, A., Prokopov, D. Y., Romanenko, S. A., Molodtseva, A. S., Perelman, P. L., Interesova, E. A., Beklemisheva, V. R., Graphodatsky, A. S. & Trifonov, V. A., May 2021, In: Cytogenetic and Genome Research. 161, 1-2, p. 32-42 11 p.

    Research output: Contribution to journal › Article › peer-review

  11. Genetic Diversity of the Prussian Carp Carassius gibelio (Cyprinidae) in the Middle Ob Basin

    Pobedintseva, M. A., Reshetnikova, S. N., Serdyukova, N. A., Bishani, A., Trifonov, V. A. & Interesova, E. A., Apr 2021, In: Russian Journal of Genetics. 57, 4, p. 446-452 7 p.

    Research output: Contribution to journal › Article › peer-review

  12. Malignant and benign thyroid nodule differentiation through the analysis of blood plasma with terahertz spectroscopy

    Konnikova, M. R., Cherkasova, O. P., Nazarov, M. M., Vrazhnov, D. A., Kistenev, Y. V., Titov, S. E., Kopeikina, E. V., Shevchenko, S. P. & Shkurinov, A. P., 1 Feb 2021, In: Biomedical Optics Express. 12, 2, p. 1020-1035 16 p.

    Research output: Contribution to journal › Article › peer-review

  13. Preoperative Typing of Thyroid and Parathyroid Tumors with a Combined Molecular Classifier

    Titov, S. E., Kozorezova, E. S., Demenkov, P. S., Veryaskina, Y. A., Kuznetsova, I. V., Vorobyev, S. L., Chernikov, R. A., Sleptsov, I. V., Timofeeva, N. I. & Ivanov, M. K., 11 Jan 2021, In: Cancers. 13, 2, p. 1-17 17 p., 237.

    Research output: Contribution to journal › Article › peer-review

  14. The rise and fall of the ancient northern pike master sex determining gene

    Pan, Q., Feron, R., Jouanno, E., Darras, H., Herpin, A., Koop, B., Rondeau, E., Goetz, F. W., Larson, W. A., Bernatchez, L., Tringali, M., Curran, S. S., Saillant, E., Denys, G. P. J., von Hippel, F. A., Chen, S., López, J. A., Verreycken, H., Ocalewicz, K., Guyomard, R., & 15 othersEche, C., Lluch, J., Roques, C., Hu, H., Tabor, R., Dehaan, P., Nichols, K. M., Journot, L., Parrinello, H., Klopp, C., Interesova, E. A., Trifonov, V., Schartl, M., Postlethwait, J. & Guiguen, Y., Jan 2021, In: eLife. 10, p. 1-50 50 p.

    Research output: Contribution to journal › Article › peer-review

  15. Новые возможности дооперационной диагностики анапластического рака щитовидной железы

    Lukyanov, S. A., Sergiyko, S. V., Titov, S. E., Veryaskina, Y. A., Mudunov, A. M., Dobrokhotova, V. Z., Kozorezova, E. S., Vorobyov, S. L., Vazhenin, A. V., Romanchishen, A. F., Vabalaite, K. V., Vilkova, A. S., Timofeeva, N. I. & Ilina, T. E., 2021, In: Opuholi Golovy i Sei. 11, 1, p. 34-40 7 p., 3.

    Research output: Contribution to journal › Article › peer-review

  16. Прогностические возможности молекулярногенетического тестирования для оценки риска рецидива папиллярного рака щитовидной железы у детей

    Sergiyko, S. V., Lukyanov, S. A., Titov, S. E., Веряскина, Ю. А., Romanchishen, A. F., Gostimskiy, A. V., Kazachkov, E. L. & Pasternak, I. A., 2021, In: Voprosy Onkologii. 67, 4, p. 511-517 7 p., 9.

    Research output: Contribution to journal › Article › peer-review

  17. 2020

  18. Evolution of microRNA biogenesis genes in the sterlet (Acipenser ruthenus) and other polyploid vertebrates

    Fofanov, M. V., Prokopov, D. Y., Kuhl, H., Schartl, M. & Trifonov, V. A., 2 Dec 2020, In: International Journal of Molecular Sciences. 21, 24, p. 1-25 25 p., 9562.

    Research output: Contribution to journal › Article › peer-review

  19. Nucleosome positioning around transcription start site correlates with gene expression only for active chromatin state in drosophila interphase chromosomes

    Levitsky, V. G., Zykova, T. Y., Moshkin, Y. M. & Zhimulev, I. F., 1 Dec 2020, In: International Journal of Molecular Sciences. 21, 23, p. 1-10 10 p., 9282.

    Research output: Contribution to journal › Article › peer-review

  20. Retrotransposons and the evolution of genome size in pisum

    Ellis, T. H. N. & Vershinin, A. V., Dec 2020, In: High-Throughput. 9, 4, p. 1-17 17 p., 24.

    Research output: Contribution to journal › Article › peer-review

  21. Chromosome distribution of highly conserved tandemly arranged repetitive dnas in the siberian sturgeon (Acipenser baerii)

    Biltueva, L. S., Prokopov, D. Y., Romanenko, S. A., Interesova, E. A., Schartl, M. & Trifonov, V. A., Nov 2020, In: Genes. 11, 11, p. 1-18 18 p., 1375.

    Research output: Contribution to journal › Article › peer-review

  22. Molecular and cytological analysis of widely-used Gal4 driver lines for Drosophila neurobiology

    Ogienko, A. A., Andreyeva, E. N., Omelina, E. S., Oshchepkova, A. L. & Pindyurin, A. V., 1 Oct 2020, In: BMC Genetics. 21, Suppl 1, 11 p., 96.

    Research output: Contribution to journal › Article › peer-review

  23. Bioinformatic methods applied to the analysis of the genes retained after the whole genome duplication events in the sterlet genome (Acipenser ruthenus)

    Fofanov, M., Sheglova, T., Trifonov, V. & Schartl, M., Jul 2020, Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020. Institute of Electrical and Electronics Engineers Inc., p. 53-56 4 p. 9214587. (Proceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  24. Effects of Mutations in the Drosophila melanogaster Rif1 Gene on the Replication and Underreplication of Pericentromeric Heterochromatin in Salivary Gland Polytene Chromosomes

    Kolesnikova, T. D., Kolodyazhnaya, A. V., Pokholkova, G. V., Schubert, V., Dovgan, V. V., Romanenko, S. A., Prokopov, D. Y. & Zhimulev, I. F., 19 Jun 2020, In: Cells. 9, 6, 37 p., 1501.

    Research output: Contribution to journal › Article › peer-review

  25. The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization

    Du, K., Stöck, M., Kneitz, S., Klopp, C., Woltering, J. M., Adolfi, M. C., Feron, R., Prokopov, D., Makunin, A., Kichigin, I., Schmidt, C., Fischer, P., Kuhl, H., Wuertz, S., Gessner, J., Kloas, W., Cabau, C., Iampietro, C., Parrinello, H., Tomlinson, C., & 8 othersJournot, L., Postlethwait, J. H., Braasch, I., Trifonov, V., Warren, W. C., Meyer, A., Guiguen, Y. & Schartl, M., 1 Jun 2020, In: Nature Ecology and Evolution. 4, 6, p. 841-852 12 p.

    Research output: Contribution to journal › Article › peer-review

  26. A draft genome assembly of spotted hyena, Crocuta crocuta

    Yang, C., Li, F., Xiong, Z., Koepfli, K. P., Ryder, O., Perelman, P., Li, Q. & Zhang, G., 28 Apr 2020, In: Scientific Data. 7, 1, 10 p., 126.

    Research output: Contribution to journal › Article › peer-review

  27. Chromosome painting does not support a sex chromosome turnover in lacerta agilis linnaeus, 1758

    Lisachov, A. P., Giovannotti, M., Pereira, J. C., Andreyushkova, D. A., Romanenko, S. A., Ferguson-Smith, M. A., Borodin, P. M. & Trifonov, V. A., 1 Apr 2020, In: Cytogenetic and Genome Research. 160, 3, p. 134-140 7 p.

    Research output: Contribution to journal › Article › peer-review

  28. Complex Structure of Lasiopodomys mandarinus vinogradovi Sex Chromosomes, Sex Determination, and Intraspecific Autosomal Polymorphism

    Romanenko, S. A., Smorkatcheva, A. V., Kovalskaya, Y. M., Prokopov, D. Y., Lemskaya, N. A., Gladkikh, O. L., Polikarpov, I. A., Serdyukova, N. A., Trifonov, V. A., Molodtseva, A. S., O'Brien, P. C. M., Golenishchev, F. N., Ferguson-Smith, M. A. & Graphodatsky, A. S., Apr 2020, In: Genes. 11, 4, 17 p., 374.

    Research output: Contribution to journal › Article › peer-review

  29. Genes containing long introns occupy series of bands and interbands in drosophila melanogaster polytene chromosomes

    Khoroshko, V. A., Pokholkova, G. V., Levitsky, V. G., Zykova, T. Y., Antonenko, O. V., Belyaeva, E. S. & Zhimulev, I. F., Apr 2020, In: Genes. 11, 4, 32 p., 417.

    Research output: Contribution to journal › Article › peer-review

  30. Faint gray bands in Drosophila melanogaster polytene chromosomes are formed by coding sequences of housekeeping genes

    Demakova, O. V., Demakov, S. A., Boldyreva, L. V., Zykova, T. Y., Levitsky, V. G., Semeshin, V. F., Pokholkova, G. V., Sidorenko, D. S., Goncharov, F. P., Belyaeva, E. S. & Zhimulev, I. F., 1 Mar 2020, In: Chromosoma. 129, 1, p. 25-44 20 p.

    Research output: Contribution to journal › Article › peer-review

  31. Challenges and Prospects of Chimeric Antigen Receptor T-cell Therapy for Metastatic Prostate Cancer

    Gorchakov, A. A., Kulemzin, S. V., Kochneva, G. V. & Taranin, A. V., Mar 2020, In: European Urology. 77, 3, p. 299-308 10 p.

    Research output: Contribution to journal › Review article › peer-review

  32. Shp-2 gene knockout upregulates CAR-driven cytotoxicity of YT NK cells

    Subrakova, V. G., Kulemzin, S. V., Belovezhets, T. N., Chikaev, A. N., Chikaev, N. A., Koval, O. A., Gorchakov, A. A. & Taranin, A. V., 1 Jan 2020, In: Вавиловский журнал генетики и селекции. 24, 1, p. 80-86 7 p.

    Research output: Contribution to journal › Article › peer-review

  33. Stratification of papillary thyroid cancer relapse risk based on the results of molecular genetic studies

    Lukyanov, S., Sergiyko, S. V., Titov, S., Reshetov, I. V., Veryaskina, Y., Vazhenin, A. V., Gostimsky, A. V., Ippolitov, L. I. & Rogova, M. O., 1 Jan 2020, In: Opuholi Golovy i Sei. 10, 1, p. 93-100 8 p.

    Research output: Contribution to journal › Article › peer-review

  34. Комбинированная терапия рака на основе онколитической виротерапии и таргетной CAR T/NK-клеточной иммунотерапии

    Kochneva, G. V., Sivolobova, G. F., Tkacheva, A. V., Gorchakov, A. A. & Kulemzin, S. V., 1 Jan 2020, In: Molekuliarnaia biologiia. 54, 1, p. 3-16 14 p.

    Research output: Contribution to journal › Review article › peer-review

  35. Combination of Oncolytic Virotherapy and CAR T/NK Cell Therapy for the Treatment of Cancer

    Kochneva, G., Sivolobova, G. F., Tkacheva, A., Gorchakov, A. A. & Kulemzin, S., Jan 2020, In: Molecular Biology. 54, 1, p. 1-12 12 p.

    Research output: Contribution to journal › Review article › peer-review

  36. Возможности дифференциальной диагностики рака желудка и предраковых изменений слизистой желудка с помощью анализа экспрессии шести микроРНК

    Titov, S. E., Anishchenko, V. V., Poloz, T. L., Veryaskina, Y. A., Arkhipova, A. A. & Ustinov, S. N., 2020, In: Клиническая лабораторная диагностика. 65, 2, p. 131-136 6 p.

    Research output: Contribution to journal › Article › peer-review

  37. Дооперационное выявление метастазов папиллярного и медуллярного рака щитовидной железы в шейных лимфатических узлах с помощью молекулярного классификатора

    Titov, S. E., Katanyan, G. A., Poloz, T. L., Izmaylova, L. G., Zentsova, O. A., Dryaeva, L. G. & Anishchenko, V. V., 2020, In: Opuholi Golovy i Sei. 10, 4, p. 50-59 10 p., 6.

    Research output: Contribution to journal › Article › peer-review

  38. 2019

  39. Prostate cancer surface targets for car T cell therapy or metastatic prostate cancer in the car T cell era: My kingdom for the target!

    Kulemzin, S. V., Gorchakov, A. A. & Taranin, A. V., 1 Nov 2019, In: Cellular Therapy and Transplantation. 8, 4, p. 19-28 10 p.

    Research output: Contribution to journal › Review article › peer-review

  40. Comparative chromosome mapping of musk Ox and the X chromosome among some bovidae species

    Proskuryakova, A. A., Kulemzina, A. I., Perelman, P. L., Yudkin, D. V., Lemskaya, N. A., Okhlopkov, I. M., Kirillin, E. V., Farré, M., Larkin, D. M., Roelke-Parker, M. E., O’Brien, S. J., Bush, M. & Graphodatsky, A. S., 29 Oct 2019, In: Genes. 10, 11, 14 p., 857.

    Research output: Contribution to journal › Article › peer-review

  41. A simple way to increase recovery of the expressed VH and VL genes in single-sorted human B cells

    Guselnikov, S. V., Belovezhets, T. N., Kulemzin, S. V., Gorchakov, A. A. & Taranin, A. V., 1 Oct 2019, In: BioTechniques. 67, 4, p. 184-187 4 p.

    Research output: Contribution to journal › Article › peer-review

  42. Chromosome Translocations as a Driver of Diversification in Mole Voles Ellobius (Rodentia, Mammalia)

    Romanenko, S. A., Lyapunova, E. A., Saidov, A. S., O'Brien, P. C. M., Serdyukova, N. A., Ferguson-Smith, M. A., Graphodatsky, A. S. & Bakloushinskaya, I., 2 Sept 2019, In: International Journal of Molecular Sciences. 20, 18, 13 p., 4466.

    Research output: Contribution to journal › Article › peer-review

  43. RNAi-mediated depletion of the NSL complex subunits leads to abnormal chromosome segregation and defective centrosome duplication in Drosophila mitosis

    Pavlova, G. A., Popova, J. V., Andreyeva, E. N., Yarinich, L. A., Lebedev, M. O., Razuvaeva, A. V., Dubatolova, T. D., Oshchepkova, A. L., Pellacani, C., Somma, M. P., Pindyurin, A. V. & Gatti, M., 1 Sept 2019, In: PLoS Genetics. 15, 9, p. e1008371 28 p., e1008371.

    Research output: Contribution to journal › Article › peer-review

  44. An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)

    Farré, M., Li, Q., Darolti, I., Zhou, Y., Damas, J., Proskuryakova, A. A., Kulemzina, A. I., Chemnick, L. G., Kim, J., Ryder, O. A., Ma, J., Graphodatsky, A. S., Zhang, G., Larkin, D. M. & Lewin, H. A., 1 Aug 2019, In: GigaScience. 8, 8, 9 p., giz090.

    Research output: Contribution to journal › Article › peer-review

  45. Precision nomenclature for the new genomics

    Lewin, H. A., Graves, J. A. M., Ryder, O. A., Graphodatsky, A. S. & O'Brien, S. J., 1 Aug 2019, In: GigaScience. 8, 8, 3 p., giz086.

    Research output: Contribution to journal › Review article › peer-review

  46. Optimized PCR conditions minimizing the formation of chimeric DNA molecules from MPRA plasmid libraries

    Omelina, E. S., Ivankin, A. V., Letiagina, A. E. & Pindyurin, A. V., 11 Jul 2019, In: BMC Genomics. 20, Suppl 7, p. 536 10 p., 536.

    Research output: Contribution to journal › Article › peer-review

  47. Publisher Correction: The role of Patronin in Drosophila mitosis

    Pavlova, G. A., Razuvaeva, A. V., Popova, J. V., Andreyeva, E. N., Yarinich, L. A., Lebedev, M. O., Pellacani, C., Bonaccorsi, S., Somma, M. P., Gatti, M. & Pindyurin, A. V., 8 Jul 2019, In: BMC Molecular and Cell Biology. 20, 1, p. 24 1 p., 24.

    Research output: Contribution to journal › Comment/debate › peer-review

  48. Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary

    Elbers, J. P., Rogers, M. F., Perelman, P. L., Proskuryakova, A. A., Serdyukova, N. A., Johnson, W. E., Horin, P., Corander, J., Murphy, D. & Burger, P. A., 1 Jul 2019, In: Molecular Ecology Resources. 19, 4, p. 1015-1026 12 p.

    Research output: Contribution to journal › Article › peer-review

  49. Rapid chromosomal evolution in enigmatic mammal with XX in both sexes, the Alay mole vole Ellobius alaicus Vorontsov et al., 1969 (Mammalia, Rodentia)

    Bakloushinskaya, I., Lyapunova, E. A., Saidov, A. S., Romanenko, S. A., O'Brien, P. C. M., Serdyukova, N. A., Ferguson-Smith, M. A., Matveevsky, S. & Bogdanov, A. S., 20 Jun 2019, In: Comparative Cytogenetics. 13, 2, p. 147-177 31 p.

    Research output: Contribution to journal › Article › peer-review

  50. Unraveling the LRC Evolution in Mammals: IGSF1 and A1BG Provide the Keys

    Guselnikov, S. V. & Taranin, A. V., 24 May 2019, In: Genome Biology and Evolution. 11, 6, p. 1586-1601 16 p., evz102.

    Research output: Contribution to journal › Article › peer-review

  51. Poly(ADP-ribosyl)ation and DNA repair synthesis in the extracts of naked mole rat, mouse, and human cells

    Kosova, A. A., Kutuzov, M. M., Evdokimov, A. N., Ilina, E. S., Belousova, E. A., Romanenko, S. A., Trifonov, V. A., Khodyreva, S. N. & Lavrik, O. I., 15 May 2019, In: Aging. 11, 9, p. 2852-2873 22 p.

    Research output: Contribution to journal › Article › peer-review

  52. Gene dunce Localization in the Polytene Chromosome of Drosophila melanogaster Long Span Batch of Adjacent Chromosomal Structures

    Khoroshko, V. A., Pokholkova, G. V., Zykova, T. Y., Osadchiy, I. S. & Zhimulev, I. F., 1 May 2019, In: Doklady Biochemistry and Biophysics. 484, 1, p. 55-58 4 p.

    Research output: Contribution to journal › Article › peer-review

  53. Anti-Idiotypic Monoclonal Antibodies Targeting the Germline Variant of a Broadly Neutralizing HIV-Specific Antibody VRC01

    Gorchakov, A. A., Volkova, O. Y., Baranov, K. O., Chernikova, D. S., Mechetina, L. V., Belovezhets, T. N., Chikaev, N. A., Kulemzin, S. V. & Taranin, A. V., 22 Apr 2019, In: Molecular Therapy. 27, 4, p. 143-144 2 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  54. The role of Patronin in Drosophila mitosis

    Pavlova, G. A., Razuvaeva, A. V., Popova, J. V., Andreyeva, E. N., Yarinich, L. A., Lebedev, M. O., Pellacani, C., Bonaccorsi, S., Somma, M. P., Gatti, M. & Pindyurin, A. V., 17 Apr 2019, In: BMC Molecular and Cell Biology. 20, Suppl 1, p. 7 13 p., 7.

    Research output: Contribution to journal › Article › peer-review

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