201 - 250 out of 250Page size: 50
  1. 2018

  2. Human Genetic Predisposition to Diseases Caused by Viruses from Flaviviridae Family

    Yudin, N. S., Barkhash, A. V., Maksimov, V. N., Ignatieva, E. V. & Romaschenko, A. G., 27 Apr 2018, In: Molekuliarnaia biologiia. 52, 2, p. 190-209 20 p.

    Research output: Contribution to journal › Review article › peer-review

  3. Haplotype analysis of APOE intragenic SNPs

    Babenko, V. N., Afonnikov, D. A., Ignatieva, E. V., Klimov, A. V., Gusev, F. E. & Rogaev, E. I., 19 Apr 2018, In: BMC Neuroscience. 19, Suppl 1, p. 16 12 p., 16.

    Research output: Contribution to journal › Article › peer-review

  4. Novel functional variants at the GWAS-implicated loci might confer risk to major depressive disorder, bipolar affective disorder and schizophrenia

    Bryzgalov, L. O., Korbolina, E. E., Brusentsov, I. I., Leberfarb, E. Y., Bondar, N. P. & Merkulova, T. I., 19 Apr 2018, In: BMC Neuroscience. 19, Suppl 1, p. 22 16 p., 22.

    Research output: Contribution to journal › Article › peer-review

  5. Molecular Adaptations to Social Defeat Stress and Induced Depression in Mice

    Bondar, N., Bryzgalov, L., Ershov, N., Gusev, F., Reshetnikov, V., Avgustinovich, D., Tenditnik, M., Rogaev, E. & Merkulova, T., 1 Apr 2018, In: Molecular Neurobiology. 55, 4, p. 3394-3407 14 p.

    Research output: Contribution to journal › Article › peer-review

  6. Polytene chromosomes – A portrait of functional organization of drosophila genome

    Zykova, T. Y., Levitsky, V. G., Belyaeva, E. S. & Zhimulev, I. F., Apr 2018, In: Current Genomics. 19, 3, p. 179-191 13 p.

    Research output: Contribution to journal › Review article › peer-review

  7. Pluripotency gene network dynamics: System views from parametric analysis

    Akberdin, I. R., Omelyanchuk, N. A., Fadeev, S. I., Leskova, N. E., Oschepkova, E. A., Kazantsev, F. V., Matushkin, Y. G., Afonnikov, D. A. & Kolchanov, N. A., 29 Mar 2018, In: PLoS ONE. 13, 3, p. e0194464 24 p., 0194464.

    Research output: Contribution to journal › Article › peer-review

  8. Correction: Methane utilization in Methylomicrobium alcaliphilum 20ZR: A systems approach (Scientific Reports (2017) DOI: 10.1038/s41598-018-20574-z): a systems approach (vol 8, 2017)

    Akberdin, I. R., Thompson, M., Hamilton, R., Desai, N., Alexander, D., Henard, C. A., Guarnieri, M. T. & Kalyuzhnaya, M. G., 14 Mar 2018, In: Scientific Reports. 8, 1, p. 4753 1 p., 4753.

    Research output: Contribution to journal › Comment/debate › peer-review

  9. Human Genetic Predisposition to Diseases Caused by Viruses from Flaviviridae Family

    Yudin, N. S., Barkhash, A. V., Maksimov, V. N., Ignatieva, E. V. & Romaschenko, A. G., 1 Mar 2018, In: Molecular Biology. 52, 2, p. 165-181 17 p.

    Research output: Contribution to journal › Review article › peer-review

  10. Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Chadaeva, I. V., Ponomarenko, P. M., Rasskazov, D. A., Sharypova, E. B., Kashina, E. V., Zhechev, D. A., Drachkova, I. A., Arkova, O. V., Savinkova, L. K., Ponomarenko, M. P., Kolchanov, N. A., Osadchuk, L. V. & Osadchuk, A. V., 9 Feb 2018, In: BMC Genomics. 19, Suppl 3, p. 0 23 p., 0.

    Research output: Contribution to journal › Article › peer-review

  11. Consequences of early life stress on genomic landscape of H3K4me3 in prefrontal cortex of adult mice

    Ershov, N. I., Bondar, N. P., Lepeshko, A. A., Reshetnikov, V. V., Ryabushkina, J. A. & Merkulova, T. I., 9 Feb 2018, In: BMC Genomics. 19, Suppl 3, p. 93 11 p., 93.

    Research output: Contribution to journal › Article › peer-review

  12. Methane utilization in Methylomicrobium alcaliphilum 20ZR: A systems approach

    Akberdin, I. R., Thompson, M., Hamilton, R., Desai, N., Alexander, D., Henard, C. A., Guarnieri, M. T. & Kalyuzhnaya, M. G., 6 Feb 2018, In: Scientific Reports. 8, 1, p. 2512 13 p., 2512.

    Research output: Contribution to journal › Article › peer-review

  13. Argo_CUDA: Exhaustive GPU based approach for motif discovery in large DNA datasets

    Vishnevsky, O. V., Bocharnikov, A. V. & Kolchanov, N. A., 1 Feb 2018, In: Journal of Bioinformatics and Computational Biology. 16, 1, 23 p., 1740012.

    Research output: Contribution to journal › Article › peer-review

  14. MAMMOTh: A new database for curated mathematical models of biomolecular systems

    Kazantsev, F., Akberdin, I., Lashin, S., Ree, N., Timonov, V., Ratushny, A., Khlebodarova, T. & Likhoshvai, V., 1 Feb 2018, In: Journal of Bioinformatics and Computational Biology. 16, 1, 16 p., 1740010.

    Research output: Contribution to journal › Article › peer-review

  15. Diversity of cis-regulatory elements associated with auxin response in Arabidopsis thaliana

    Cherenkov, P., Novikova, D., Omelyanchuk, N., Levitsky, V., Grosse, I., Weijers, D. & Mironova, V., 4 Jan 2018, In: Journal of Experimental Botany. 69, 2, p. 329-339 11 p.

    Research output: Contribution to journal › Article › peer-review

  16. High temperature and pressure influence the interdomain orientation of Nip7 proteins from P. abyssi and P. furiosus: MD simulations

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 2 Jan 2018, In: Journal of Biomolecular Structure and Dynamics. 36, 1, p. 68-82 15 p.

    Research output: Contribution to journal › Article › peer-review

  17. An experimental study of the effect of rare polymorphisms of human HBB, HBD and F9 promoter TATA boxes on the kinetics of interaction with the TATA-binding protein

    Sharypova, E. B., Drachkova, I. A., Kashina, E. V., Rasskazov, D. A., Ponomarenko, M. P., Ponomarenko, M. P., Kolchanov, N. A. & Savinkova, L. K., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 145-152 8 p.

    Research output: Contribution to journal › Article › peer-review

  18. An integrated information system on bioresource collections of the FASO of Russia

    Lashin, S. A., Afonnikov, D. A., Genaev, M. A., Kazantsev, F. V., Komyshev, E. G., Oschepkova, E. A., Petrov, A. V., Rasskazov, D. A., Smirnova, A. A. & Kolchanov, N. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 3, p. 386-393 8 p.

    Research output: Contribution to journal › Article › peer-review

  19. Informational resources on potato germplasm collections

    Afonnikov, D. A., Totsky, I. V. & Stasevski, Z., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 115-121 7 p.

    Research output: Contribution to journal › Review article › peer-review

  20. Information system on microbial collections as a part of bioresource collections portal for Russia’s FASO organizations: A working protocol

    Kazantsev, F. V., Smirnova, A. A., Rozanov, A. S., Uvarova, Y. E., Afonnikov, D. A., Peltek, S. E. & Lashin, S. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 2, p. 279-284 6 p.

    Research output: Contribution to journal › Article › peer-review

  21. Leaf hairiness in potato Solanum tuberosum: Morphology, function and methods of analysis

    Doroshkov, A. V. & Afonnikov, D. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 46-53 8 p.

    Research output: Contribution to journal › Review article › peer-review

  22. Prioritization of genes associated with the pathogenesis of leukosis in cattle

    Yudin, N. S., Podkolodnyy, N. L., Agarkova, T. A. & Ignatieva, E. V., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 8, p. 1063-1069 7 p.

    Research output: Contribution to journal › Article › peer-review

  23. SpikeDroidDB: An information system for annotation of morphometric characteristics of wheat spike

    Genaev, M. A., Komyshev, E. G., Hao, F., Koval, V. S., Goncharov, N. P. & Afonnikov, D. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 132-140 9 p.

    Research output: Contribution to journal › Article › peer-review

  24. The bristle pattern development in Drosophila melanogaster: The prepattern and achaete-scute genes

    Furman, D. P. & Bukharina, T. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 8, p. 1046-1054 9 p.

    Research output: Contribution to journal › Article › peer-review

  25. The impact of early-life stress on the expression of HPA-associated genes in the adult murine brain

    Reshetnikov, V. V., Studenikina, A. A., Ryabushkina, J. A., Merkulova, T. I. & Bondar, N. P., 1 Jan 2018, In: Behaviour. 155, 2-3, p. 181-203 23 p.

    Research output: Contribution to journal › Article › peer-review

  26. Using the methods of systems biology for predicting perspective target genes to select C3 and C4 cereals for oxidative stress resistance

    Doroshkov, A. V. & Bobrovskikh, A. V., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 122-131 10 p.

    Research output: Contribution to journal › Article › peer-review

  27. Wheat leaf epidermal pattern as a model for studying the influence of stress conditions on morphogenesis

    Zubairova, U. S. & Doroshkov, A. V., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 7, p. 837-844 8 p.

    Research output: Contribution to journal › Article › peer-review

  28. 2017

  29. A compendium and functional characterization of mammalian genes involved in adaptation to Arctic or Antarctic environments

    Yudin, N. S., Larkin, D. M. & Ignatieva, E. V., 28 Dec 2017, In: BMC Genetics. 18, Suppl 1, p. 111 11 p., 111.

    Research output: Contribution to journal › Article › peer-review

  30. A database of human genes and a gene network involved in response to tick-borne encephalitis virus infection

    Ignatieva, E. V., Igoshin, A. V. & Yudin, N. S., 28 Dec 2017, In: BMC Evolutionary Biology. 17, Suppl 2, p. 259 14 p., 259.

    Research output: Contribution to journal › Article › peer-review

  31. Metabolic pathways and genes identified by RNA-seq analysis of barley near-isogenic lines differing by allelic state of the Black lemma and pericarp (Blp) gene

    Glagoleva, A. Y., Shmakov, N. A., Shoeva, O. Y., Vasiliev, G. V., Shatskaya, N. V., Börner, A., Afonnikov, D. A. & Khlestkina, E. K., 14 Nov 2017, In: BMC Plant Biology. 17, Suppl 1, p. 182 9 p., 182.

    Research output: Contribution to journal › Article › peer-review

  32. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Nov 2017, In: Russian Journal of Genetics: Applied Research. 7, 7, p. 736-743 8 p.

    Research output: Contribution to journal › Article › peer-review

  33. Diversity of leaf pubescence in bread wheat and relative species

    Pshenichnikova, T. A., Doroshkov, A. V., Simonov, A. V., Afonnikov, D. A. & Börner, A., 1 Oct 2017, In: Genetic Resources and Crop Evolution. 64, 7, p. 1761-1773 13 p.

    Research output: Contribution to journal › Article › peer-review

  34. Candidate SNP markers of familial and sporadic Alzheimer's diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Ponomarenko, P., Chadaeva, I., Rasskazov, D. A., Sharypova, E., Kashina, E. V., Drachkova, I., Zhechev, D., Ponomarenko, M. P., Savinkova, L. K. & Kolchanov, N., 20 Jul 2017, In: Frontiers in Aging Neuroscience. 9, JUL, p. 231 24 p., 231.

    Research output: Contribution to journal › Article › peer-review

  35. Analysis of the neurogenesis: Prepattern gene network controlling first stage of bristle pattern development in Drosophila melanogaster

    Furman, D. P. & Bukharina, T. A., 1 Jul 2017, In: Russian Journal of Genetics: Applied Research. 7, 5, p. 550-557 8 p.

    Research output: Contribution to journal › Article › peer-review

  36. Expression dynamics of the REL, RELA, and IRF1 transcription factors in U937 macrophages after dioxin exposure

    Kashina, E. V., Oshchepkov, D. Y., Antontseva, E. V., Shamanina, M. Y., Furman, D. P. & Mordvinov, V. A., 1 Jul 2017, In: Russian Journal of Genetics: Applied Research. 7, 5, p. 580-584 5 p.

    Research output: Contribution to journal › Article › peer-review

  37. SNP_TATA_Comparator: genomewide landmarks for preventive personalized medicine

    Ponomarenko, M., Rasskazov, D., Chadaeva, I., Sharypova, E., Ponomarenko, P., Arkova, O., Kashina, E., Ivanisenko, N., Zhechev, D., Savinkova, L. & Kolchanov, N., 1 Jun 2017, In: Frontiers in bioscience (Scholar edition). 9, p. 276-306 31 p.

    Research output: Contribution to journal › Review article › peer-review

  38. Systems biology analysis of the WOX5 gene and its functions in the root stem cell niche

    Oshchepkova, E. A., Omelyanchuk, N. A., Savina, M. S., Pasternak, T., Kolchanov, N. A. & Zemlyanskaya, E. V., 1 Jun 2017, In: Russian Journal of Genetics: Applied Research. 7, 4, p. 404-420 17 p.

    Research output: Contribution to journal › Article › peer-review

  39. Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots

    Omelyanchuk, N. A., Wiebe, D. S., Novikova, D. D., Levitsky, V. G., Klimova, N., Gorelova, V., Weinholdt, C., Vasiliev, G. V., Zemlyanskaya, E. V., Kolchanov, N. A., Kochetov, A. V., Grosse, I. & Mironova, V. V., 30 May 2017, In: Scientific Reports. 7, 1, p. 2489 11 p., 2489.

    Research output: Contribution to journal › Article › peer-review

  40. Identification of residues of the archaeal RNA-binding Nip7 proteins specific to environmental conditions

    Medvedev, K. E., Kolchanov, N. A. & Afonnikov, D. A., 1 Apr 2017, In: Journal of Bioinformatics and Computational Biology. 15, 2, p. 1650036 18 p., 1650036.

    Research output: Contribution to journal › Article › peer-review

  41. Protein and genetic composition of four chromatin types in Drosophila melanogaster cell lines

    Boldyreva, L. V., Goncharov, F. P., Demakova, O. V., Zykova, T. Y., Levitsky, V. G., Kolesnikov, N. N., Pindyurin, A. V., Semeshin, V. F. & Zhimulev, I. F., 1 Apr 2017, In: Current Genomics. 18, 2, p. 214-226 13 p.

    Research output: Contribution to journal › Article › peer-review

  42. AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs

    Kochetov, A. V., Allmer, J., Klimenko, A. I., Zuraev, B. S., Matushkin, Y. G., Lashin, S. A. & Hancock, J., 15 Mar 2017, In: Bioinformatics. 33, 6, p. 923-925 3 p.

    Research output: Contribution to journal › Article › peer-review

  43. Status and prospects of marker-assisted and genomic plant breeding

    Kolchanov, N. A., Kochetov, A. V., Salina, E. A., Pershina, L. A., Khlestkina, E. K. & Shumny, V. K., 1 Mar 2017, In: Herald of the Russian Academy of Sciences. 87, 2, p. 125-131 7 p.

    Research output: Contribution to journal › Article › peer-review

  44. Orthoscape: A cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles

    Mustafin, Z. S., Lashin, S. A., Matushkin, Y. G., Gunbin, K. V. & Afonnikov, D. A., 27 Jan 2017, In: Bioinformatics. 18, Suppl 1, p. 1-9 9 p., 28.

    Research output: Contribution to journal › Article › peer-review

  45. The interplay of chromatin landscape and DNA-binding context suggests distinct modes of EIN3 regulation in Arabidopsis thaliana

    Zemlyanskaya, E. V., Levitsky, V. G., Oshchepkov, D. Y., Grosse, I. & Mironova, V. V., 9 Jan 2017, In: Frontiers in Plant Science. 7, 9 p., 2044.

    Research output: Contribution to journal › Article › peer-review

  46. Evaluation of the SeedCounter, a mobile application for grain phenotyping

    Komyshev, E., Genaev, M. & Afonnikov, D., 4 Jan 2017, In: Frontiers in Plant Science. 7, p. 1990 9 p., 1990.

    Research output: Contribution to journal › Article › peer-review

  47. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 1, p. 96-103 8 p.

    Research output: Contribution to journal › Article › peer-review

  48. Dihydroartemisinin counteracts fibrotic portal hypertension via farnesoid X receptor-dependent inhibition of hepatic stellate cell contraction

    Endutkin, A., Popov, A., Yudkina, A., Makasheva, K., Afonnikov, D., Simmerling, C. & Zharkov, D., 1 Jan 2017, In: FEBS Journal. 284, 1, p. 114-133 20 p.

    Research output: Contribution to journal › Article › peer-review

  49. Modern opportunities for improving quality of bakery products via realizing the bread wheat genetic potential-by-environment interactions (review)

    Khlestkina, E. K., Zhuravleva, E. V., Pshenichnikova, T. A., Usenko, N. I., Morozova, E. V., Osipova, S. V., Permyakova, M. D., Afonnikov, D. A. & Otmakhova, Y. S., 1 Jan 2017, In: Sel'skokhozyaistvennaya Biologiya. 52, 3, p. 501-514 14 p.

    Research output: Contribution to journal › Article › peer-review

  50. Online resources on gene networks containing human and animal data

    Ignatieva, E. V., Afonnikov, D. A. & Kolchanov, N. A., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 8, p. 895-902 8 p.

    Research output: Contribution to journal › Article › peer-review

  51. 2016

  52. Mechanical behavior of cells within a cell-based model of wheat leaf growth

    Zubairova, U., Nikolaev, S., Penenko, A., Podkolodnyy, N., Golushko, S., Afonnikov, D. & Kolchanov, N., 15 Dec 2016, In: Frontiers in Plant Science. 7, DECEMBER2016, 15 p., 1878.

    Research output: Contribution to journal › Article › peer-review

  53. 2015

  54. Development of artificial cognitive systems based on models of the brain of living organisms

    Putintsev, N. I., Vishnevsky, O. V. & Vityaev, E. E., 1 Nov 2015, In: Russian Journal of Genetics: Applied Research. 5, 6, p. 589-600 12 p.

    Research output: Contribution to journal › Article › peer-review

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