1. Article › Research › Peer-reviewed
  2. 3D analysis of mitosis distribution highlights the longitudinal zonation and diarch symmetry in proliferation activity of the Arabidopsis thaliana root meristem

    Lavrekha, V. V., Pasternak, T., Ivanov, V. B., Palme, K. & Mironova, V. V., 1 Dec 2017, In: Plant Journal. 92, 5, p. 834-845 12 p.

    Research output: Contribution to journalArticlepeer-review

  3. 3D Analysis of Mitosis Distribution Pattern in the Plant Root Tip with iRoCS Toolbox

    Lavrekha, V. V., Pasternak, T., Palme, K. & Mironova, V. V., 1 Jan 2020, In: Methods in molecular biology (Clifton, N.J.). 2094, p. 119-125 7 p.

    Research output: Contribution to journalArticlepeer-review

  4. 3DGenBench: a web-server to benchmark computational models for 3D Genomics

    Belokopytova, P., Viesná, E., Chiliński, M., Qi, Y., Salari, H., Di Stefano, M., Esposito, A., Conte, M., Chiariello, A. M., Teif, V. B., Plewczynski, D., Zhang, B., Jost, D. & Fishman, V., 5 Jul 2022, In: Nucleic Acids Research. 50, W1, p. W4-W12

    Research output: Contribution to journalArticlepeer-review

  5. 3D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin

    Fishman, V., Battulin, N., Nuriddinov, M., Maslova, A., Zlotina, A., Strunov, A., Chervyakova, D., Korablev, A., Serov, O. & Krasikova, A., 25 Jan 2019, In: Nucleic Acids Research. 47, 2, p. 648-665 18 p.

    Research output: Contribution to journalArticlepeer-review

  6. ABC transporters in the liver fluke Opisthorchis felineus

    Mordvinov, V. A., Ershov, N. I., Pirozhkova, D. S., Pakharukov, Y. V. & Pakharukova, M. Y., 1 Sept 2017, In: Molecular and Biochemical Parasitology. 216, p. 60-68 9 p.

    Research output: Contribution to journalArticlepeer-review

  7. Abnormal mTOR Signaling Pathway Activity in Autism Spectrum Disorders: Prospects of Mechanism-Based Therapy

    Trifonova, E. A., Kotliarova, A. A. & Kochetov, A. V., Apr 2023, In: Molecular Biology. 57, 2, p. 235-244 10 p.

    Research output: Contribution to journalArticlepeer-review

  8. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Nov 2017, In: Russian Journal of Genetics: Applied Research. 7, 7, p. 736-743 8 p.

    Research output: Contribution to journalArticlepeer-review

  9. Achievements and prospects of applying high-throughput sequencing techniques to potato genetics and breeding

    Bykova, I. V., Shmakov, N. A., Afonnikov, D. A., Kochetov, A. V. & Khlestkina, E. K., 1 Jan 2017, In: Вавиловский журнал генетики и селекции. 21, 1, p. 96-103 8 p.

    Research output: Contribution to journalArticlepeer-review

  10. A common founder effect of the splice site variant c.-23 + 1G > A in GJB2 gene causing autosomal recessive deafness 1A (DFNB1A) in Eurasia

    Solovyev, A. V., Kushniarevich, A., Bliznetz, E., Bady-Khoo, M., Lalayants, M. R., Markova, T. G., Minárik, G., Kádasi, L., Metspalu, E., Pshennikova, V. G., Teryutin, F. M., Khusnutdinova, E. K., Poliakov, A., Metspalu, M., Posukh, O. L., Barashkov, N. A. & Fedorova, S. A., Apr 2022, In: Human Genetics. 141, 3-4, p. 697-707 11 p.

    Research output: Contribution to journalArticlepeer-review

  11. A comparative study of Helicobacter pylori infection in hamsters experimentally infected with liver flukes Opisthorchis felineus, Opisthorchis viverrini, or Clonorchis sinensis

    Pakharukova, M. Y., Zaparina, O., Hong, S. J., Sripa, B. & Mordvinov, V. A., 8 Apr 2021, In: Scientific Reports. 11, 1, 7789.

    Research output: Contribution to journalArticlepeer-review

  12. A comparison of stress reactivity between BTBR and C57BL/6J mice: an impact of early-life stress

    Ayriyants, K. A., Ryabushkina, Y. A., Sapronova, A. A., Ivanchikhina, A. V., Kolesnikova, M. M., Bondar, N. P. & Reshetnikov, V. V., Mar 2023, In: Experimental brain research. 241, 3, p. 687-698 12 p.

    Research output: Contribution to journalArticlepeer-review

  13. A cookbook for DNase Hi-C

    Gridina, M., Mozheiko, E., Valeev, E., Nazarenko, L. P., Lopatkina, M. E., Markova, Z. G., Yablonskaya, M. I., Voinova, V. Y., Shilova, N. V., Lebedev, I. N. & Fishman, V., 20 Mar 2021, In: Epigenetics and Chromatin. 14, 1, 15.

    Research output: Contribution to journalArticlepeer-review

  14. A Cre-LoxP-based approach for combinatorial chromosome rearrangements in human HAP1 cells

    Khabarova, A., Koksharova, G., Salnikov, P., Belokopytova, P., Mungalov, R., Pristyazhnuk, I., Nurislamov, A., Gridina, M. & Fishman, V., 26 Feb 2023, In: Chromosome Research. 31, 1, 15 p., 11.

    Research output: Contribution to journalArticlepeer-review

  15. A database on genes increasing the resistance of wheat and its related species against pathogenic fungi

    Smirnova, O. G. & Kochetov, A. V., 1 Dec 2017, In: Russian Journal of Genetics: Applied Research. 7, 8, p. 816-821 6 p.

    Research output: Contribution to journalArticlepeer-review

  16. A Drosophila melanogaster mitotype may have an adaptive meaning

    Petrovskii, D. V. & Zakharenko, L. P., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 370-374 5 p.

    Research output: Contribution to journalArticlepeer-review

  17. Age and gender differences in personality traits from early childhood through adolescence

    Slobodskaya, H. R. & Kornienko, O. S., Oct 2021, In: Journal of Personality. 89, 5, p. 933-950 18 p.

    Research output: Contribution to journalArticlepeer-review

  18. Agent-Based Modeling of Autosomal Recessive Deafness 1A (DFNB1A) Prevalence with Regard to Intensity of Selection Pressure in Isolated Human Population

    Romanov, G. P., Smirnova, A. A., Zamyatin, V. I., Mukhin, A. M., Kazantsev, F. V., Pshennikova, V. G., Teryutin, F. M., Solovyev, A. V., Fedorova, S. A., Posukh, O. L., Lashin, S. A. & Barashkov, N. A., Feb 2022, In: Biology. 11, 2, 257.

    Research output: Contribution to journalArticlepeer-review

  19. A hypomorphic mutation in the mouse Csn1s1 gene generated by CRISPR/Cas9 pronuclear microinjection

    Smirnov, A. V., Shnaider, T., Korablev, A. N., Yunusova, A. M., Serova, I. A. & Battulin, N. R., Mar 2021, In: Vavilovskii Zhurnal Genetiki i Selektsii. 25, 3, p. 331-336 6 p., 10.

    Research output: Contribution to journalArticlepeer-review

  20. Allele-Specific Biased Expression of the CNTN6 Gene in iPS Cell-Derived Neurons from a Patient with Intellectual Disability and 3p26.3 Microduplication Involving the CNTN6 Gene

    Gridina, M. M., Matveeva, N. M., Fishman, V. S., Menzorov, A. G., Kizilova, H. A., Beregovoy, N. A., Kovrigin, I. I., Pristyazhnyuk, I. E., Oscorbin, I. P., Filipenko, M. L., Kashevarova, A. A., Skryabin, N. A., Nikitina, T. V., Sazhenova, E. A., Nazarenko, L. P., Lebedev, I. N. & Serov, O. L., 1 Aug 2018, In: Molecular Neurobiology. 55, 8, p. 6533-6546 14 p.

    Research output: Contribution to journalArticlepeer-review

  21. Alternative dominance of the parental genomes in hybrid cells generated through the fusion of mouse embryonic stem cells with fibroblasts

    Matveeva, N. M., Fishman, V. S., Zakharova, I. S., Shevchenko, A. I., Pristyazhnyuk, I. E., Menzorov, A. G. & Serov, O. L., 22 Dec 2017, In: Scientific Reports. 7, 1, p. 18094 14 p., 18094.

    Research output: Contribution to journalArticlepeer-review

  22. AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs

    Kochetov, A. V., Allmer, J., Klimenko, A. I., Zuraev, B. S., Matushkin, Y. G., Lashin, S. A. & Hancock, J., 15 Mar 2017, In: Bioinformatics. 33, 6, p. 923-925 3 p.

    Research output: Contribution to journalArticlepeer-review

  23. A misleading representation of the asian distributioof a most intriguing dragonfly, somatochlora sahlbergi trybom, 1889: a critique of KOHLI et al. (2018)

    Kosterin, O. E., Jun 2020, In: Odonatologica. 49, 1-2, p. 51-56 6 p.

    Research output: Contribution to journalArticlepeer-review

  24. A mosaic intragenic microduplication of LAMA1 and a constitutional 18p11.32 microduplication in a patient with keratosis pilaris and intellectual disability

    Kashevarova, A. A., Nazarenko, L. P., Skryabin, N. A., Nikitina, T. V., Vasilyev, S. A., Tolmacheva, E. N., Lopatkina, M. E., Salyukova, O. A., Chechetkina, N. N., Vorotelyak, E. A., Kalabusheva, E. P., Fishman, V. S., Kzhyshkowska, J., Graziano, C., Magini, P., Romeo, G. & Lebedev, I. N., 1 Nov 2018, In: American Journal of Medical Genetics, Part A. 176, 11, p. 2395-2403 9 p.

    Research output: Contribution to journalArticlepeer-review

  25. Amphicnemis valentini sp. nov. from the cardamom ecoregion in Cambodia and Vietnam (Odonata: Coenagrionidae)

    Kosterin, O. E. & Kompier, T., 6 Jun 2018, In: Zootaxa. 4429, 2, p. 281-294 14 p.

    Research output: Contribution to journalArticlepeer-review

  26. Amplified fragments of an autosome-borne gene constitute a significant component of the w sex chromosome of eremias velox (Reptilia, lacertidae)

    Lisachov, A., Andreyushkova, D., Davletshina, G., Prokopov, D., Romanenko, S., Galkina, S., Saifitdinova, A., Simonov, E., Borodin, P. & Trifonov, V., 20 May 2021, In: Genes. 12, 5, p. NA 779.

    Research output: Contribution to journalArticlepeer-review

  27. Analysis of differential expression of matrix metalloproteases in stable and unstable atherosclerotic lesions by a method of full genome sequencing of RNA: Pilot study

    Ivanoschuk, D. E., Ragino, Y. I., Shakhtshneider, E. V., Mikhailova, S. V., Fishman, V. S., Polonskaya, Y. V., Kashtanova, E. V., Chernyavsky, A. M., Murashov, I. S. & Voevoda, M. I., 1 Jan 2018, In: Russian Journal of Cardiology. 23, 8, p. 52-58 7 p.

    Research output: Contribution to journalArticlepeer-review

  28. Analysis of genetically independent phenotypes identifies shared genetic factors associated with chronic musculoskeletal pain conditions

    Tsepilov, Y. A., Freidin, M. B., Shadrina, A. S., Sharapov, S. Z., Elgaeva, E. E., Zundert, J. V., Karssen, L., Suri, P., Williams, F. M. K. & Aulchenko, Y. S., 25 Jun 2020, In: Communications Biology. 3, 1, 13 p., 329.

    Research output: Contribution to journalArticlepeer-review

  29. Analysis of Genome Structure and Its Variations in Potato Cultivars Grown in Russia

    Karetnikov, D. I., Vasiliev, G. V., Toshchakov, S. V., Shmakov, N. A., Genaev, M. A., Nesterov, M. A., Ibragimova, S. M., Rybakov, D. A., Gavrilenko, T. A., Salina, E. A., Patrushev, M. V., Kochetov, A. V. & Afonnikov, D. A., 16 Mar 2023, In: International Journal of Molecular Sciences. 24, 6, 5713.

    Research output: Contribution to journalArticlepeer-review

  30. Analysis of GJB6 (Сx30) and GJB3 (Сx31) genes in deaf patients with monoallelic mutations in GJB2 (Сx26) gene in the Sakha Republic (Yakutia)

    Pshennikova, V. G., Barashkov, N. A., Solovyev, A. V., Romanov, G. P., Diakonov, E. E., Sazonov, N. N., Morozov, I. V., Bondar, A. A., Posukh, O. L., Dzhemileva, L. U., Khusnutdinova, E. K., Tomsky, M. I. & Fedorova, S. A., 1 Jun 2017, In: Russian Journal of Genetics. 53, 6, p. 688-697 10 p.

    Research output: Contribution to journalArticlepeer-review

  31. A network-based conditional genetic association analysis of the human metabolome

    Tsepilov, Y. A., Sharapov, S. Z., Zaytseva, O. O., Krumsek, J., Prehn, C., Adamski, J., Kastenmüller, G., Wang-Sattler, R., Strauch, K., Gieger, C. & Aulchenko, Y. S., 29 Nov 2018, In: GigaScience. 7, 12, 11 p., 137.

    Research output: Contribution to journalArticlepeer-review

  32. A new approach to estimating the prevalence of hereditary hearing loss: An analysis of the distribution of sign language users based on census data in Russia

    Romanov, G. P., Pshennikova, V. G., Lashin, S. A., Solovyev, A. V., Teryutin, F. M., Cherdonova, A. M., Borisova, T. V., Sazonov, N. N., Khusnutdinova, E. K., Posukh, O. L., Fedorova, S. A. & Barashkov, N. A., Nov 2020, In: PLoS ONE. 15, 11 November, p. e0242219 e0242219.

    Research output: Contribution to journalArticlepeer-review

  33. An experimental study of the effect of rare polymorphisms of human HBB, HBD and F9 promoter TATA boxes on the kinetics of interaction with the TATA-binding protein

    Sharypova, E. B., Drachkova, I. A., Kashina, E. V., Rasskazov, D. A., Ponomarenko, M. P., Ponomarenko, M. P., Kolchanov, N. A. & Savinkova, L. K., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 1, p. 145-152 8 p.

    Research output: Contribution to journalArticlepeer-review

  34. An integrated information system on bioresource collections of the FASO of Russia

    Lashin, S. A., Afonnikov, D. A., Genaev, M. A., Kazantsev, F. V., Komyshev, E. G., Oschepkova, E. A., Petrov, A. V., Rasskazov, D. A., Smirnova, A. A. & Kolchanov, N. A., 1 Jan 2018, In: Вавиловский журнал генетики и селекции. 22, 3, p. 386-393 8 p.

    Research output: Contribution to journalArticlepeer-review

  35. Anopheles mosquitoes reveal new principles of 3D genome organization in insects

    Lukyanchikova, V., Nuriddinov, M., Belokopytova, P., Taskina, A., Liang, J., Reijnders, M. J. M. F., Ruzzante, L., Feron, R., Waterhouse, R. M., Wu, Y., Mao, C., Tu, Z., Sharakhov, I. V. & Fishman, V., Dec 2022, In: Nature Communications. 13, 1, 1960.

    Research output: Contribution to journalArticlepeer-review

  36. Anormogomphus kiritshenkoi Bartenev, 1913 (Odonata: Gomphidae): a literature review of the variable spelling of the species epithet, choice of the correct spelling and notes on the type locality of the species

    Schorr, M., Kosterin, O. E., Borisov, S. N. & Marinov, M., 12 Jan 2018, In: Zootaxa. 4370, 4, p. 439-445 7 p.

    Research output: Contribution to journalArticlepeer-review

  37. A Novel Framework for Analysis of the Shared Genetic Background of Correlated Traits

    Svishcheva, G. R., Tiys, E. S., Elgaeva, E. E., Feoktistova, S. G., Timmers, P. R. H. J., Sharapov, S. Z., Axenovich, T. I. & Tsepilov, Y. A., Oct 2022, In: Genes. 13, 10, 1694.

    Research output: Contribution to journalArticlepeer-review

  38. A novel pathogenic variant c.975G > A (p.Trp325*) in the POU3F4 gene in Yakut family (Eastern Siberia, Russia) with the X-linked deafness-2 (DFNX2)

    Barashkov, N. A., Klarov, L. A., Teryutin, F. M., Solovyev, A. V., Pshennikova, V. G., Konnikova, E. E., Romanov, G. P., Tobokhov, A. V., Morozov, I. V., Bondar, A. A., Posukh, O. L., Dzhemileva, L. U., Tomsky, M. I., Khusnutdinova, E. K. & Fedorova, S. A., Jan 2018, In: International Journal of Pediatric Otorhinolaryngology. 104, p. 94-97 4 p.

    Research output: Contribution to journalArticlepeer-review

  39. A novel pathogenic variant c.975G>A (p.Trp325*) in the POU3F4 gene in Yakut family (Eastern Siberia, Russia) with the X-linked deafness-2 (DFNX2)

    Barashkov, N. A., Klarov, L. A., Teryutin, F. M., Solovyev, A. V., Pshennikova, V. G., Konnikova, E. E., Romanov, G. P., Tobokhov, A. V., Morozov, I. V., Bondar, A. A., Posukh, O. L., Dzhemileva, L. U., Tomsky, M. I., Khusnutdinova, E. K. & Fedorova, S. A., 1 Jan 2018, In: International Journal of Pediatric Otorhinolaryngology. 104, p. 94-97 4 p.

    Research output: Contribution to journalArticlepeer-review

  40. Ant13 Encodes Regulatory Factor WD40 Controlling Anthocyanin and Proanthocyanidin Synthesis in Barley (Hordeum vulgare L.)

    Shoeva, O. Y., Mukhanova, M. A., Zakhrabekova, S. & Hansson, M., 10 May 2023, In: Journal of agricultural and food chemistry. 71, 18, p. 6967-6977 11 p.

    Research output: Contribution to journalArticlepeer-review

  41. Anthelmintic activity of antioxidants: In vitro effects on the liver fluke opisthorchis felineus

    Mordvinov, V. A., Ponomarev, D. V., Pakharukov, Y. V. & Pakharukova, M. Y., Mar 2021, In: Pathogens. 10, 3, p. 1-12 12 p., 284.

    Research output: Contribution to journalArticlepeer-review

  42. Anthelmintic activity of cytochrome P450 inhibitors miconazole and clotrimazole: in-vitro effect on the liver fluke Opisthorchis felineus

    Mordvinov, V. A., Shilov, A. G. & Pakharukova, M. Y., 1 Jul 2017, In: International Journal of Antimicrobial Agents. 50, 1, p. 97-100 4 p.

    Research output: Contribution to journalArticlepeer-review

  43. Anthocyanins participate in protection of wheat seedlings from osmotic stress

    Shoeva, O. Y., Gordeeva, E. I., Arbuzova, V. S. & Khlestkina, E. K., 1 Mar 2017, In: Cereal Research Communications. 45, 1, p. 47-56 10 p.

    Research output: Contribution to journalArticlepeer-review

  44. Anthocyanins participate in the protection of wheat seedlings against cadmium stress

    Shoeva, O. Y. & Khlestkina, E. K., 1 Jun 2018, In: Cereal Research Communications. 46, 2, p. 242-252 11 p.

    Research output: Contribution to journalArticlepeer-review

  45. Antimetastatic Activity of Combined Topotecan and Tyrosyl-DNA Phosphodiesterase-1 Inhibitor on Modeled Lewis Lung Carcinoma

    Koldysheva, E. V., Men’shchikova, A. P., Lushnikova, E. L., Popova, N. A., Kaledin, V. I., Nikolin, V. P., Zakharenko, A. L., Luzina, O. A., Salakhutdinov, N. F. & Lavrik, O. I., 15 Mar 2019, In: Bulletin of Experimental Biology and Medicine. 166, 5, p. 661-666 6 p.

    Research output: Contribution to journalArticlepeer-review

  46. Antimetastatic Effect of Liposomal Recombinant Lactaptin

    Kaledin, V. I., Koval, O. A., Kuligina, E. V., Lushnikova, E. L., Nikolin, V. P., Popova, N. A., Pyshnaya, I. A. & Richter, V. A., Apr 2018, In: Bulletin of Experimental Biology and Medicine. 164, 6, p. 762-765 4 p.

    Research output: Contribution to journalArticlepeer-review

  47. Antioxidants resveratrol and SkQ1 attenuate praziquantel adverse effects on the liver in Opisthorchis felineus infected hamsters

    Zaparina, O., Rakhmetova, A. S., Kolosova, N. G., Cheng, G., Mordvinov, V. A. & Pakharukova, M. Y., Aug 2021, In: Acta Tropica. 220, 105954.

    Research output: Contribution to journalArticlepeer-review

  48. Antitumor Activity of the Combination of Topotecan and Tyrosyl-DNA-Phosphodiesterase 1 Inhibitor on Model Krebs-2 Mouse Ascite Carcinoma

    Dyrkheeva, N. S., Zakharenko, A. L., Novoselova, E. S., Chepanova, A. A., Popova, N. A., Nikolin, V. P., Luzina, O. A., Salakhutdinov, N. F., Ryabchikova, E. I. & Lavrik, O. I., Mar 2021, In: Molecular Biology. 55, 2, p. 273-277 5 p.

    Research output: Contribution to journalArticlepeer-review

  49. Antitumor efficacy of multi-target in situ vaccinations with CpG oligodeoxynucleotides, anti-OX40, anti-PD1 antibodies, and aptamers

    Proskurina, A. S., Рузанова, В. С., Риттер, Г. С., Ефремов, Я. Р., Mustafin, Z. S., Лашин, С. А., Буракова, Е. А., Фокина, А. А., Zatsepin, T. S., Стеценко, Д. А., Леплина, О. Ю., Останин, А. А., Черных, Е. Р. & Bogachev, S. S., 2023, In: Journal of Biomedical Research. 37, 3, p. 194-212 19 p.

    Research output: Contribution to journalArticlepeer-review

  50. Approbation of the Cancer Treatment Approach Based on the Eradication of TAMRA+ Cancer Stem Cells in a Model of Murine Cyclophosphamide Resistant Lymphosarcoma

    Kisaretova, P. E., Kirikovich, S. S., Ritter, G. S., Efremov, Y. R., Taranov, O. S., Dubatolova, T. D., Proskurina, A. S., Potter, E. A., Dolgova, E. V., Sidorov, S. V., Ostanin, A. A., Chernych, E. R. & Bogachev, S. S., 1 Feb 2020, In: Anticancer research. 40, 2, p. 795-805 11 p.

    Research output: Contribution to journalArticlepeer-review

  51. A protocol for recruiting and analyzing the disease-oriented Russian disc degeneration study (RuDDS) biobank for functional omics studies of lumbar disc degeneration

    Leonova, O. N., Elgaeva, E. E., Golubeva, T. S., Peleganchuk, A. V., Krutko, A. V., Aulchenko, Y. S. & Tsepilov, Y. A., May 2022, In: PLoS ONE. 17, 5, e0267384.

    Research output: Contribution to journalArticlepeer-review

  52. A Putative Locus for Cranial-Size Variability of the Fox (Vulpes vulpes)

    Kharlamova, A. V., Shikhevich, S. G., Vladimirova, A. V., Kukekova, A. V. & Efimov, V. M., May 2023, In: Russian Journal of Genetics. 59, 5, p. 466-482 17 p.

    Research output: Contribution to journalArticlepeer-review

  53. A rare case of Waardenburg syndrome with unilateral hearing loss caused by nonsense variant c.772C>T (p.Arg259*) in the MITF gene in Yakut patient from the Eastern Siberia (Sakha Republic, Russia)

    Barashkov, N. A., Romanov, G. P., Borisova, U. P., Solovyev, A. V., Pshennikova, V. G., Teryutin, F. M., Bondar, A. A., Morozov, I. V., Khusnutdinova, E. K., Posukh, O. L., Burtseva, T. E., Odland, J. Ø. & Fedorova, S. A., 1 Jan 2019, In: International Journal of Circumpolar Health. 78, 1, p. 1630219 1630219.

    Research output: Contribution to journalArticlepeer-review

  54. Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis

    Freire-Rios, A., Tanaka, K., Crespo, I., Van der Wijk, E., Sizentsova, Y., Levitsky, V., Lindhoud, S., Fontana, M., Hohlbein, J., Roeland Boer, D., Mironova, V. & Weijers, D., 29 Sept 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 39, p. 24557-24566 10 p.

    Research output: Contribution to journalArticlepeer-review

  55. Argo_CUDA: Exhaustive GPU based approach for motif discovery in large DNA datasets

    Vishnevsky, O. V., Bocharnikov, A. V. & Kolchanov, N. A., 1 Feb 2018, In: Journal of Bioinformatics and Computational Biology. 16, 1, 23 p., 1740012.

    Research output: Contribution to journalArticlepeer-review

  56. A Sacrifice-for-Survival Mechanism Protects Root Stem Cell Niche from Chilling Stress

    Hong, J. H., Savina, M., Du, J., Devendran, A., Kannivadi Ramakanth, K., Tian, X., Sim, W. S., Mironova, V. V. & Xu, J., 29 Jun 2017, In: Cell. 170, 1, p. 102-113.e14 11 p.

    Research output: Contribution to journalArticlepeer-review

  57. A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package

    Levitsky, V., Zemlyanskaya, E., Oshchepkov, D., Podkolodnaya, O., Ignatieva, E., Grosse, I., Mironova, V. & Merkulova, T., 2 Dec 2019, In: Nucleic Acids Research. 47, 21, p. e139 14 p.

    Research output: Contribution to journalArticlepeer-review

  58. ASIP Promoter Variants Predict the Sesame Coat Color in Shiba Inu Dogs

    Belyakin, S. N., Maksimov, D. A., Pobedintseva, M. A., Laktionov, P. P. & Voronova, D., May 2022, In: Veterinary Sciences. 9, 5, 222.

    Research output: Contribution to journalArticlepeer-review

  59. A Spontaneous Inversion of the X Chromosome Heterochromatin Provides a Tool for Studying the Structure and Activity of the Nucleolus in Drosophila melanogaster

    Kolesnikova, T. D., Klenov, M. S., Nokhova, A. R., Lavrov, S. A., Pokholkova, G. V., Schubert, V., Maltseva, S. V., Cook, K. R., Dixon, M. J. & Zhimulev, I. F., Dec 2022, In: Cells. 11, 23, 3872.

    Research output: Contribution to journalArticlepeer-review

  60. Assembly and Analysis of Plastomes for 15 Potato Cultivars Grown in Russia

    Karetnikov, D. I., Salina, E. A., Kochetov, A. V. & Afonnikov, D. A., Jun 2023, In: Agronomy. 13, 6, 1454.

    Research output: Contribution to journalArticlepeer-review

  61. Association between the effects of high temperature on fertility and sleep in female intra-specific hybrids of Drosophila melanogaster

    Zakharenko, L. P., Petrovskii, D. V., Dorogova, N. V. & Putilov, A. A., Apr 2021, In: Insects. 12, 4, 336.

    Research output: Contribution to journalArticlepeer-review

  62. A stonefly species extinct in Europe (Taeniopteryx araneoides Klapalek, 1902, Taeniopterygidae, Plecoptera) is thriving in the Irtysh River in West Siberia and North Kazakhstan

    Kosterin, O. E., Akimbekova, N., Dubatolov, V. V. & Sivec, I., 27 Mar 2017, In: Zootaxa. 4247, 2, p. 141-148 8 p.

    Research output: Contribution to journalArticlepeer-review

  63. A study of tribendimidine effects in vitro and in vivo on the liver fluke Opisthorchis felineus

    Pakharukova, M. Y., Samsonov, V. A., Serbina, E. A. & Mordvinov, V. A., 11 Jan 2019, In: Parasites and Vectors. 12, 1, p. 23 6 p., 23.

    Research output: Contribution to journalArticlepeer-review

  64. A tumorigenic cell line derived from a hamster cholangiocarcinoma associated with Opisthorchis felineus liver fluke infection

    Mordvinov, V. A., Minkova, G. A., Kovner, A. V., Ponomarev, D. V., Lvova, M. N., Zaparina, O., Romanenko, S. A., Shilov, A. G. & Pakharukova, M. Y., 15 Jul 2021, In: Life Sciences. 277, p. 119494 119494.

    Research output: Contribution to journalArticlepeer-review

  65. Autosomal recessive cataract (CTRCT18) in the Yakut population isolate of Eastern Siberia: a novel founder variant in the FYCO1 gene

    Barashkov, N. A., Konovalov, F. A., Borisova, T. V., Teryutin, F. M., Solovyev, A. V., Pshennikova, V. G., Sapojnikova, N. V., Vychuzhina, L. S., Romanov, G. P., Gotovtsev, N. N., Morozov, I. V., Bondar, A. A., Platonov, F. A., Burtseva, T. E., Khusnutdinova, E. K., Posukh, O. L. & Fedorova, S. A., Jun 2021, In: European journal of human genetics. 29, 6, p. 965-976 12 p.

    Research output: Contribution to journalArticlepeer-review

  66. Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots

    Omelyanchuk, N. A., Wiebe, D. S., Novikova, D. D., Levitsky, V. G., Klimova, N., Gorelova, V., Weinholdt, C., Vasiliev, G. V., Zemlyanskaya, E. V., Kolchanov, N. A., Kochetov, A. V., Grosse, I. & Mironova, V. V., 30 May 2017, In: Scientific Reports. 7, 1, p. 2489 11 p., 2489.

    Research output: Contribution to journalArticlepeer-review

  67. B chromosomes in grasshoppers: Different origins and pathways to the modern Bs

    Jetybayev, I. Y., Bugrov, A. G., Dzyubenko, V. V. & Rubtsov, N. B., 18 Oct 2018, In: Genes. 9, 10, 19 p., 509.

    Research output: Contribution to journalArticlepeer-review

  68. B chromosomes of the asian seabass (Lates calcarifer) contribute to genome variations at the level of individuals and populations

    Komissarov, A., Vij, S., Yurchenko, A., Trifonov, V., Thevasagayam, N., Saju, J., Sridatta, P. S. R., Purushothaman, K., Graphodatsky, A., Orbán, L. & Kuznetsova, I., 20 Sept 2018, In: Genes. 9, 10, p. 1.-15 15 p., 464.

    Research output: Contribution to journalArticlepeer-review

  69. Behavioral effects and inflammatory markers in the brain and periphery after repeated social defeat stress burdened by Opisthorchis felineus infection in mice

    Avgustinovich, D. F., Tenditnik, M. V., Bondar, N. P., Marenina, M. K., Zhanaeva, S. Y., Lvova, M. N., Katokhin, A. V., Pavlov, K. S., Evseenko, V. I. & Tolstikova, T. G., 1 Aug 2022, In: Physiology and Behavior. 252, 113846.

    Research output: Contribution to journalArticlepeer-review

  70. Cancer stem cells: Emergent nature of tumor emergency

    Efremov, Y. R., Proskurina, A. S., Potter, E. A., Dolgova, E. V., Efremova, O. V., Taranov, O. S., Ostanin, A. A., Chernykh, E. R., Kolchanov, N. A. & Bogachev, S. S., 16 Nov 2018, In: Frontiers in Genetics. 9, 544.

    Research output: Contribution to journalArticlepeer-review

  71. Candidate genes for age at menarche are associated with endometriosis

    Ponomarenko, I., Reshetnikov, E., Polonikov, A., Verzilina, I., Sorokina, I., Elgaeva, E. E., Tsepilov, Y. A., Yermachenko, A., Dvornyk, V. & Churnosov, M., Nov 2020, In: Reproductive BioMedicine Online. 41, 5, p. 943-956 14 p.

    Research output: Contribution to journalArticlepeer-review

  72. Candidate snp markers of atherogenesis significantly shifting the affinity of TATA-binding protein for human gene promoters show stabilizing natural selection as a sum of neutral drift accelerating atherogenesis and directional natural selection slowing it

    Ponomarenko, M., Rasskazov, D., Chadaeva, I., Sharypova, E., Drachkova, I., Oshchepkov, D., Ponomarenko, P., Savinkova, L., Oshchepkova, E., Nazarenko, M. & Kolchanov, N., 5 Feb 2020, In: International Journal of Molecular Sciences. 21, 3, 41 p., 1045.

    Research output: Contribution to journalArticlepeer-review

  73. Candidate SNP Markers of Atherosclerosis That May Significantly Change the Affinity of the TATA-Binding Protein for the Human Gene Promoters

    Ponomarenko, M. P., Rasskazov, D. A., Chadaeva, I. V., Sharypova, E. B., Drachkova, I. A., Ponomarenko, P. M., Oshchepkova, E. A., Savinkova, L. K. & Kolchanov, N. A., 1 Sept 2019, In: Russian Journal of Genetics. 55, 9, p. 1137-1151 15 p.

    Research output: Contribution to journalArticlepeer-review

  74. Candidate SNP markers of familial and sporadic Alzheimer's diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Ponomarenko, P., Chadaeva, I., Rasskazov, D. A., Sharypova, E., Kashina, E. V., Drachkova, I., Zhechev, D., Ponomarenko, M. P., Savinkova, L. K. & Kolchanov, N., 20 Jul 2017, In: Frontiers in Aging Neuroscience. 9, JUL, p. 231 24 p., 231.

    Research output: Contribution to journalArticlepeer-review

  75. Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

    Chadaeva, I. V., Ponomarenko, P. M., Rasskazov, D. A., Sharypova, E. B., Kashina, E. V., Zhechev, D. A., Drachkova, I. A., Arkova, O. V., Savinkova, L. K., Ponomarenko, M. P., Kolchanov, N. A., Osadchuk, L. V. & Osadchuk, A. V., 9 Feb 2018, In: BMC Genomics. 19, Suppl 3, p. 0 23 p., 0.

    Research output: Contribution to journalArticlepeer-review

  76. Candidate SNP-markers of rheumatoid arthritis that can significantly alter the affinity of the TATA-binding protein for human gene promoters

    Chadaeva, I. V., Rasskazov, D. A., Sharypova, E. B., Drachkova, I. A., Oshchepkova, E. A., Savinkova, L. K., Ponomarenko, P. M., Ponomarenko, M. P., Kolchanov, N. A. & Kozlov, V. A., 1 Aug 2019, In: Вавиловский журнал генетики и селекции. 23, 8, p. 1047-1058 12 p.

    Research output: Contribution to journalArticlepeer-review

  77. Capturing Auxin Response Factors Syntax Using DNA Binding Models

    Stigliani, A., Martin-Arevalillo, R., Lucas, J., Bessy, A., Vinos-Poyo, T., Mironova, V., Vernoux, T., Dumas, R. & Parcy, F., 3 Jun 2019, In: Molecular Plant. 12, 6, p. 822-832 11 p.

    Research output: Contribution to journalArticlepeer-review

  78. Carbonate Sedimentology of the Upper Riphean (Neoproterozoic) Uk Formation, Southern Urals

    Dub, S. A. & Grazhdankin, D. V., Nov 2021, In: Lithology and Mineral Resources. 56, 6, p. 487-508 22 p., 2.

    Research output: Contribution to journalArticlepeer-review

  79. Causal effects of psychosocial factors on chronic back pain: a bidirectional Mendelian randomisation study

    Williams, F. M. K., Elgaeva, E. E., Freidin, M. B., Zaytseva, O. O., Aulchenko, Y. S., Tsepilov, Y. A. & Suri, P., Jul 2022, In: European Spine Journal. 31, 7, p. 1906-1915 10 p.

    Research output: Contribution to journalArticlepeer-review

  80. Cell Dynamics in WOX5-Overexpressing Root Tips: The Impact of Local Auxin Biosynthesis

    Savina, M. S., Pasternak, T., Omelyanchuk, N. A., Novikova, D. D., Palme, K., Mironova, V. V. & Lavrekha, V. V., 22 Oct 2020, In: Frontiers in Plant Science. 11, 13 p., 560169.

    Research output: Contribution to journalArticlepeer-review

  81. Cell type-specific interpretation of noncoding variants using deep learning-based methods

    Sindeeva, M., Chekanov, N., Avetisian, M., Shashkova, T. I., Baranov, N., Malkin, E., Lapin, A., Kardymon, O. & Fishman, V., 20 Mar 2023, In: GigaScience. 12, p. 1-11 11 p., giad015.

    Research output: Contribution to journalArticlepeer-review

  82. Cellular aspects of gonadal atrophy in Drosophila P-M hybrid dysgenesis

    Dorogova, N. V., Bolobolova, E. U. & Zakharenko, L. P., 15 Apr 2017, In: Developmental Biology. 424, 2, p. 105-112 8 p.

    Research output: Contribution to journalArticlepeer-review

  83. Changes in cell differentiation and proliferation lead to production of abzymes in EAE mice treated with DNA–Histone complexes

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sedykh, S. E., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2018, In: Journal of Cellular and Molecular Medicine. 22, 12, p. 5816-5832 17 p.

    Research output: Contribution to journalArticlepeer-review

  84. Changes induced in mouse lipid metabolism by simultaneous impact of antisense oligonucleotide derivatives to apoB, PCSK9, and apoCIII mRNAs

    Oshevski, S. I., Ragino, Y. I., Kashtanova, E. V., Polonskaya, Y. V., Stakhneva, E. M., Nikolin, V. P., Popova, N. A., Kolchanov, N. A. & Voevoda, M. I., 1 Aug 2019, In: Вавиловский журнал генетики и селекции. 23, 8, p. 1020-1025 6 p.

    Research output: Contribution to journalArticlepeer-review

  85. Changes in haematopoietic progenitor colony differentiation and proliferation and the production of different abzymes in EAE mice treated with DNA

    Aulova, K. S., Toporkova, L. B., Lopatnikova, J. A., Alshevskaya, A. A., Sennikov, S. V., Buneva, V. N., Budde, T., Meuth, S. G., Popova, N. A., Orlovskaya, I. A. & Nevinsky, G. A., 1 Dec 2017, In: Journal of Cellular and Molecular Medicine. 21, 12, p. 3795-3809 15 p.

    Research output: Contribution to journalArticlepeer-review

  86. Changes in the Hippocampal Genes Transcriptome in Depression Model Mice upon Intranasal Exposure to M2 Macrophage Secretome Factors

    Shevela, E. Y., Markova, E. V., Knyazheva, M. A., Proskurina, A. S., Efremov, Y. R., Molodtsov, V. V., Seledtsov, I. A., Ostanin, A. A., Bogachev, S. S., Kolchanov, N. A. & Chernykh, E. R., 2020, In: Mathematical Biology and Bioinformatics. 15, 2, p. 357-393 37 p.

    Research output: Contribution to journalArticlepeer-review

  87. Changes in the number and morphology of blood cells in mice pretreated with RNA preparations and exposed to 8 Gy of gamma radiation

    Dubatolova, T. D., Ritter, G. S., Proskurina, A. S., Kisaretova, P. E., Nikolin, V. P., Popova, N. A., Ruzanova, V. S., Taranov, O. S., Kolchanov, N. A. & Bogachev, S. S., 2022, In: International Journal of Radiation Research. 20, 2, p. 361-368 8 p.

    Research output: Contribution to journalArticlepeer-review

  88. Characteristics and fertility of domestic cat epididymal spermatozoa cryopreserved with two different freezing media

    Brusentsev, E., Kizilova, E., Mokrousova, V., Kozhevnikova, V., Rozhkova, I. & Amstislavsky, S., 1 Apr 2018, In: Theriogenology. 110, p. 148-152 5 p.

    Research output: Contribution to journalArticlepeer-review

  89. Characteristics of liver fibrosis associated with chronic Opisthorchis felineus infection in Syrian hamsters and humans

    Kovner, A. V., Pakharukova, M. Y., Maksimova, G. A. & Mordvinov, V. A., 1 Oct 2019, In: Experimental and Molecular Pathology. 110, p. 104274 5 p., 104274.

    Research output: Contribution to journalArticlepeer-review

  90. Characterization of biological peculiarities of the radioprotective activity of double-stranded RNA isolated from Saccharomyces сerevisiae

    Ritter, G. S., Nikolin, V. P., Popova, N. A., Proskurina, A. S., Kisaretova, P. E., Taranov, O. S., Dubatolova, T. D., Dolgova, E. V., Potter, E. A., Kirikovich, S. S., Efremov, Y. R., Bayborodin, S. I., Romanenko, M. V., Meschaninova, M. I., Venyaminova, A. G., Kolchanov, N. A., Shurdov, M. A. & Bogachev, S. S., 1 Sept 2020, In: International Journal of Radiation Biology. 96, 9, p. 1173-1191 19 p.

    Research output: Contribution to journalArticlepeer-review

  91. Check-list of Odonata of the Russian Federation

    Malikova, E. I. & Kosterin, O. E., 1 Jun 2019, In: Odonatologica. 48, 1-2, p. 49-78 30 p.

    Research output: Contribution to journalArticlepeer-review

  92. Chromosome distribution of highly conserved tandemly arranged repetitive dnas in the siberian sturgeon (Acipenser baerii)

    Biltueva, L. S., Prokopov, D. Y., Romanenko, S. A., Interesova, E. A., Schartl, M. & Trifonov, V. A., Nov 2020, In: Genes. 11, 11, p. 1-18 18 p., 1375.

    Research output: Contribution to journalArticlepeer-review

  93. Chromosome evolution in the free-living flatworms: First evidence of intrachromosomal rearrangements in karyotype evolution of macrostomum lignano (platyhelminthes, macrostomida)

    Zadesenets, K. S., Ershov, N. I., Berezikov, E. & Rubtsov, N. B., 30 Oct 2017, In: Genes. 8, 11, 14 p., 298.

    Research output: Contribution to journalArticlepeer-review

  94. Chromosome morphometry in opisthorchiid species (Platyhelminthes, Trematoda)

    Zadesenets, K. S., Polyakov, A. V., Katokhin, A. V., Mordvinov, V. A. & Rubtsov, N. B., 1 Aug 2017, In: Parasitology International. 66, 4, p. 396-401 6 p.

    Research output: Contribution to journalArticlepeer-review

  95. Chromosome painting does not support a sex chromosome turnover in lacerta agilis linnaeus, 1758

    Lisachov, A. P., Giovannotti, M., Pereira, J. C., Andreyushkova, D. A., Romanenko, S. A., Ferguson-Smith, M. A., Borodin, P. M. & Trifonov, V. A., 1 Apr 2020, In: Cytogenetic and Genome Research. 160, 3, p. 134-140 7 p.

    Research output: Contribution to journalArticlepeer-review

  96. Chromosomes and speciation in tuco-tuco (Ctenomys, Hystricognathi, Rodentia)

    Torgasheva, A. A., Basheva, E. A., Gómez Fernández, M. J., Mirol, P. & Borodin, P. M., 1 Jun 2017, In: Russian Journal of Genetics: Applied Research. 7, 4, p. 350-357 8 p.

    Research output: Contribution to journalArticlepeer-review

  97. Chromosome synapsis and recombination in male hybrids between two chromosome races of the common shrew (Sorex araneus L., Soricidae, Eulipotyphla)

    Belonogova, N. M., Polyakov, A. V., Karamysheva, T. V., Torgasheva, A. A., Searle, J. B. & Borodin, P. M., 20 Oct 2017, In: Genes. 8, 10, 15 p., 282.

    Research output: Contribution to journalArticlepeer-review

  98. Chromosome synapsis and recombination in male-sterile and female-fertile interspecies hybrids of the dwarf hamsters (Phodopus, cricetidae)

    Bikchurina, T. I., Tishakova, K. V., Kizilova, E. A., Romanenko, S. A., Serdyukova, N. A., Torgasheva, A. A. & Borodin, P. M., 25 Apr 2018, In: Genes. 9, 5, 15 p., 227.

    Research output: Contribution to journalArticlepeer-review

  99. Chromosome synapsis, recombination and epigenetic modification in rams heterozygous for metacentric chromosome 3 of the domestic sheep Ovis aries and acrocentric homologs of the argali Ovis ammon

    Bikchurina, T. I., Tomgorova, E. K., Torgasheva, A. A., Bagirov, V. A., Volkova, N. A. & Borodin, P. M., 1 Jan 2019, In: Вавиловский журнал генетики и селекции. 23, 3, p. 355-361 7 p.

    Research output: Contribution to journalArticlepeer-review

  100. Chronometric Administration of Cyclophosphamide and a Double-Stranded DNA-Mix at Interstrand Crosslinks Repair Timing, Called “Karanahan” Therapy, Is Highly Efficient in a Weakly Immunogenic Lewis Carcinoma Model

    Ruzanova, V., Proskurina, A., Efremov, Y., Kirikovich, S., Ritter, G., Levites, E., Dolgova, E., Potter, E., Babaeva, O., Sidorov, S., Taranov, O., Ostanin, A., Chernykh, E. & Bogachev, S., 27 May 2022, In: Pathology and Oncology Research. 28, 1610180.

    Research output: Contribution to journalArticlepeer-review

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