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  2. 3D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin

    Fishman, V., Battulin, N., Nuriddinov, M., Maslova, A., Zlotina, A., Strunov, A., Chervyakova, D., Korablev, A., Serov, O. & Krasikova, A., 25 Jan 2019, In: Nucleic Acids Research. 47, 2, p. 648-665 18 p.

    Research output: Contribution to journal › Article › peer-review

  3. Absence of EGFR C797S Mutation in Tyrosine Kinase Inhibitor-Naïve Non–Small Cell Lung Cancer Tissues

    Oscorbin, I. P., Shadrina, A. S., Kozlov, V. V., Voitsitsky, V. E. & Filipenko, M. L., 1 Apr 2020, In: Pathology and Oncology Research. 26, 2, p. 1229-1234 6 p.

    Research output: Contribution to journal › Article › peer-review

  4. A cookbook for DNase Hi-C

    Gridina, M., Mozheiko, E., Valeev, E., Nazarenko, L. P., Lopatkina, M. E., Markova, Z. G., Yablonskaya, M. I., Voinova, V. Y., Shilova, N. V., Lebedev, I. N. & Fishman, V., 20 Mar 2021, In: Epigenetics and Chromatin. 14, 1, 15.

    Research output: Contribution to journal › Article › peer-review

  5. Adenomyosis: Genetics of estrogen metabolism

    Artymuk, N., Zotova, O. & Gulyaeva, L., 15 Mar 2019, In: Hormone Molecular Biology and Clinical Investigation. 37, 2, 6 p., 20180069.

    Research output: Contribution to journal › Article › peer-review

  6. A mosaic intragenic microduplication of LAMA1 and a constitutional 18p11.32 microduplication in a patient with keratosis pilaris and intellectual disability

    Kashevarova, A. A., Nazarenko, L. P., Skryabin, N. A., Nikitina, T. V., Vasilyev, S. A., Tolmacheva, E. N., Lopatkina, M. E., Salyukova, O. A., Chechetkina, N. N., Vorotelyak, E. A., Kalabusheva, E. P., Fishman, V. S., Kzhyshkowska, J., Graziano, C., Magini, P., Romeo, G. & Lebedev, I. N., 1 Nov 2018, In: American Journal of Medical Genetics, Part A. 176, 11, p. 2395-2403 9 p.

    Research output: Contribution to journal › Article › peer-review

  7. Analysis of differential expression of matrix metalloproteases in stable and unstable atherosclerotic lesions by a method of full genome sequencing of RNA: Pilot study

    Ivanoschuk, D. E., Ragino, Y. I., Shakhtshneider, E. V., Mikhailova, S. V., Fishman, V. S., Polonskaya, Y. V., Kashtanova, E. V., Chernyavsky, A. M., Murashov, I. S. & Voevoda, M. I., 1 Jan 2018, In: Russian Journal of Cardiology. 23, 8, p. 52-58 7 p.

    Research output: Contribution to journal › Article › peer-review

  8. Analysis of Prolactin Receptor Expression in Breast Cancer Subtypes

    Kalinina, T. S., Kononchuk, V. V., Sidorov, S. V. & Gulyaeva, L. F., Jul 2020, In: Biochemistry (Moscow) Supplement Series B: Biomedical Chemistry. 14, 3, p. 266-271 6 p.

    Research output: Contribution to journal › Article › peer-review

  9. An inexpensive, simple and effective method of genome DNA fragmentation for NGS libraries

    Kechin, A., Boldyreva, D., Borobova, V., Boyarskikh, U., Scherbak, S., Apalko, S., Makarova, M., Mosyakin, N., Kaftyreva, L. & Filipenko, M., 1 Nov 2021, In: Journal of biochemistry. 170, 5, p. 675-681 7 p.

    Research output: Contribution to journal › Article › peer-review

  10. Anti-inflammatory Effects of Variola Virus TNF Decoy Receptor in an Experimental Model of Contact Dermatitis

    Viazovaia, E. A., Gileva, I. P., Toporkova, L. B., Shchelkunov, S. N. & Orlovskaya, I. A., 1 Jan 2019, In: Current Pharmaceutical Biotechnology. 19, 11, p. 910-916 7 p.

    Research output: Contribution to journal › Article › peer-review

  11. Appearances are deceptive: Three RNA viruses co-infected with the nucleopolyhedrovirus in host Lymantria dispar

    Pavlushin, S. V., Ilinsky, Y. Y., Belousova, I. A., Bayborodin, S. I., Lunev, E. A., Kechin, A. A., Khrapov, E. A., Filipenko, M. L., Toshchakov, S. V. & Martemyanov, V. V., May 2021, In: Virus Research. 297, 198371.

    Research output: Contribution to journal › Article › peer-review

  12. A rare case of severe hemophilia b combined with hematomesenchymal dysplasia

    Muratova, F., Mussabekova, Z., Kazymov, M. & Sturov, V., 15 Apr 2021, In: Open Access Macedonian Journal of Medical Sciences. 9, p. 47-51 5 p.

    Research output: Contribution to journal › Article › peer-review

  13. A spectrum of BRCA1 and BRCA2 germline deleterious variants in ovarian cancer in Russia

    Kechin, A., Boyarskikh, U., Barinov, A., Tanas, A., Kazakova, S., Zhevlova, A., Khrapov, E., Subbotin, S., Mishukova, O., Kekeeva, T., Demidova, I. & Filipenko, M., Jan 2023, In: Breast Cancer Research and Treatment. 197, 2, p. 387-395 9 p.

    Research output: Contribution to journal › Article › peer-review

  14. Association between Lymph Node Status and Expression Levels of Androgen Receptor, miR-185, miR-205, and miR-21 in Breast Cancer Subtypes

    Kalinina, T. S., Kononchuk, V. V., Yakovleva, A. K., Alekseenok, E. Y., Sidorov, S. V. & Gulyaeva, L. F., 23 Apr 2020, In: International Journal of Breast Cancer. 2020, 7 p., 3259393.

    Research output: Contribution to journal › Article › peer-review

  15. Associations between the levels of estradiol-, progesterone-, and testosterone-sensitive mirnas and main clinicopathologic features of breast cancer

    Kalinina, T., Kononchuk, V., Alekseenok, E., Abdullin, G., Sidorov, S., Ovchinnikov, V. & Gulyaeva, L., Jan 2022, In: Journal of Personalized Medicine. 12, 1, 4.

    Research output: Contribution to journal › Article › peer-review

  16. Autologous dendritic cells and activated cytotoxic T‑cells as combination therapy for breast cancer

    Shevchenko, J. A., Khristin, A. A., Kurilin, V. V., Kuznetsova, M. S., Blinova, D. D., Starostina, N. M., Sidorov, S. V. & Sennikov, S. V., Feb 2020, In: Oncology Reports. 43, 2, p. 671-680 10 p.

    Research output: Contribution to journal › Article › peer-review

  17. B chromosomes in grasshoppers: Different origins and pathways to the modern Bs

    Jetybayev, I. Y., Bugrov, A. G., Dzyubenko, V. V. & Rubtsov, N. B., 18 Oct 2018, In: Genes. 9, 10, 19 p., 509.

    Research output: Contribution to journal › Article › peer-review

  18. Blood Plasma Circulating DNA-Protein Complexes: Involvement in Carcinogenesis and Prospects for Liquid Biopsy of Breast Cancer

    Shefer, A., Tutanov, O., Belenikin, M., Tsentalovich, Y. P. & Tamkovich, S., Dec 2023, In: Journal of Personalized Medicine. 13, 12, 1691.

    Research output: Contribution to journal › Article › peer-review

  19. Blood Plasma Exosomes Contain Circulating DNA in Their Crown

    Tutanov, O., Shtam, T., Grigor’eva, A., Tupikin, A., Tsentalovich, Y. & Tamkovich, S., Apr 2022, In: Diagnostics. 12, 4, 854.

    Research output: Contribution to journal › Article › peer-review

  20. BRCA-analyzer: Automatic workflow for processing NGS reads of BRCA1 and BRCA2 genes

    Kechin, A., Khrapov, E., Boyarskikh, U., Kel, A. & Filipenko, M., 1 Dec 2018, In: Computational Biology and Chemistry. 77, p. 297-306 10 p.

    Research output: Contribution to journal › Article › peer-review

  21. Chemoradiotherapy increases intratumor heterogeneity of HPSE expression in the relapsed glioblastoma tumors

    Suhovskih, A. V., Kazanskaya, G. M., Volkov, A. M., Tsidulko, A. Y., Aidagulova, S. V. & Grigorieva, E. V., 14 Feb 2020, In: International Journal of Molecular Sciences. 21, 4, 9 p., 1301.

    Research output: Contribution to journal › Article › peer-review

  22. Chemotherapy-Induced Degradation of Glycosylated Components of the Brain Extracellular Matrix Promotes Glioblastoma Relapse Development in an Animal Model

    Tsidulko, A. Y., Shevelev, O. B., Khotskina, A. S., Kolpakova, M. A., Suhovskih, A. V., Kazanskaya, G. M., Volkov, A. M., Aidagulova, S. V., Zavyalov, E. L. & Grigorieva, E. V., 19 Jul 2021, In: Frontiers in Oncology. 11, 713139.

    Research output: Contribution to journal › Article › peer-review

  23. Chondroitin sulfate content and decorin expression in glioblastoma are associated with proliferative activity of glioma cells and disease prognosis

    Tsidulko, A. Y., Kazanskaya, G. M., Volkov, A. M., Suhovskih, A. V., Kiselev, R. S., Kobozev, V. V., Gaytan, A. S., Krivoshapkin, A. L., Aidagulova, S. V. & Grigorieva, E. V., 1 Jan 2020, In: Cell and Tissue Research. 379, 1, p. 147-155 9 p.

    Research output: Contribution to journal › Article › peer-review

  24. Chromosome morphometry in opisthorchiid species (Platyhelminthes, Trematoda)

    Zadesenets, K. S., Polyakov, A. V., Katokhin, A. V., Mordvinov, V. A. & Rubtsov, N. B., 1 Aug 2017, In: Parasitology International. 66, 4, p. 396-401 6 p.

    Research output: Contribution to journal › Article › peer-review

  25. C-InterSecture-a computational tool for interspecies comparison of genome architecture

    Nuriddinov, M. & Fishman, V., 1 Dec 2019, In: Bioinformatics (Oxford, England). 35, 23, p. 4912-4921 10 p.

    Research output: Contribution to journal › Article › peer-review

  26. Clusters of Repetitive DNA Sequences in Chromosomes of Voles of the Subgenus Microtus (Microtus, Arvicolidae)

    Rubtsova, N. V., Karamysheva, T. V. & Rubtsov, N. B., 1 Sept 2019, In: Russian Journal of Genetics. 55, 9, p. 1093-1102 10 p.

    Research output: Contribution to journal › Article › peer-review

  27. Co-expression of membrane-bound TNF-alpha type 1 and 2 receptors differ in the subsets of immunocompetent cells

    Sennikov, S., Alshevskaya, A., Zhukova, J., Belomestnova, I., Karaulov, A., Evsegneeva, I. & Lopatnikova, J., 1 Mar 2019, In: Immunology Letters. 207, p. 1-5 5 p.

    Research output: Contribution to journal › Article › peer-review

  28. Co-Expression of Membrane-Bound Tumor Necrosis Factor-Alpha Receptor Types 1 and 2 by Tumor Cell Lines

    Alshevskaya, A. A., Belomestnova, I., Lopatnikova, J. A., Zhukova, J., Evsegneeva, I., Koneva, O., Karaulov, A. V. & Sennikov, S. V., 1 Apr 2020, In: International Archives of Allergy and Immunology. 181, 4, p. 249-256 8 p.

    Research output: Contribution to journal › Article › peer-review

  29. Co-expression profile of TNF membrane-bound receptors type 1 and 2 in rheumatoid arthritis on immunocompetent cells subsets

    Alshevskaya, A., Lopatnikova, J., Zhukova, J., Chumasova, O., Shkaruba, N., Sizikov, A., Evsegneeva, I., Gladkikh, V., Karaulov, A. & Sennikov, S. V., 1 Jan 2020, In: International Journal of Molecular Sciences. 21, 1, 13 p., 288.

    Research output: Contribution to journal › Article › peer-review

  30. Comparative Analysis of Molecular Functions and Biological Role of Proteins from Cell-Free DNA-Protein Complexes Circulating in Plasma of Healthy Females and Breast Cancer Patients

    Tutanov, O., Shefer, A., Tsentalovich, Y. & Tamkovich, S., 14 Apr 2023, In: International Journal of Molecular Sciences. 24, 8, 7279.

    Research output: Contribution to journal › Article › peer-review

  31. Comparative Analysis of Tumor-Associated microRNAs and Tetraspanines from Exosomes of Plasma and Ascitic Fluids of Ovarian Cancer Patients

    Yunusova, N., Dzhugashvili, E., Yalovaya, A., Kolomiets, L., Shefer, A., Grigor'eva, A., Tupikin, A., Kondakova, I. & Tamkovich, S., Jan 2023, In: International Journal of Molecular Sciences. 24, 1, 464.

    Research output: Contribution to journal › Article › peer-review

  32. Comparative assessment of the exosomal tumor-associated microRNA levels in blood plasma and ascitic fluid in ovarian cancer patients

    Dzhugashvili, E. I., Yunusova, N. V., Yalovaya, A. I., Grigorieva, A. E., Sereda, E. E., Kolomiets, L. A. & Tamkovich, S. N., 2023, In: Uspehi Molekularnoj Onkologii. 10, 2, p. 108-116 9 p.

    Research output: Contribution to journal › Article › peer-review

  33. Comparison of CD4+CD25hiFoxP3+ Treg Induction by pIL-10-Transfected Dendritic Cells in Different Mouse Strains

    Khantakova, J., Tereshchenko, V., Kurilin, V., Silkov, A., Maksyutov, A., Lopatnikova, J., Shevchenko, J., Knauer, N., Kulikova, E. & Sennikov, S., 1 Sept 2019, In: Journal of Interferon and Cytokine Research. 39, 9, p. 531-538 8 p.

    Research output: Contribution to journal › Article › peer-review

  34. Constitutive Androstane Receptor Agonist Initiates Metabolic Activity Required for Hepatocyte Proliferation

    Mazin, M. E., Perevalova, A. M., Yarushkin, A. A., Pustylnyak, Y. A., Rogachev, A. D., Prokopyeva, E. A., Gulyaeva, L. F. & Pustylnyak, V. O., Aug 2023, In: Biochemistry (Moscow). 88, 8, p. 1061-1069 9 p.

    Research output: Contribution to journal › Article › peer-review

  35. Conventional anti-glioblastoma chemotherapy affects proteoglycan composition of brain extracellular matrix in rat experimental model in vivo

    Tsidulko, A. Y., Bezier, C., De La Bourdonnaye, G., Suhovskih, A. V., Pankova, T. M., Kazanskaya, G. M., Aidagulova, S. V. & Grigorieva, E. V., 2 Oct 2018, In: Frontiers in Pharmacology. 9, OCT, p. 1104 13 p., 1104.

    Research output: Contribution to journal › Article › peer-review

  36. Cytotoxic Activity and Memory T Cell Subset Distribution of in vitro-Stimulated CD8+ T Cells Specific for HER2/neu Epitopes

    Kuznetsova, M., Lopatnikova, J., Shevchenko, J., Silkov, A., Maksyutov, A. & Sennikov, S., 9 May 2019, In: Frontiers in Immunology. 10, MAY, p. 1017 12 p., 1017.

    Research output: Contribution to journal › Article › peer-review

  37. Defective regulation of membrane TNFα expression in dendritic cells of glioblastoma patients leads to the impairment of cytotoxic activity against autologous tumor cells

    Tyrinova, T., Leplina, O., Mishinov, S., Tikhonova, M., Dolgova, E., Proskurina, A., Stupack, V., Bogachev, S., Ostanin, A. & Chernykh, E., 21 Apr 2020, In: International Journal of Molecular Sciences. 21, 8, 19 p., 2898.

    Research output: Contribution to journal › Article › peer-review

  38. Dendritic Cells Transfected with MHC Antigenic Determinants of CBA Mice Induce Antigen-Specific Tolerance in C57Bl/6 Mice

    Sennikov, S. V., Tereshchenko, V. P., Kurilin, V. V., Shevchenko, J. A., Lopatnikova, J. A., Silkov, A. N., Maksyutov, A. Z., Kuznetsova, M. S., Knauer, N. Y., Bulygin, A. S. & Khantakova, J. N., 4 Sept 2020, In: Journal of Immunology Research. 2020, p. 9686143 13 p., 9686143.

    Research output: Contribution to journal › Article › peer-review

  39. Derivation of Ringed Seal (Phoca hispida) Induced Multipotent Stem Cells

    Beklemisheva, V. R., Belokopytova, P. S., Fishman, V. S. & Menzorov, A. G., 1 Dec 2021, In: Cellular reprogramming. 23, 6, p. 326-335 10 p.

    Research output: Contribution to journal › Article › peer-review

  40. Design, Synthesis and Assay of Novel Methylxanthine-Alkynylmethylamine Derivatives as Acetylcholinesterase Inhibitors

    Reshetnikov, D. V., Ivanov, I. D., Baev, D. S., Rybalova, T. V., Mozhaitsev, E. S., Patrushev, S. S., Vavilin, V. A., Tolstikova, T. G. & Shults, E. E., 11 Dec 2022, In: Molecules (Basel, Switzerland). 27, 24, 8787.

    Research output: Contribution to journal › Article › peer-review

  41. Detection of Point Mutations and Chromosomal Translocations Based on Massive Parallel Sequencing of Enriched 3C Libraries

    Mozheiko, E. A. & Fishman, V. S., 1 Oct 2019, In: Russian Journal of Genetics. 55, 10, p. 1273-1281 9 p.

    Research output: Contribution to journal › Article › peer-review

  42. Determining reference ranges for TREC and KREC assays in immune deficiency screening of newborns in Russian Federation

    Gordukova, M. A., Korsunsky, I. A., Chursinova, Y. V., Byakhova, M. M., Oscorbin, I. P., Prodeus, A. P. & Filipenko, M. L., 1 Jan 2019, In: Medical Immunology (Russia). 21, 3, p. 527-538 12 p.

    Research output: Contribution to journal › Article › peer-review

  43. Development of software and modification of Q-FISH protocol for estimation of individual telomere length in immunopathology

    Barkovskaya, M. S., Bogomolov, A. G., Knauer, N. Y., Rubtsov, N. B. & Kozlov, V. A., 1 Apr 2017, In: Journal of Bioinformatics and Computational Biology. 15, 2, 18 p., 1650041.

    Research output: Contribution to journal › Article › peer-review

  44. Differentially expressed genes in lower limb varicose vein disease

    Smetanina, M. A., Sipin, F. A., Seliverstov, E. I., Zolotukhin, I. A. & Filipenko, M. L., 1 Jan 2020, In: Flebologiya. 14, 2, p. 122-134 13 p.

    Research output: Contribution to journal › Article › peer-review

  45. DNA barcoding reveals that injected transgenes are predominantly processed by homologous recombination in mouse zygote

    Smirnov, A., Fishman, V., Yunusova, A., Korablev, A., Serova, I., Skryabin, B. V., Rozhdestvensky, T. S. & Battulin, N., 24 Jan 2020, In: Nucleic Acids Research. 48, 2, p. 719-735 17 p.

    Research output: Contribution to journal › Article › peer-review

  46. Do Sputnik V Vaccine-Induced Antibodies Protect Against Seasonal Coronaviruses? Case Study

    Koryukov, M., Kechin, A., Shamovskaya, D., Timofeeva, A. & Filipenko, M., Mar 2022, In: Viral Immunology. 35, 2, p. 138-141 4 p.

    Research output: Contribution to journal › Article › peer-review

  47. Downregulation of Acat1 by miR-21 may participate in liver fibrosis upon chronic DDT exposure

    Chanyshev, M. D., Yarushkin, A. A., Koldysheva, E. V., Lushnikova, E. L. & Gulyaeva, L. F., 12 Oct 2020, In: Toxicology Mechanisms and Methods. 30, 8, p. 562-569 8 p.

    Research output: Contribution to journal › Article › peer-review

  48. Effect of benzo[a]pyrene on the expression of miR-126, miR-190a and their target genes EGFL7, TP53INP1 and PHLPP1 in primary endometrial cells

    Chanyshev, M. D., Koval, O. A., Nushtaeva, A. A. & Gulyaeva, L. F., 1 Jun 2019, In: Journal of Biochemical and Molecular Toxicology. 33, 6, 6 p., e22314.

    Research output: Contribution to journal › Article › peer-review

  49. Effect of Benzo(a)pyrene on the Expression of miR-483-3p in Hepatocyte Primary Culture and Rat Liver

    Filippov, S. V., Yarushkin, A. A., Kalinina, T. S., Ovchinnikov, V. Y., Knyazev, R. A. & Gulyaeva, L. F., 1 Oct 2019, In: Biochemistry (Moscow). 84, 10, p. 1197-1203 7 p.

    Research output: Contribution to journal › Article › peer-review

  50. Effects of Endocrine Disruptors o,p′-Dichlorodiphenyltrichloroethane, p,p′-Dichlorodiphenyltrichloroethane, and Endosulfan on the Expression of Estradiol-, Progesterone-, and Testosterone-Responsive MicroRNAs and Their Target Genes in MCF-7 Cells

    Kalinina, T., Kononchuk, V., Klyushova, L. & Gulyaeva, L., Jan 2022, In: Toxics. 10, 1, 25.

    Research output: Contribution to journal › Article › peer-review

  51. ErbB4 Is a Potential Key Regulator of the Pathways Activated by NTRK-Fusions in Thyroid Cancer

    Kechin, A., Borobova, V., Kel, A., Ivanov, A. & Filipenko, M., 1 Mar 2022, In: Applied Sciences (Switzerland). 12, 5, 2506.

    Research output: Contribution to journal › Article › peer-review

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