1. 2019
  2. Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks

    Farré, M., Kim, J., Proskuryakova, A. A., Zhang, Y., Kulemzina, A. I., Li, Q., Zhou, Y., Xiong, Y., Johnson, J. L., Perelman, P. L., Johnson, W. E., Warren, W. C., Kukekova, A. V., Zhang, G., O’Brien, S. J., Ryder, O. A., Graphodatsky, A. S., Ma, J., Lewin, H. A. & Larkin, D. M., 1 Apr 2019, In: Genome Research. 29, 4, p. 576-589 14 p.

    Research output: Contribution to journalArticlepeer-review

  3. A toolset to study functions of Cytosolic non-specific dipeptidase 2 (CNDP2) using Drosophila as a model organism

    Andreyeva, E. N., Ogienko, A. A., Dubatolova, T. D., Oshchepkova, A. L., Kozhevnikova, E. N., Ivankin, A. V., Pavlova, G. A., Kopyl, S. A. & Pindyurin, A. V., 18 Mar 2019, In: BMC Genetics. 20, Suppl 1, p. 31 9 p., 31.

    Research output: Contribution to journalArticlepeer-review

  4. Design and analysis of stably integrated reporters for inducible transgene expression in human T cells and CAR NK-cell lines

    Kulemzin, S. V., Matvienko, D. A., Sabirov, A. H., Sokratyan, A. M., Chernikova, D. S., Belovezhets, T. N., Chikaev, A. N., Taranin, A. V. & Gorchakov, A. A., 13 Mar 2019, In: BMC Medical Genomics. 12, Suppl 2, p. 44 9 p., 44.

    Research output: Contribution to journalArticlepeer-review

  5. Architecture of Promoters of House-Keeping Genes in Polytene Chromosome Interbands of Drosophila melanogaster

    Zykova, T. Y., Levitsky, V. G. & Zhimulev, I. F., 1 Mar 2019, In: Doklady Biochemistry and Biophysics. 485, 1, p. 95-100 6 p.

    Research output: Contribution to journalArticlepeer-review

  6. First report on B chromosome content in a reptilian species: the case of Anolis carolinensis

    Kichigin, I. G., Lisachov, A. P., Giovannotti, M., Makunin, A. I., Kabilov, M. R., O’Brien, P. C. M., Ferguson-Smith, M. A., Graphodatsky, A. S. & Trifonov, V. A., 11 Feb 2019, In: Molecular Genetics and Genomics. 294, 1, p. 13-21 9 p.

    Research output: Contribution to journalArticlepeer-review

  7. Population genetic structure and phylogeography of sterlet (Acipenser ruthenus, Acipenseridae) in the Ob and Yenisei river basins

    Pobedintseva, M. A., Makunin, A. I., Kichigin, I. G., Kulemzina, A. I., Serdyukova, N. A., Romanenko, S. A., Vorobieva, N. V., Interesova, E. A., Korentovich, M. A., Zaytsev, V. F., Mischenko, A. V., Zadelenov, V. A., Yurchenko, A. A., Sherbakov, D. Y., Graphodatsky, A. S. & Trifonov, V. A., 2 Jan 2019, In: Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis. 30, 1, p. 156-164 9 p.

    Research output: Contribution to journalArticlepeer-review

  8. Cytogenetic and molecular characteristics of rye genome in octoploid triticale (× Triticosecale Wittmack)

    Evtushenko, E. V., Lipikhina, Y. A., Stepochkin, P. I. & Vershinin, A. V., 1 Jan 2019, In: Comparative Cytogenetics. 13, 4, p. 423-434 12 p., 9576.

    Research output: Contribution to journalArticlepeer-review

  9. Generation of barcoded plasmid libraries for massively parallel analysis of chromatin position effects

    Lebedev, M. O., Yarinich, L. A., Ivankin, A. V. & Pindyurin, A. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 2, p. 203-211 9 p.

    Research output: Contribution to journalArticlepeer-review

  10. Non3 is an essential drosophila gene required for proper nucleolus assembly

    Andreyeva, E. N., Ogienko, A. A., Yushkova, A. A., Popova, J. V., Pavlova, G. A., Kozhevnikova, E. N., Ivankin, A. V., Gatti, M. & Pindyurin, A. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 2, p. 190-198 9 p.

    Research output: Contribution to journalArticlepeer-review

  11. Optogenetic regulation of endogenous gene transcription in mammals

    Omelina, E. S. & Pindyurin, A. V., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 2, p. 219-225 7 p.

    Research output: Contribution to journalArticlepeer-review

  12. The problems of genetic support of dividing the black kite (Milvus migrans) into subspecies

    Andreyenkova, N. G., Starikov, I. J., Wink, M., Karyakin, I. V., Andreyenkov, O. V. & Zhimulev, I. F., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 2, p. 226-231 6 p.

    Research output: Contribution to journalArticlepeer-review

  13. 2018
  14. A combined banding method that allows the reliable identification of chromosomes as well as differentiation of AT- and GC-rich heterochromatin

    Lemskaya, N. A., Kulemzina, A. I., Beklemisheva, V. R., Biltueva, L. S., Proskuryakova, A. A., Hallenbeck, J. M., Perelman, P. L. & Graphodatsky, A. S., 1 Dec 2018, In: Chromosome Research. 26, 4, p. 307-315 9 p.

    Research output: Contribution to journalArticlepeer-review

  15. New slbo-Gal4 driver lines for the analysis of border cell migration during Drosophila oogenesis

    Ogienko, A. A., Yarinich, L. A., Fedorova, E. V., Lebedev, M. O., Andreyeva, E. N., Pindyurin, A. V. & Baricheva, E. M., 1 Dec 2018, In: Chromosoma. 127, 4, p. 475-487 13 p.

    Research output: Contribution to journalArticlepeer-review

  16. Genetic Organization of Open Chromatin Domains Situated in Polytene Chromosome Interbands in Drosophila

    Zykova, T. Y., Popova, O. O., Khoroshko, V. A., Levitsky, V. G., Lavrov, S. A. & Zhimulev, I. F., 1 Nov 2018, In: Doklady Biochemistry and Biophysics. 483, 1, p. 297-301 5 p.

    Research output: Contribution to journalArticlepeer-review

  17. The large fraction of heterochromatin in Drosophila neurons is bound by both B-type lamin and HP1a

    Pindyurin, A. V., Ilyin, A. A., Ivankin, A. V., Tselebrovsky, M. V., Nenasheva, V. V., Mikhaleva, E. A., Pagie, L., van Steensel, B. & Shevelyov, Y. Y., 1 Nov 2018, In: Epigenetics & chromatin. 11, 1, p. 65 17 p., 65.

    Research output: Contribution to journalArticlepeer-review

  18. Multiple intrasyntenic rearrangements and rapid speciation in voles

    Romanenko, S. A., Serdyukova, N. A., Perelman, P. L., Trifonov, V. A., Golenishchev, F. N., Bulatova, N. S., Stanyon, R. & Graphodatsky, A. S., 8 Oct 2018, In: Scientific Reports. 8, 1, p. 14980 9 p., 14980.

    Research output: Contribution to journalArticlepeer-review

  19. The rRNA Gene Containing Marker Chromosome Associated with a Intellectual Disability: A Clinical Case Report

    Telepova, A. S., Romanenko, S. A., Lemskaya, N. A., Maksimova, Y. V., Shorina, A. R. & Yudkin, D. V., 1 Oct 2018, In: Molecular Genetics, Microbiology and Virology. 33, 4, p. 241-244 4 p.

    Research output: Contribution to journalArticlepeer-review

  20. B chromosomes of the asian seabass (Lates calcarifer) contribute to genome variations at the level of individuals and populations

    Komissarov, A., Vij, S., Yurchenko, A., Trifonov, V., Thevasagayam, N., Saju, J., Sridatta, P. S. R., Purushothaman, K., Graphodatsky, A., Orbán, L. & Kuznetsova, I., 20 Sept 2018, In: Genes. 9, 10, p. 1.-15 15 p., 464.

    Research output: Contribution to journalArticlepeer-review

  21. Author Correction: Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours

    Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., Kharlamova, A. V., Herbeck, Y., Serdyukova, N. A., Xiong, Z., Beklemischeva, V., Koepfli, K. P., Gulevich, R. G., Vladimirova, A. V., Hekman, J. P., Perelman, P. L., Graphodatsky, A. S., O’Brien, S. J., Wang, X., Clark, A. G., & 3 othersAcland, G. M., Trut, L. N. & Zhang, G., 1 Sept 2018, In: Nature Ecology and Evolution. 2, 9, p. 1514-1514 1 p.

    Research output: Contribution to journalComment/debatepeer-review

  22. New Haplotypes of the Mitochondrial Gene CytB in the Nesting Population of the Siberian Black Kite Milvus migrans lineatus Gray, 1831 in the Territory of the Republic of Tyva

    Andreyenkova, N. G., Andreyenkov, O. V., Karyakin, I. V. & Zhimulev, I. F., 1 Sept 2018, In: Doklady Biochemistry and Biophysics. 482, 1, p. 242-244 3 p.

    Research output: Contribution to journalArticlepeer-review

  23. Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours

    Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., Kharlamova, A. V., Herbeck, Y., Serdyukova, N. A., Xiong, Z., Beklemischeva, V., Koepfli, K. P., Gulevich, R. G., Vladimirova, A. V., Hekman, J. P., Perelman, P. L., Graphodatsky, A. S., O’Brien, S. J., Wang, X., Clark, A. G., & 3 othersAcland, G. M., Trut, L. N. & Zhang, G., 1 Sept 2018, In: Nature Ecology and Evolution. 2, 9, p. 1479-1491 13 p.

    Research output: Contribution to journalArticlepeer-review

  24. First cytogenetic analysis of lesser gymnures (Mammalia, Galericidae, Hylomys) from Vietnam

    Pavlova, S. V., Biltueva, L. S., Romanenko, S. A., Lemskaya, N. A., Shchinov, A. V., Abramov, A. V. & Rozhnov, V. V., 23 Aug 2018, In: Comparative Cytogenetics. 12, 3, p. 361-372 12 p.

    Research output: Contribution to journalArticlepeer-review

  25. Pinniped karyotype evolution substantiated by comparative chromo-some painting of 10 pinniped species (Pinnipedia, Carnivora)

    Beklemisheva, V. R., Perelman, P. L., Lemskaya, N. A., Kulemzina, A. I., Proskuryakova, A. A., Burkanov, V. N., O'Brien, S. J. & Graphodatsky, A. S., 16 Aug 2018, In: Comparative Cytogenetics. 12, 3, p. 306-307 2 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  26. Sequencing of supernumerary chromosomes of red fox and raccoon dog confirms a non-random gene acquisition by B chromosomes

    Makunin, A. I., Romanenko, S. A., Beklemisheva, V. R., Perelman, P. L., Druzhkova, A. S., Petrova, K. O., Prokopov, D. Y., Chernyaeva, E. N., Johnson, J. L., Kukekova, A. V., Yang, F., Ferguson-Smith, M. A., Graphodatsky, A. S. & Trifonov, V. A., 10 Aug 2018, In: Genes. 9, 8, 14 p., 405.

    Research output: Contribution to journalArticlepeer-review

  27. B cell-specific protein FCRLA is expressed by plasmacytoid dendritic cells in humans

    Reshetnikova, E., Guselnikov, S., Volkova, O., Baranov, K., Taranin, A. & Mechetina, L., 1 Jul 2018, In: Cytometry Part B - Clinical Cytometry. 94, 4, p. 683-687 5 p.

    Research output: Contribution to journalArticlepeer-review

  28. The case of X and Y localization of nucleolus organizer regions (NORs) in tragulus javanicus (Cetartiodactyla, Mammalia)

    Proskuryakova, A. A., Kulemzina, A. I., Perelman, P. L., Serdukova, N. A., Ryder, O. A. & Graphodatsky, A. S., 20 Jun 2018, In: Genes. 9, 6, 8 p., 312.

    Research output: Contribution to journalArticlepeer-review

  29. Ultrastructural analysis of mitotic Drosophila S2 cells identifies distinctive microtubule and intracellular membrane behaviors

    Strunov, A., Boldyreva, L. V., Andreyeva, E. N., Pavlova, G. A., Popova, J. V., Razuvaeva, A. V., Anders, A. F., Renda, F., Pindyurin, A. V., Gatti, M. & Kiseleva, E., 15 Jun 2018, In: BMC Biology. 16, 1, p. 68 21 p., 68.

    Research output: Contribution to journalArticlepeer-review

  30. Diversity of immunoglobulin light chain genes in non-teleost ray-finned fish uncovers IgL subdivision into five ancient isotypes

    Guselnikov, S. V., Baranov, K. O., Najakshin, A. M., Mechetina, L. V., Chikaev, N. A., Makunin, A. I., Kulemzin, S. V., Andreyushkova, D. A., Stöck, M., Wuertz, S., Gessner, J., Warren, W. C., Schartl, M., Trifonov, V. A. & Taranin, A. V., 28 May 2018, In: Frontiers in Immunology. 9, MAY, p. 1079 15 p., 1079.

    Research output: Contribution to journalArticlepeer-review

  31. Chromosome synapsis and recombination in male-sterile and female-fertile interspecies hybrids of the dwarf hamsters (Phodopus, cricetidae)

    Bikchurina, T. I., Tishakova, K. V., Kizilova, E. A., Romanenko, S. A., Serdyukova, N. A., Torgasheva, A. A. & Borodin, P. M., 25 Apr 2018, In: Genes. 9, 5, 15 p., 227.

    Research output: Contribution to journalArticlepeer-review

  32. Similarity in replication timing between polytene and diploid cells is associated with the organization of the drosophila genome

    Kolesnikova, T. D., Goncharov, F. P. & Zhimulev, I. F., 16 Apr 2018, In: PLoS ONE. 13, 4, p. e0195207 33 p., 0195207.

    Research output: Contribution to journalArticlepeer-review

  33. Genome-wide analysis of gene regulation mechanisms during Drosophila spermatogenesis

    Laktionov, P. P., Maksimov, D. A., Romanov, S. E., Antoshina, P. A., Posukh, O. V., White-Cooper, H., Koryakov, D. E. & Belyakin, S. N., 2 Apr 2018, In: Epigenetics and Chromatin. 11, 1, 15 p., 14.

    Research output: Contribution to journalArticlepeer-review

  34. Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing

    Pokholkova, G. V., Demakov, S. A., Andreenkov, O. V., Andreenkova, N. G., Volkova, E. I., Belyaeva, E. S. & Zhimulev, I. F., 1 Apr 2018, In: PLoS ONE. 13, 4, p. e0192634 24 p., e0192634.

    Research output: Contribution to journalArticlepeer-review

  35. Polytene chromosomes – A portrait of functional organization of drosophila genome

    Zykova, T. Y., Levitsky, V. G., Belyaeva, E. S. & Zhimulev, I. F., Apr 2018, In: Current Genomics. 19, 3, p. 179-191 13 p.

    Research output: Contribution to journalReview articlepeer-review

  36. Border Structure of Intercalary Heterochromatin Bands of Drosophila melanogaster Polytene Chromosomes

    Khoroshko, V. A., Zykova, T. Y., Popova, O. O. & Zhimulev, I. F., 1 Mar 2018, In: Doklady Biochemistry and Biophysics. 479, 1, p. 114-117 4 p.

    Research output: Contribution to journalArticlepeer-review

  37. Genome-wide analysis of SU(VAR)3-9 distribution in chromosomes of Drosophila melanogaster

    Maksimov, D. A., Laktionov, P. P., Posukh, O. V., Belyakin, S. N. & Koryakov, D. E., 1 Mar 2018, In: Chromosoma. 127, 1, p. 85-102 18 p.

    Research output: Contribution to journalArticlepeer-review

  38. Radiobiological response of U251MG, CHO-K1 and V79 cell lines to accelerator-based boron neutron capture therapy

    Sato, E., Zaboronok, A., Yamamoto, T., Nakai, K., Taskaev, S., Volkova, O., Mechetina, L., Taranin, A., Kanygin, V., Isobe, T., Mathis, B. J. & Matsumura, A., 1 Mar 2018, In: Journal of Radiation Research. 59, 2, p. 101-107 7 p.

    Research output: Contribution to journalArticlepeer-review

  39. Rapid emergence of independent "chromosomal lineages" in silvered-leaf monkey triggered by Y/autosome translocation

    Capozzi, O., Stanyon, R., Archidiacono, N., Ishida, T., Romanenko, S. A. & Rocchi, M., 19 Feb 2018, In: Scientific Reports. 8, 1, p. 3250 9 p., 3250.

    Research output: Contribution to journalArticlepeer-review

  40. VEGFR2-specific FnCAR effectively redirects the cytotoxic activity of T cells and YT NK cells

    Kulemzin, S. V., Gorchakov, A. A., Chikaev, A. N., Kuznetsova, V. V., Volkova, O. Y., Matvienko, D. A., Petukhov, A. V., Zaritskey, A. Y. & Taranin, A. V., 6 Feb 2018, In: Oncotarget. 9, 10, p. 9021-9029 9 p.

    Research output: Contribution to journalArticlepeer-review

  41. Construction of two whole genome radiation hybrid panels for dromedary (Camelus dromedarius): 5000RAD and 15000RAD

    Perelman, P. L., Pichler, R., Gaggl, A., Larkin, D. M., Raudsepp, T., Alshanbari, F., Holl, H. M., Brooks, S. A., Burger, P. A. & Periasamy, K., 31 Jan 2018, In: Scientific Reports. 8, 1, p. 1982 9 p., 1982.

    Research output: Contribution to journalArticlepeer-review

  42. Analysis of in vitro activity of PSCA-specific CARs in the context of human NK cell line YT

    Matvienko, D. A., Kulemzin, S. V., Smagina, A. S., Belovezhets, T. N., Chikaev, A. N., Volkova, O. Y., Chikaev, N. A., Koval, O. A., Kuligina, E. V., Taranin, A. V. & Gorchakov, A. A., 1 Jan 2018, In: Cellular Therapy and Transplantation. 7, 2, p. 70-77 8 p.

    Research output: Contribution to journalArticlepeer-review

  43. Analysis of in vitro cytotoxicity of human nk cell line co-expressing a psma-specific car and an antitumor agent lactaptin

    Belovezhets, T. N., Matvienko, D. A., Volkova, O. Y., Koval, O. A., Tkachenko, A. V., Kuligina, E. V., Taranin, A. V. & Richter, V. A., 1 Jan 2018, In: Genes and Cells. 13, 3, p. 89-93 5 p.

    Research output: Contribution to journalArticlepeer-review

  44. Направленное редактирование генома Drosophila melanogaster

    Белякин, С. Н. & Максимов, Д. А., 2018, Редактирование генов и геномов. Новосибирск: ФГУП "Издательство СО РАН", Vol. 2. p. 177-192 16 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterResearchpeer-review

  45. 2017
  46. De novo assembling and primary analysis of genome and transcriptome of gray whale Eschrichtius robustus

    Moskalev, A. A., Kudryavtseva, A. V., Graphodatsky, A. S., Beklemisheva, V. R., Serdyukova, N. A., Krutovsky, K. V., Sharov, V. V., Kulakovskiy, I. V., Lando, A. S., Kasianov, A. S., Kuzmin, D. A., Putintseva, Y. A., Feranchuk, S. I., Shaposhnikov, M. V., Fraifeld, V. E., Toren, D., Snezhkina, A. V. & Sitnik, V. V., 28 Dec 2017, In: BMC Evolutionary Biology. 17, Suppl 2, p. 258 9 p., 258.

    Research output: Contribution to journalArticlepeer-review

  47. Functional dissection of Drosophila melanogaster SUUR protein influence on H3K27me3 profile

    Posukh, O. V., Maksimov, D. A., Laktionov, P. P., Koryakov, D. E. & Belyakin, S. N., 1 Dec 2017, In: Epigenetics and Chromatin. 10, 1, p. 56 14 p., 56.

    Research output: Contribution to journalArticlepeer-review

  48. X chromosome evolution in cetartiodactyla

    Proskuryakova, A. A., Kulemzina, A. I., Perelman, P. L., Makunin, A. I., Larkin, D. M., Farré, M., Kukekova, A. V., Lynn Johnson, J., Lemskaya, N. A., Beklemisheva, V. R., Roelke-Parker, M. E., Bellizzi, J., Ryder, O. A., O’Brien, S. J. & Graphodatsky, A. S., 31 Aug 2017, In: Genes. 8, 9, 16 p., 216.

    Research output: Contribution to journalArticlepeer-review

  49. Intrachromosomal rearrangements in rodents from the perspective of comparative region-specific painting

    Romanenko, S. A., Serdyukova, N. A., Perelman, P. L., Pavlova, S. V., Bulatova, N. S., Golenishchev, F. N., Stanyon, R. & Graphodatsky, A. S., 30 Aug 2017, In: Genes. 8, 9, 10 p., 215.

    Research output: Contribution to journalArticlepeer-review

  50. Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells

    Ilyin, A. A., Ryazansky, S. S., Doronin, S. A., Olenkina, O. M., Mikhaleva, E. A., Yakushev, E. Y., Abramov, Y. A., Belyakin, S. N., Ivankin, A. V., Pindyurin, A. V., Gvozdev, V. A., Klenov, M. S. & Shevelyov, Y. Y., 1 Jul 2017, In: Nucleic Acids Research. 45, 13, p. 7666-7680 15 p.

    Research output: Contribution to journalArticlepeer-review

  51. Whole Genome Duplications in Vertebrate Evolution

    Trifonov, V. A., Makunin, A. I., Romanenko, S. A., Biltueva, L. S., Beklemisheva, V. R., Pobedintseva, M. A., Prokopov, D. Y., Andreyushkova, D. A. & Graphodatsky, A. S., 29 Jun 2017, In: Molecular Cytogenetics. 10, 2 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  52. CAR T-cell therapy: Balance of efficacy and safety

    Kulemzin, S. V., Kuznetsova, V. V., Mamonkin, M., Taranin, A. V. & Gorchakov, A. A., 1 Mar 2017, In: Molecular Biology. 51, 2, p. 237-250 14 p.

    Research output: Contribution to journalReview articlepeer-review

  53. Comparative analysis of lactaptin activity when produced in bacterial or eukaryotic expression systems

    Koval, O. A., Volkova, O. Y., Gorchakov, A. A., Kulemzin, S. V., Tkachenko, A. V., Nushtaeva, A. A., Kuligina, E. V., Richter, V. A. & Taranin, A. V., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 7, p. 764-769 6 p.

    Research output: Contribution to journalArticlepeer-review

ID: 3086260