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  1. 2023

  2. Computable Stone spaces

    Bazhenov, N., Harrison-Trainor, M. & Melnikov, A., 1 Oct 2023, In: Annals of Pure and Applied Logic. 174, 9, 25 p., 103304.

    Research output: Contribution to journal › Article › peer-review

  3. BGRS: bioinformatics of genome regulation and data integration

    Orlov, Y. L., Chen, M., Kolchanov, N. A. & Hofestädt, R., 1 Sept 2023, In: Journal of integrative bioinformatics. 20, 3, 20230032.

    Research output: Contribution to journal › Article › peer-review

  4. Task-driven approach to artificial intelligence

    Vityaev, E. E., Goncharov, S. S. & Sviridenko, D. I., Sept 2023, In: Cognitive Systems Research. 81, p. 50-56 7 p.

    Research output: Contribution to journal › Article › peer-review

  5. Decompositions in Semirings

    Batueva, T. C. D. & Schwidefsky, M. V., Jul 2023, In: Siberian Mathematical Journal. 64, 4, p. 836-846 11 p.

    Research output: Contribution to journal › Article › peer-review

  6. Lower Semilattices of Separable Congruences of Numbered Algebras

    Kasymov, N. K. & Morozov, A. S., Jul 2023, In: Siberian Mathematical Journal. 64, 4, p. 864-876 13 p.

    Research output: Contribution to journal › Article › peer-review

  7. Research Topics of the Bioinformatics of Gene Regulation

    Orlov, Y. L., Anashkina, A. A., Kumeiko, V. V., Chen, M. & Kolchanov, N. A., 15 May 2023, In: International Journal of Molecular Sciences. 24, 10, 8774.

    Research output: Contribution to journal › Article › peer-review

  8. Families of Permutations and Ideals of Turing Degrees

    Morozov, A. S., Puzarenko, V. G. & Faizrachmanov, M. K., Jan 2023, In: Algebra and Logic. 61, 6, p. 481-490 10 p.

    Research output: Contribution to journal › Article › peer-review

  9. Brain Principles Programming

    Vityaev, E., Kolonin, A., Kurpatov, A. & Molchanov, A., 2023, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Science and Business Media Deutschland GmbH, p. 424-433 10 p. 41. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13539 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  10. Centroid Hom-associative Algebras and Centroid Hom-Lie Algebras

    Bai, Y. X., Bokut, L. A., Chen, Y. Q. & Zhang, Z. R., 2023, In: Acta Mathematica Sinica, English Series. 27 p.

    Research output: Contribution to journal › Article › peer-review

  11. Generalized Computable Models and Montague Semantics

    Burnistov, A. & Stukachev, A., 2023, Studies in Computational Intelligence. Springer Science and Business Media Deutschland GmbH, p. 107-124 18 p. 5. (Studies in Computational Intelligence; vol. 1081).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research › peer-review

  12. Gröbner–Shirshov basis theory and word problems for metatrivial Poisson algebras

    Bokut, L. A., Chen, Y. & Zhang, Z., 2023, In: Sao Paulo Journal of Mathematical Sciences. 29 p.

    Research output: Contribution to journal › Article › peer-review

  13. Profinite Locally Finite Quasivarieties

    Nurakunov, A. M. & Schwidefsky, M. V., 2023, In: Studia Logica. 25 p.

    Research output: Contribution to journal › Article › peer-review

  14. Quasivariety generated by the suborder lattice. I. Equational bases

    Kadyrova, O. A. & Schwidefsky, M. V., 2023, In: Siberian Electronic Mathematical Reports. 20, 1, p. 62-71 10 p.

    Research output: Contribution to journal › Article › peer-review

  15. The complexity of quasivariety lattices. II

    Schwidefsky, M. V., 2023, In: Siberian Electronic Mathematical Reports. 20, 1, p. 501-513 13 p.

    Research output: Contribution to journal › Article › peer-review

  16. 2022

  17. On Weakly Holographic Structures

    Kasymkhanuly, B. & Morozov, A. S., Nov 2022, In: Siberian Mathematical Journal. 63, 6, p. 1091-1101 11 p.

    Research output: Contribution to journal › Article › peer-review

  18. Editorial: High-Throughput Sequencing-Based Investigation of Chronic Disease Markers and Mechanisms

    Orlov, Y. L., Chen, W. L., Sekacheva, M. I., Cai, G. & Li, H., 21 Jun 2022, In: Frontiers in Genetics. 13, 922206.

    Research output: Contribution to journal › Editorial › peer-review

  19. Inner Constructivizability of Functional Structures

    Burnistov, A. S. & Stukachev, A. I., Mar 2022, In: Algebra and Logic. 61, 1, p. 16-29 14 p.

    Research output: Contribution to journal › Article › peer-review

  20. Editorial: Association Between Individuals’ Genomic Ancestry and Variation in Disease Susceptibility

    Das, R., Tatarinova, T. V., Galieva, E. R. & Orlov, Y. L., 2 Feb 2022, In: Frontiers in Genetics. 13, 831320.

    Research output: Contribution to journal › Editorial › peer-review

  21. Brain Principles Programming

    Vityaev, E., Kolonin, A., Kurpatov, A. & Molchanov, A., 2022, In: Doklady Mathematics. 106, p. S101-S112

    Research output: Contribution to journal › Article › peer-review

  22. On Comparative Analysis of Rule-Based Cognitive Architectures

    Kolonin, Y. & Vityaev, E., 2022, Artificial General Intelligence - 14th International Conference, AGI 2021, Proceedings. Goertzel, B., Iklé, M. & Potapov, A. (eds.). 1 ed. Springer Science and Business Media Deutschland GmbH, p. 279-282 4 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13154 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  23. Well-Orders Realized by C.E. Equivalence Relations

    Bazhenov, N. & Zubkov, M., 2022, Revolutions and Revelations in Computability - 18th Conference on Computability in Europe, CiE 2022, Proceedings. Berger, U., Pauly, A., Franklin, J. N. Y. & Manea, F. (eds.). Springer Science and Business Media Deutschland GmbH, p. 13-23 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13359 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  24. 2021

  25. Statistical estimates of multiple transcription factors binding in the model plant genomes based on ChIP-seq data

    Dergilev, A. I., Orlova, N. G., Dobrovolskaya, O. B. & Orlov, Y. L., 21 Dec 2021, In: Journal of integrative bioinformatics. 19, 1, 12 p.

    Research output: Contribution to journal › Article › peer-review

  26. Editorial: Bioinformatics of Genome Regulation, Volume I

    Orlov, Y. L., Tatarinova, T. V., Oparina, N. Y., Galieva, E. R. & Baranova, A. V., 6 Dec 2021, In: Frontiers in Genetics. 12, 803273.

    Research output: Contribution to journal › Editorial › peer-review

  27. Glioblastoma gene network reconstruction and ontology analysis by online bioinformatics tools

    Gubanova, N. V., Orlova, N. G., Dergilev, A. I., Oparina, N. Y. & Orlov, Y. L., 16 Nov 2021, In: Journal of integrative bioinformatics. 18, 4

    Research output: Contribution to journal › Article › peer-review

  28. Bioinformatics applications to reveal molecular mechanisms of gene expression regulation in model organisms

    Orlov, Y. L., Tatarinova, T. V. & Anashkina, A. A., 1 Nov 2021, In: International Journal of Molecular Sciences. 22, 21, 11973.

    Research output: Contribution to journal › Editorial › peer-review

  29. Recent trends in cancer genomics and bioinformatics tools development

    Anashkina, A. A., Leberfarb, E. Y. & Orlov, Y. L., 1 Nov 2021, In: International Journal of Molecular Sciences. 22, 22, 12146.

    Research output: Contribution to journal › Editorial › peer-review

  30. Life: Computational genomics applications in life sciences

    Orlov, Y. L. & Anashkina, A. A., Nov 2021, In: Life. 11, 11, 1211.

    Research output: Contribution to journal › Editorial › peer-review

  31. On Decidable Categoricity for Almost Prime Models of the Signature of Graphs

    Marchuk, M. I., Oct 2021, In: Siberian Advances in Mathematics. 31, 4, p. 283-300 18 p.

    Research output: Contribution to journal › Article › peer-review

  32. Autophagy genes expression profiling in secondary glioblastoma cells transcriptome

    Gubanova, N., Bragin, A., Vasiliev, G., Babenko, V., Ponomarenko, M. & Orlov, Y., Sept 2021, In: Cell death discovery. 7, SUPPL 1, p. 5-5 1 p.

    Research output: Contribution to journal › Meeting Abstract › peer-review

  33. Biodistribution of10 b in glioma orthotopic xenograft mouse model after injection of l-para-boronophenylalanine and sodium borocaptate

    Gubanova, N. V., Tsygankova, A. R., Zavjalov, E. L., Romashchenko, A. V. & Orlov, Y. L., Jul 2021, In: Biomedicines. 9, 7, 722.

    Research output: Contribution to journal › Article › peer-review

  34. Categoricity Spectra of Computable Structures

    Bazhenov, N. A., Jul 2021, In: Journal of Mathematical Sciences (United States). 256, 1, p. 34-50 17 p.

    Research output: Contribution to journal › Article › peer-review

  35. Interval Extensions of Orders and Temporal Approximation Spaces

    Stukachev, A. I., Jul 2021, In: Siberian Mathematical Journal. 62, 4, p. 730-741 12 p.

    Research output: Contribution to journal › Article › peer-review

  36. The Degree of Decidable Categoricity of a Model with Infinite Solutions for Complete Formulas

    Goncharov, S. S. & Marchuk, M. I., Jul 2021, In: Algebra and Logic. 60, 3, p. 200-206 7 p.

    Research output: Contribution to journal › Article › peer-review

  37. Prototypes of the “natural” concepts discovery

    Vityaev, E. & Pak, B., Jun 2021, In: Cognitive Systems Research. 67, p. 1-8 8 p.

    Research output: Contribution to journal › Article › peer-review

  38. Полиморфизм вариантов гена N-ацетилтрансферазы 2 (NAT2) и анализ генной сети

    Tiis, R. P., Osipova, L. P., Galieva, E. R., Lichman, D. V., Voronina, E. N., Melikhova, A. V., Orlov, Y. L. & Filipenko, M. L., May 2021, In: Biomeditsinskaya Khimiya. 67, 3, p. 213-221 9 p., 4.

    Research output: Contribution to journal › Article › peer-review

  39. Реконструкция генной сети болезни Паркинсона для поиска генов-мишеней

    Orlov, Y. L., Galieva, A. G., Orlova, N. G., Ivanova, E. N., Mozyleva, Y. A. & Anashkina, A. A., May 2021, In: Biomeditsinskaya Khimiya. 67, 3, p. 222-230 9 p., 5.

    Research output: Contribution to journal › Article › peer-review

  40. Molecular characteristic of treatment failure clinical isolates of Leishmania major

    Eslami, G., Hatefi, S., Ramezani, V., Tohidfar, M., Churkina, T. V., Orlov, Y. L., Hosseini, S. S., Boozhmehrani, M. J. & Vakili, M., 11 Mar 2021, In: PeerJ. 9, 10969.

    Research output: Contribution to journal › Article › peer-review

  41. Erratum: Correction to: Analyzing a putative enhancer of optic disc morphology (BMC genomic data (2020) 21 Suppl 1 (73))

    Babenko, V. N., Babenko, R. O. & Orlov, Y. N., 4 Feb 2021, In: BMC genomic data. 22, 1, p. 5 1 p.

    Research output: Contribution to journal › Comment/debate › peer-review

  42. The Index Set of the Class of Autostable Ordered Abelian Groups

    Marchuk, M. I., Feb 2021, In: Siberian Advances in Mathematics. 31, 1, p. 40-44 5 p.

    Research output: Contribution to journal › Article › peer-review

  43. In situ dissecting the evolution of gene duplication with different histone modification patterns based on high-throughput data analysis in Arabidopsis thaliana

    Wang, J., Orlov, Y. L., Li, X., Zhou, Y., Liu, Y., Yuan, C. & Chen, M., 5 Jan 2021, In: PeerJ. 9, 19 p., e10426.

    Research output: Contribution to journal › Article › peer-review

  44. On Universal Pairs in the Ershov Hierarchy

    Bazhenov, N. A., Mustafa, M. & Ospichev, S. S., Jan 2021, In: Siberian Mathematical Journal. 62, 1, p. 23-31 9 p.

    Research output: Contribution to journal › Article › peer-review

  45. Approximation spaces of temporal processes and effectiveness of interval semantics

    Stukachev, A., 2021, Distributed Computing and Artificial Intelligence, Special Sessions, 17th International Conference, DCAI 2020. Rodríguez González, S., Prieto, J., González-Briones, A., Gola, A., Katranas, G., Ricca, M., Loukanova, R. & Loukanova, R. (eds.). Springer Nature, p. 53-61 9 p. (Advances in Intelligent Systems and Computing; vol. 1242 AISC).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  46. Computable metrics above the standard real metric

    Kornev, R., 2021, In: Siberian Electronic Mathematical Reports. 18, 1, p. 377-392 16 p., 29.

    Research output: Contribution to journal › Article › peer-review

  47. Degrees of bi-embeddable categoricity

    Bazhenov, N., Fokina, E., Rossegger, D. & San Mauro, L., 2021, In: Computability. 10, 1, p. 1-16 16 p.

    Research output: Contribution to journal › Article › peer-review

  48. Representation of “Natural” Concepts and Classes by a Hypernet Lattice of (Probabilistic) Formal Concepts

    Vityaev, E., 2021, Advances in Cognitive Research, Artificial Intelligence and Neuroinformatics - Proceedings of the 9th International Conference on Cognitive Sciences, Intercognsci-2020. Velichkovsky, B. M., Balaban, P. M. & Ushakov, V. L. (eds.). Springer Science and Business Media Deutschland GmbH, p. 671-676 6 p. (Advances in Intelligent Systems and Computing; vol. 1358 AIST).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Research › peer-review

  49. 2020

  50. Bioinformatics of genome regulation and structure - 2020 papers collection

    Orlov, Y. L., Dobrovolskaya, O. B., Chen, M. & Hofestaedt, R., Dec 2020, In: Journal of integrative bioinformatics. 17, 4, 3 p., 20200038.

    Research output: Contribution to journal › Editorial › peer-review

  51. Learning families of algebraic structures from informant

    Bazhenov, N., Fokina, E. & San Mauro, L., Dec 2020, In: Information and Computation. 275, 17 p., 104590.

    Research output: Contribution to journal › Article › peer-review

  52. On the complexity of the lattices of subvarieties and congruences

    Kravchenko, A. V., Nurakunov, A. M. & Schwidefsky, M. V., Dec 2020, In: International Journal of Algebra and Computation. 30, 8, p. 1609-1624 16 p.

    Research output: Contribution to journal › Article › peer-review

  53. The rs78378222 prevalence and the copy loss of the protective allele A in the tumor tissue of diffuse large B-cell lymphoma

    Voropaeva, E. N., Orlov, Y. L., Pospelova, T. I., Gurageva, A. A., Voevoda, M. I., Maksimov, V. N., Seregina, O. B. & Churkina, M. I., 12 Nov 2020, In: PeerJ. 8, 14 p., e10335.

    Research output: Contribution to journal › Article › peer-review

  54. Classifying equivalence relations in the Ershov hierarchy

    Bazhenov, N., Mustafa, M., San Mauro, L., Sorbi, A. & Yamaleev, M., 1 Nov 2020, In: Archive for Mathematical Logic. 59, 7-8, p. 835-864 30 p.

    Research output: Contribution to journal › Article › peer-review

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